RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, human

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSMD1-210	ENST00000521646	FLT3LG	P49771	235 aa		13.76	□□□□□ -0.21
CSMD1-210	ENST00000521646	PRMT2	P55345	433 aa		13.76	□□□□□ -0.21
CSMD1-210	ENST00000521646	TRIM32	Q13049	653 aa		13.76	□□□□□ -0.21
CSMD1-210	ENST00000521646	ARHGEF6	Q15052	776 aa		13.76	□□□□□ -0.21
CSMD1-210	ENST00000521646	GADL1	Q6ZQY3	521 aa		13.76	□□□□□ -0.21
CSMD1-210	ENST00000521646	RAET1E	Q8TD07	263 aa		13.76	□□□□□ -0.21
CSMD1-210	ENST00000521646	DIS3L	Q8TF46	1054 aa	Known RBP	13.76	□□□□□ -0.21
CSMD1-210	ENST00000521646	U2AF1L4	Q8WU68	220 aa	Known RBP	13.76	□□□□□ -0.21
CSMD1-210	ENST00000521646	PARK7	Q99497	189 aa	Known RBP	13.76	□□□□□ -0.21
CSMD1-210	ENST00000521646	RNF208	Q9H0X6	261 aa		13.76	□□□□□ -0.21
CSMD1-210	ENST00000521646	HMG20B	Q9P0W2	317 aa		13.76	□□□□□ -0.21
CSMD1-210	ENST00000521646	GPR75-ASB3	A0A0A6YYF3	556 aa		13.75	□□□□□ -0.21
CSMD1-210	ENST00000521646	PNMA6E	A0A0J9YXQ4	647 aa		13.75	□□□□□ -0.21
CSMD1-210	ENST00000521646	ZEB1	P37275	1124 aa	Predicted RBP	13.75	□□□□□ -0.21
CSMD1-210	ENST00000521646	RARS	P54136	660 aa	Known RBP	13.75	□□□□□ -0.21
CSMD1-210	ENST00000521646	ABCF2	Q9UG63	623 aa		13.75	□□□□□ -0.21
CSMD1-210	ENST00000521646	PDS5A	Q29RF7	1337 aa	Known RBP	13.74	□□□□□ -0.21
CSMD1-210	ENST00000521646	ADCY3	O60266	1144 aa		13.74	□□□□□ -0.21
CSMD1-210	ENST00000521646	INHA	P05111	366 aa		13.74	□□□□□ -0.21
CSMD1-210	ENST00000521646	FCGRT	P55899	365 aa		13.74	□□□□□ -0.21
CSMD1-210	ENST00000521646	ADGRA1	Q86SQ6	560 aa		13.74	□□□□□ -0.21
CSMD1-210	ENST00000521646	ANKRD13C	Q8N6S4	541 aa		13.74	□□□□□ -0.21
CSMD1-210	ENST00000521646	NSUN4	Q96CB9	384 aa	Known RBP	13.74	□□□□□ -0.21
CSMD1-210	ENST00000521646	DNAJC18	Q9H819	358 aa		13.74	□□□□□ -0.21
CSMD1-210	ENST00000521646	ZBTB7B	O15156	539 aa	Predicted RBP	13.73	□□□□□ -0.21
CSMD1-210	ENST00000521646	CTNND1	O60716	968 aa	Known RBP	13.73	□□□□□ -0.21
CSMD1-210	ENST00000521646	MCAM	P43121	646 aa		13.73	□□□□□ -0.21
CSMD1-210	ENST00000521646	MTX1	Q13505	466 aa		13.73	□□□□□ -0.21
CSMD1-210	ENST00000521646	DZIP1	Q86YF9	867 aa	Known RBP	13.73	□□□□□ -0.21
CSMD1-210	ENST00000521646	DPF3	Q92784	378 aa		13.73	□□□□□ -0.21
CSMD1-210	ENST00000521646	TMEM134	Q9H6X4	195 aa		13.73	□□□□□ -0.21
CSMD1-210	ENST00000521646	PAK6	Q9NQU5	681 aa	Predicted RBP	13.73	□□□□□ -0.21
CSMD1-210	ENST00000521646	EYS	Q5T1H1	3165 aa		13.72	□□□□□ -0.21
CSMD1-210	ENST00000521646	SRGAP3	O43295	1099 aa		13.72	□□□□□ -0.21
CSMD1-210	ENST00000521646	FARP2	O94887	1054 aa	Predicted RBP	13.72	□□□□□ -0.21
CSMD1-210	ENST00000521646	SGPL1	O95470	568 aa		13.72	□□□□□ -0.21
CSMD1-210	ENST00000521646	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.72	□□□□□ -0.21
CSMD1-210	ENST00000521646	PICK1	Q9NRD5	415 aa		13.72	□□□□□ -0.21
CSMD1-210	ENST00000521646	GNL3L	Q9NVN8	582 aa	Known RBP	13.72	□□□□□ -0.21
CSMD1-210	ENST00000521646	AGTPBP1	Q9UPW5	1226 aa		13.72	□□□□□ -0.21
CSMD1-210	ENST00000521646	UNC80	Q8N2C7	3258 aa		13.72	□□□□□ -0.21
CSMD1-210	ENST00000521646	TRIM27	P14373	513 aa		13.71	□□□□□ -0.21
CSMD1-210	ENST00000521646	ARID4A	P29374	1257 aa	Predicted RBP	13.71	□□□□□ -0.21
CSMD1-210	ENST00000521646	SPP2	Q13103	211 aa		13.71	□□□□□ -0.21
CSMD1-210	ENST00000521646	FASTKD5	Q7L8L6	764 aa	Known RBP	13.71	□□□□□ -0.21
CSMD1-210	ENST00000521646	PXYLP1	Q8TE99	480 aa		13.71	□□□□□ -0.21
CSMD1-210	ENST00000521646	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.71	□□□□□ -0.21
CSMD1-210	ENST00000521646	DEFB118	Q96PH6	123 aa		13.71	□□□□□ -0.21
CSMD1-210	ENST00000521646	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.71	□□□□□ -0.21
CSMD1-210	ENST00000521646	BIN2	Q9UBW5	565 aa	Predicted RBP	13.71	□□□□□ -0.21
CSMD1-210	ENST00000521646	GJD2	Q9UKL4	321 aa		13.71	□□□□□ -0.21
CSMD1-210	ENST00000521646	SLC45A1	Q9Y2W3	748 aa		13.71	□□□□□ -0.21
CSMD1-210	ENST00000521646	FOCAD	Q5VW36	1801 aa		13.71	□□□□□ -0.22
CSMD1-210	ENST00000521646	COL2A1	P02458	1487 aa	Predicted RBP	13.7	□□□□□ -0.22
CSMD1-210	ENST00000521646	GPR37	O15354	613 aa		13.7	□□□□□ -0.22
CSMD1-210	ENST00000521646	BCAR3	O75815	825 aa		13.7	□□□□□ -0.22
CSMD1-210	ENST00000521646	HOXD10	P28358	340 aa		13.7	□□□□□ -0.22
CSMD1-210	ENST00000521646	HMGCS2	P54868	508 aa		13.7	□□□□□ -0.22
CSMD1-210	ENST00000521646	IRF5	Q13568	498 aa		13.7	□□□□□ -0.22
CSMD1-210	ENST00000521646	SPATA5	Q8NB90	893 aa		13.7	□□□□□ -0.22
CSMD1-210	ENST00000521646	API5	Q9BZZ5	524 aa	Known RBP	13.7	□□□□□ -0.22
CSMD1-210	ENST00000521646	TXNRD2	Q9NNW7	524 aa		13.7	□□□□□ -0.22
CSMD1-210	ENST00000521646	MAST2	Q6P0Q8	1798 aa		13.69	□□□□□ -0.22
CSMD1-210	ENST00000521646	TNPO2	O14787	897 aa	Known RBP	13.69	□□□□□ -0.22
CSMD1-210	ENST00000521646	CAP2	P40123	477 aa		13.69	□□□□□ -0.22
CSMD1-210	ENST00000521646	ERICH6	Q7L0X2	663 aa		13.69	□□□□□ -0.22
CSMD1-210	ENST00000521646	PAWR	Q96IZ0	340 aa	Known RBP	13.69	□□□□□ -0.22
CSMD1-210	ENST00000521646	NEUROD6	Q96NK8	337 aa		13.69	□□□□□ -0.22
CSMD1-210	ENST00000521646	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.69	□□□□□ -0.22
CSMD1-210	ENST00000521646	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
CSMD1-210	ENST00000521646	SNRK	Q9NRH2	765 aa		13.69	□□□□□ -0.22
CSMD1-210	ENST00000521646	DDX60L	Q5H9U9	1706 aa	Known RBP	13.69	□□□□□ -0.22
CSMD1-210	ENST00000521646	UBXN2A	P68543	259 aa		13.68	□□□□□ -0.22
CSMD1-210	ENST00000521646	FAM110C	Q1W6H9	321 aa		13.68	□□□□□ -0.22
CSMD1-210	ENST00000521646	TJAP1	Q5JTD0	557 aa		13.68	□□□□□ -0.22
CSMD1-210	ENST00000521646	METTL3	Q86U44	580 aa	Known RBP	13.68	□□□□□ -0.22
CSMD1-210	ENST00000521646	ZGPAT	Q8N5A5	531 aa	Known RBP	13.68	□□□□□ -0.22
CSMD1-210	ENST00000521646	NKX2-3	Q8TAU0	364 aa		13.68	□□□□□ -0.22
CSMD1-210	ENST00000521646	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.68	□□□□□ -0.22
CSMD1-210	ENST00000521646	TRIB2	Q92519	343 aa		13.68	□□□□□ -0.22
CSMD1-210	ENST00000521646	MTR	Q99707	1265 aa		13.68	□□□□□ -0.22
CSMD1-210	ENST00000521646	TLR7	Q9NYK1	1049 aa	Known RBP	13.68	□□□□□ -0.22
CSMD1-210	ENST00000521646	STAP2	Q9UGK3	403 aa		13.68	□□□□□ -0.22
CSMD1-210	ENST00000521646	MVP	Q14764	893 aa	Known RBP	13.67	□□□□□ -0.22
CSMD1-210	ENST00000521646	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.67	□□□□□ -0.22
CSMD1-210	ENST00000521646	ZNF280C	Q8ND82	737 aa		13.67	□□□□□ -0.22
CSMD1-210	ENST00000521646	CLUAP1	Q96AJ1	413 aa		13.67	□□□□□ -0.22
CSMD1-210	ENST00000521646	DBNDD2	Q9BQY9	259 aa		13.67	□□□□□ -0.22
CSMD1-210	ENST00000521646	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
CSMD1-210	ENST00000521646	IL21	Q9HBE4	155 aa		13.67	□□□□□ -0.22
CSMD1-210	ENST00000521646	NDUFB9	Q9Y6M9	179 aa		13.67	□□□□□ -0.22
CSMD1-210	ENST00000521646	CYP2E1	P05181	493 aa	Predicted RBP	13.66	□□□□□ -0.22
CSMD1-210	ENST00000521646	CT47B1	P0C2W7	299 aa	Predicted RBP	13.66	□□□□□ -0.22
CSMD1-210	ENST00000521646	MTMR2	Q13614	643 aa		13.66	□□□□□ -0.22
CSMD1-210	ENST00000521646		Q3C1V9	767 aa		13.66	□□□□□ -0.22
CSMD1-210	ENST00000521646	SH3D19	Q5HYK7	790 aa		13.66	□□□□□ -0.22
CSMD1-210	ENST00000521646	ARHGAP45	Q92619	1136 aa		13.66	□□□□□ -0.22
CSMD1-210	ENST00000521646	PRR14	Q9BWN1	585 aa		13.66	□□□□□ -0.22
CSMD1-210	ENST00000521646	PIH1D3	Q9NQM4	214 aa	Known RBP	13.66	□□□□□ -0.22
CSMD1-210	ENST00000521646	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms