RNA–Protein interactions for RNA: ENST00000521835.1

DENND3-217, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best)

Gene DENND3, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-217ENST00000521835 DYNLL2Q96FJ2 89 aa13.86□□□□□ -0.19
DENND3-217ENST00000521835 BAG1Q99933 345 aaPredicted RBP13.86□□□□□ -0.19
DENND3-217ENST00000521835 STX8Q9UNK0 236 aa13.86□□□□□ -0.19
DENND3-217ENST00000521835 CTNND2Q9UQB3 1225 aa13.86□□□□□ -0.19
DENND3-217ENST00000521835 AKAP11Q9UKA4 1901 aa13.85□□□□□ -0.19
DENND3-217ENST00000521835 A0A0U1RQJ8 604 aa13.85□□□□□ -0.19
DENND3-217ENST00000521835 USP17L8P0C7I0 530 aa13.85□□□□□ -0.19
DENND3-217ENST00000521835 GNAT2P19087 354 aa13.85□□□□□ -0.19
DENND3-217ENST00000521835 PTPREP23469 700 aa13.85□□□□□ -0.19
DENND3-217ENST00000521835 ATRIPQ8WXE1 791 aa13.85□□□□□ -0.19
DENND3-217ENST00000521835 UIMC1Q96RL1 719 aa13.85□□□□□ -0.19
DENND3-217ENST00000521835 ERCC3P19447 782 aa13.85□□□□□ -0.19
DENND3-217ENST00000521835 PTGDRQ13258 359 aa13.85□□□□□ -0.19
DENND3-217ENST00000521835 TXNRD3Q86VQ6 643 aa13.85□□□□□ -0.19
DENND3-217ENST00000521835 DZIP1Q86YF9 867 aaKnown RBP13.85□□□□□ -0.19
DENND3-217ENST00000521835 VSTM4Q8IW00 320 aa13.85□□□□□ -0.19
DENND3-217ENST00000521835 SLC44A5Q8NCS7 719 aa13.85□□□□□ -0.19
DENND3-217ENST00000521835 ANKIB1Q9P2G1 1089 aa13.85□□□□□ -0.19
DENND3-217ENST00000521835 ZNF652Q9Y2D9 606 aa13.85□□□□□ -0.19
DENND3-217ENST00000521835 WDR19Q8NEZ3 1342 aa13.85□□□□□ -0.19
DENND3-217ENST00000521835 IKBKBO14920 756 aa13.85□□□□□ -0.19
DENND3-217ENST00000521835 GOLGA8HP0CJ92 632 aa13.85□□□□□ -0.19
DENND3-217ENST00000521835 MECOMQ03112 1051 aa13.85□□□□□ -0.19
DENND3-217ENST00000521835 DIXDC1Q155Q3 683 aa13.85□□□□□ -0.19
DENND3-217ENST00000521835 TBC1D9BQ66K14 1250 aa13.85□□□□□ -0.19
DENND3-217ENST00000521835 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.85□□□□□ -0.19
DENND3-217ENST00000521835 UBXN4Q92575 508 aa13.85□□□□□ -0.19
DENND3-217ENST00000521835 ZNF512BQ96KM6 892 aaPredicted RBP13.85□□□□□ -0.19
DENND3-217ENST00000521835 BRMS1Q9HCU9 246 aa13.85□□□□□ -0.19
DENND3-217ENST00000521835 MINPP1Q9UNW1 487 aa13.85□□□□□ -0.19
DENND3-217ENST00000521835 SOWAHDA6NJG2 315 aa13.84□□□□□ -0.19
DENND3-217ENST00000521835 SEC31AO94979 1220 aaKnown RBP13.84□□□□□ -0.19
DENND3-217ENST00000521835 ERO1AQ96HE7 468 aa13.84□□□□□ -0.19
DENND3-217ENST00000521835 VPS16Q9H269 839 aa13.84□□□□□ -0.19
DENND3-217ENST00000521835 VAT1LQ9HCJ6 419 aa13.84□□□□□ -0.19
DENND3-217ENST00000521835 ABCC6O95255 1503 aa13.84□□□□□ -0.19
DENND3-217ENST00000521835 CLGNO14967 610 aa13.84□□□□□ -0.19
DENND3-217ENST00000521835 GNPATO15228 680 aa13.84□□□□□ -0.19
DENND3-217ENST00000521835 TFRCP02786 760 aaKnown RBP13.84□□□□□ -0.19
DENND3-217ENST00000521835 USP5P45974 858 aa13.84□□□□□ -0.19
DENND3-217ENST00000521835 ALX1Q15699 326 aa13.84□□□□□ -0.19
DENND3-217ENST00000521835 PARP10Q53GL7 1025 aa13.84□□□□□ -0.19
DENND3-217ENST00000521835 FAM84BQ96KN1 310 aaPredicted RBP13.84□□□□□ -0.19
DENND3-217ENST00000521835 TIGD1Q96MW7 591 aa13.84□□□□□ -0.19
DENND3-217ENST00000521835 WDR24Q96S15 920 aa13.84□□□□□ -0.19
DENND3-217ENST00000521835 PPP2R2CQ9Y2T4 447 aa13.84□□□□□ -0.19
DENND3-217ENST00000521835 ETF1P62495 437 aaKnown RBP13.83□□□□□ -0.19
DENND3-217ENST00000521835 TTC38Q5R3I4 469 aa13.83□□□□□ -0.19
DENND3-217ENST00000521835 ZNF397Q8NF99 534 aaPredicted RBP13.83□□□□□ -0.19
DENND3-217ENST00000521835 CNKSR2Q8WXI2 1034 aa13.83□□□□□ -0.19
DENND3-217ENST00000521835 C8orf37Q96NL8 207 aa13.83□□□□□ -0.19
DENND3-217ENST00000521835 PP2D1A8MPX8 630 aa13.83□□□□□ -0.2
DENND3-217ENST00000521835 POLR3GO15318 223 aaPredicted RBP13.83□□□□□ -0.2
DENND3-217ENST00000521835 RAD21O60216 631 aa13.83□□□□□ -0.2
DENND3-217ENST00000521835 CD44P16070 742 aaKnown RBP13.83□□□□□ -0.2
DENND3-217ENST00000521835 SLC20A2Q08357 652 aa13.83□□□□□ -0.2
DENND3-217ENST00000521835 RRAGBQ5VZM2 374 aa13.83□□□□□ -0.2
DENND3-217ENST00000521835 CTR9Q6PD62 1173 aa13.83□□□□□ -0.2
DENND3-217ENST00000521835 LINC00116Q8NCU8 138 aa13.83□□□□□ -0.2
DENND3-217ENST00000521835 ZNF384Q8TF68 577 aa13.83□□□□□ -0.2
DENND3-217ENST00000521835 CCDC12Q8WUD4 166 aaPredicted RBP13.83□□□□□ -0.2
DENND3-217ENST00000521835 BPIFA3Q9BQP9 254 aa13.83□□□□□ -0.2
DENND3-217ENST00000521835 FOXP1Q9H334 677 aaPredicted RBP13.83□□□□□ -0.2
DENND3-217ENST00000521835 CEP131Q9UPN4 1083 aa13.83□□□□□ -0.2
DENND3-217ENST00000521835 SLIT2O94813 1529 aa13.83□□□□□ -0.2
DENND3-217ENST00000521835 MYCNP04198 464 aaPredicted RBP13.83□□□□□ -0.2
DENND3-217ENST00000521835 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.83□□□□□ -0.2
DENND3-217ENST00000521835 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.83□□□□□ -0.2
DENND3-217ENST00000521835 SYNRGQ9UMZ2 1314 aa13.83□□□□□ -0.2
DENND3-217ENST00000521835 EP400Q96L91 3159 aa13.82□□□□□ -0.2
DENND3-217ENST00000521835 MMP14P50281 582 aa13.82□□□□□ -0.2
DENND3-217ENST00000521835 PKN1Q16512 942 aa13.82□□□□□ -0.2
DENND3-217ENST00000521835 SPECC1LQ69YQ0 1117 aa13.82□□□□□ -0.2
DENND3-217ENST00000521835 HEATR3Q7Z4Q2 680 aa13.82□□□□□ -0.2
DENND3-217ENST00000521835 PPFIBP1Q86W92 1011 aa13.82□□□□□ -0.2
DENND3-217ENST00000521835 SRBD1Q8N5C6 995 aaKnown RBP13.82□□□□□ -0.2
DENND3-217ENST00000521835 MED15Q96RN5 788 aa13.82□□□□□ -0.2
DENND3-217ENST00000521835 PUF60Q9UHX1 559 aaKnown RBP13.82□□□□□ -0.2
DENND3-217ENST00000521835 UBR2Q8IWV8 1755 aa13.82□□□□□ -0.2
DENND3-217ENST00000521835 USP17L3A6NCW0 530 aa13.82□□□□□ -0.2
DENND3-217ENST00000521835 USP17L4A6NCW7 530 aa13.82□□□□□ -0.2
DENND3-217ENST00000521835 FANCGO15287 622 aa13.82□□□□□ -0.2
DENND3-217ENST00000521835 ACTN4O43707 911 aaKnown RBP13.82□□□□□ -0.2
DENND3-217ENST00000521835 USP17L1Q7RTZ2 530 aa13.82□□□□□ -0.2
DENND3-217ENST00000521835 TMTC2Q8N394 836 aa13.82□□□□□ -0.2
DENND3-217ENST00000521835 IGSF22Q8N9C0 903 aa13.82□□□□□ -0.2
DENND3-217ENST00000521835 CCDC34Q96HJ3 373 aa13.82□□□□□ -0.2
DENND3-217ENST00000521835 RIOK1Q9BRS2 568 aaKnown RBP13.82□□□□□ -0.2
DENND3-217ENST00000521835 TAB2Q9NYJ8 693 aa13.82□□□□□ -0.2
DENND3-217ENST00000521835 SRPRBQ9Y5M8 271 aaKnown RBP13.82□□□□□ -0.2
DENND3-217ENST00000521835 TAF1P21675 1872 aa13.82□□□□□ -0.2
DENND3-217ENST00000521835 MKNK2Q9HBH9 465 aa13.81□□□□□ -0.2
DENND3-217ENST00000521835 MYH15Q9Y2K3 1946 aa13.81□□□□□ -0.2
DENND3-217ENST00000521835 RTL9Q8NET4 1388 aa13.81□□□□□ -0.2
DENND3-217ENST00000521835 CASQ1P31415 396 aa13.81□□□□□ -0.2
DENND3-217ENST00000521835 HIBADHP31937 336 aaKnown RBP13.81□□□□□ -0.2
DENND3-217ENST00000521835 SEC23AQ15436 765 aa13.81□□□□□ -0.2
DENND3-217ENST00000521835 STAG2Q8N3U4 1231 aa13.81□□□□□ -0.2
DENND3-217ENST00000521835 SETDB2Q96T68 719 aa13.81□□□□□ -0.2
DENND3-217ENST00000521835 ATRNO75882 1429 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms