RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 LDHBP07195 334 aaKnown RBP13.01□□□□□ -0.33
MRPS28-208ENST00000521605 PABPC4Q13310 644 aaKnown RBP eCLIP13.01□□□□□ -0.335e-6■□□□□ 10.8
MRPS28-208ENST00000521605 ERICH6Q7L0X2 663 aa13.01□□□□□ -0.33
MRPS28-208ENST00000521605 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.01□□□□□ -0.33
MRPS28-208ENST00000521605 ESYT1Q9BSJ8 1104 aa13.01□□□□□ -0.33
MRPS28-208ENST00000521605 PRDM5Q9NQX1 630 aaPredicted RBP13.01□□□□□ -0.33
MRPS28-208ENST00000521605 SNRKQ9NRH2 765 aa13.01□□□□□ -0.33
MRPS28-208ENST00000521605 ATP11BQ9Y2G3 1177 aa13.01□□□□□ -0.33
MRPS28-208ENST00000521605 LTBP2Q14767 1821 aa13.01□□□□□ -0.33
MRPS28-208ENST00000521605 LOC285556D6RIA3 1793 aa13□□□□□ -0.33
MRPS28-208ENST00000521605 ENTPD3O75355 529 aa13□□□□□ -0.33
MRPS28-208ENST00000521605 ATP5JP18859 108 aa13□□□□□ -0.33
MRPS28-208ENST00000521605 PUM3Q15397 648 aaKnown RBP13□□□□□ -0.33
MRPS28-208ENST00000521605 AACSQ86V21 672 aa13□□□□□ -0.33
MRPS28-208ENST00000521605 SOCS4Q8WXH5 440 aa13□□□□□ -0.33
MRPS28-208ENST00000521605 EAF2Q96CJ1 260 aaPredicted RBP13□□□□□ -0.33
MRPS28-208ENST00000521605 EVI5LQ96CN4 794 aa13□□□□□ -0.33
MRPS28-208ENST00000521605 RAD50Q92878 1312 aa12.99□□□□□ -0.33
MRPS28-208ENST00000521605 XRCC5P13010 732 aaKnown RBP12.99□□□□□ -0.33
MRPS28-208ENST00000521605 RTP1P59025 263 aa12.99□□□□□ -0.33
MRPS28-208ENST00000521605 IRX3P78415 501 aaPredicted RBP12.99□□□□□ -0.33
MRPS28-208ENST00000521605 RABEP1Q15276 862 aa12.99□□□□□ -0.33
MRPS28-208ENST00000521605 TNNI3KQ59H18 835 aa12.99□□□□□ -0.33
MRPS28-208ENST00000521605 ATG9AQ7Z3C6 839 aa12.99□□□□□ -0.33
MRPS28-208ENST00000521605 CCAR1Q8IX12 1150 aaKnown RBP12.99□□□□□ -0.33
MRPS28-208ENST00000521605 ZNF280CQ8ND82 737 aa12.99□□□□□ -0.33
MRPS28-208ENST00000521605 DDX4Q9NQI0 724 aaKnown RBP12.99□□□□□ -0.33
MRPS28-208ENST00000521605 MORF4L1Q9UBU8 362 aa12.99□□□□□ -0.33
MRPS28-208ENST00000521605 FPGT-TNNI3KV9GXZ4 949 aa12.99□□□□□ -0.33
MRPS28-208ENST00000521605 FRMPD3Q5JV73 1810 aa12.99□□□□□ -0.33
MRPS28-208ENST00000521605 SLC5A1P13866 664 aa12.98□□□□□ -0.33
MRPS28-208ENST00000521605 FGFR2P21802 821 aa12.98□□□□□ -0.33
MRPS28-208ENST00000521605 CNGA1P29973 690 aa12.98□□□□□ -0.33
MRPS28-208ENST00000521605 SMAD3P84022 425 aaKnown RBP12.98□□□□□ -0.33
MRPS28-208ENST00000521605 MAP3K10Q02779 954 aa12.98□□□□□ -0.33
MRPS28-208ENST00000521605 TRMT44Q8IYL2 757 aaKnown RBP12.98□□□□□ -0.33
MRPS28-208ENST00000521605 RUFY2Q8WXA3 655 aa12.98□□□□□ -0.33
MRPS28-208ENST00000521605 PPM1EQ8WY54 764 aa12.98□□□□□ -0.33
MRPS28-208ENST00000521605 BADQ92934 168 aa12.98□□□□□ -0.33
MRPS28-208ENST00000521605 KIF2CQ99661 725 aa12.98□□□□□ -0.33
MRPS28-208ENST00000521605 IDI2Q9BXS1 227 aa12.98□□□□□ -0.33
MRPS28-208ENST00000521605 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.98□□□□□ -0.33
MRPS28-208ENST00000521605 CWC22Q9HCG8 908 aaKnown RBP12.98□□□□□ -0.33
MRPS28-208ENST00000521605 TXNRD2Q9NNW7 524 aa12.98□□□□□ -0.33
MRPS28-208ENST00000521605 AKAP2Q9Y2D5 859 aa12.98□□□□□ -0.33
MRPS28-208ENST00000521605 TRIM6-TRIM34B2RNG4 842 aa12.97□□□□□ -0.33
MRPS28-208ENST00000521605 SGSM2O43147 1006 aa12.97□□□□□ -0.33
MRPS28-208ENST00000521605 MCCP23508 829 aa12.97□□□□□ -0.33
MRPS28-208ENST00000521605 RGS2P41220 211 aa12.97□□□□□ -0.33
MRPS28-208ENST00000521605 MAP3K12Q12852 859 aa12.97□□□□□ -0.33
MRPS28-208ENST00000521605 GPRC5AQ8NFJ5 357 aa12.97□□□□□ -0.33
MRPS28-208ENST00000521605 P2RX7Q99572 595 aaKnown RBP12.97□□□□□ -0.33
MRPS28-208ENST00000521605 MYCNP04198 464 aaPredicted RBP12.96□□□□□ -0.33
MRPS28-208ENST00000521605 TFCP2Q12800 502 aa12.96□□□□□ -0.33
MRPS28-208ENST00000521605 GRIN2CQ14957 1233 aa12.96□□□□□ -0.33
MRPS28-208ENST00000521605 APBA2Q99767 749 aa12.96□□□□□ -0.33
MRPS28-208ENST00000521605 PAGR1Q9BTK6 254 aa12.96□□□□□ -0.33
MRPS28-208ENST00000521605 TBC1D2Q9BYX2 928 aa12.96□□□□□ -0.33
MRPS28-208ENST00000521605 PORCNQ9H237 461 aa12.96□□□□□ -0.33
MRPS28-208ENST00000521605 NDUFB9Q9Y6M9 179 aa12.96□□□□□ -0.33
MRPS28-208ENST00000521605 MYH2Q9UKX2 1941 aa12.96□□□□□ -0.34
MRPS28-208ENST00000521605 ATAD5Q96QE3 1844 aa12.95□□□□□ -0.34
MRPS28-208ENST00000521605 MAPK4P31152 587 aa12.95□□□□□ -0.34
MRPS28-208ENST00000521605 BTDP43251 543 aa12.95□□□□□ -0.34
MRPS28-208ENST00000521605 HERVK_113P62684 666 aa12.95□□□□□ -0.34
MRPS28-208ENST00000521605 MTMR2Q13614 643 aa12.95□□□□□ -0.34
MRPS28-208ENST00000521605 GJC2Q5T442 439 aaPredicted RBP12.95□□□□□ -0.34
MRPS28-208ENST00000521605 GPR142Q7Z601 462 aa12.95□□□□□ -0.34
MRPS28-208ENST00000521605 DZIP1Q86YF9 867 aaKnown RBP12.95□□□□□ -0.34
MRPS28-208ENST00000521605 HSCBQ8IWL3 235 aa12.95□□□□□ -0.34
MRPS28-208ENST00000521605 ADAMTS19Q8TE59 1207 aa12.95□□□□□ -0.34
MRPS28-208ENST00000521605 LPIN2Q92539 896 aa12.95□□□□□ -0.34
MRPS28-208ENST00000521605 USP6NLQ92738 828 aa12.95□□□□□ -0.34
MRPS28-208ENST00000521605 RILPL2Q969X0 211 aa12.95□□□□□ -0.34
MRPS28-208ENST00000521605 ZNF512BQ96KM6 892 aaPredicted RBP12.95□□□□□ -0.34
MRPS28-208ENST00000521605 SIL1Q9H173 461 aa12.95□□□□□ -0.34
MRPS28-208ENST00000521605 CEP126Q9P2H0 1117 aa12.95□□□□□ -0.34
MRPS28-208ENST00000521605 DDX20Q9UHI6 824 aaKnown RBP12.95□□□□□ -0.34
MRPS28-208ENST00000521605 DBNLQ9UJU6 430 aaKnown RBP12.95□□□□□ -0.34
MRPS28-208ENST00000521605 GAKO14976 1311 aa12.94□□□□□ -0.34
MRPS28-208ENST00000521605 USP17L5A8MUK1 530 aa12.94□□□□□ -0.34
MRPS28-208ENST00000521605 DNM1LO00429 736 aa12.94□□□□□ -0.34
MRPS28-208ENST00000521605 ZBTB22O15209 634 aa12.94□□□□□ -0.34
MRPS28-208ENST00000521605 MCM2P49736 904 aa12.94□□□□□ -0.34
MRPS28-208ENST00000521605 RRP1BQ14684 758 aaKnown RBP12.94□□□□□ -0.34
MRPS28-208ENST00000521605 Q3C1V9 767 aa12.94□□□□□ -0.34
MRPS28-208ENST00000521605 TRIM60Q495X7 471 aa12.94□□□□□ -0.34
MRPS28-208ENST00000521605 MORN1Q5T089 497 aa12.94□□□□□ -0.34
MRPS28-208ENST00000521605 WDR78Q5VTH9 848 aa12.94□□□□□ -0.34
MRPS28-208ENST00000521605 TSHZ3Q63HK5 1081 aa12.94□□□□□ -0.34
MRPS28-208ENST00000521605 PLEKHH3Q7Z736 793 aa12.94□□□□□ -0.34
MRPS28-208ENST00000521605 RNPC3Q96LT9 517 aaKnown RBP12.94□□□□□ -0.34
MRPS28-208ENST00000521605 HAUS7Q99871 368 aa12.94□□□□□ -0.34
MRPS28-208ENST00000521605 OSBPL5Q9H0X9 879 aaPredicted RBP12.94□□□□□ -0.34
MRPS28-208ENST00000521605 AS3MTQ9HBK9 375 aa12.94□□□□□ -0.34
MRPS28-208ENST00000521605 GNL3LQ9NVN8 582 aaKnown RBP12.94□□□□□ -0.34
MRPS28-208ENST00000521605 TMOD4Q9NZQ9 345 aa12.94□□□□□ -0.34
MRPS28-208ENST00000521605 FLRT1Q9NZU1 646 aa12.94□□□□□ -0.34
MRPS28-208ENST00000521605 RBPJLQ9UBG7 517 aa12.94□□□□□ -0.34
MRPS28-208ENST00000521605 CAP2P40123 477 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms