RNA–Protein interactions for RNA: ENST00000521122.1

PVT1-210, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 221 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-210ENST00000521122 CWC25Q9NXE8 425 aaPredicted RBP11.27□□□□□ -0.61
PVT1-210ENST00000521122 LMCD1Q9NZU5 365 aa11.27□□□□□ -0.61
PVT1-210ENST00000521122 A0A1W2PQ45 241 aaPredicted RBP11.26□□□□□ -0.61
PVT1-210ENST00000521122 A0A1W2PQY0 241 aa11.26□□□□□ -0.61
PVT1-210ENST00000521122 HOXC6P09630 235 aa11.26□□□□□ -0.61
PVT1-210ENST00000521122 ERVK-9P63128 1117 aa11.26□□□□□ -0.61
PVT1-210ENST00000521122 ERVK-24P63145 666 aa11.26□□□□□ -0.61
PVT1-210ENST00000521122 Q3C1V9 767 aa11.26□□□□□ -0.61
PVT1-210ENST00000521122 TMEM67Q5HYA8 995 aa11.26□□□□□ -0.61
PVT1-210ENST00000521122 CCDC84Q86UT8 332 aaPredicted RBP11.26□□□□□ -0.61
PVT1-210ENST00000521122 ADHFE1Q8IWW8 467 aa11.26□□□□□ -0.61
PVT1-210ENST00000521122 SLC4A7Q9Y6M7 1214 aa11.26□□□□□ -0.61
PVT1-210ENST00000521122 CTNND1O60716 968 aaKnown RBP11.25□□□□□ -0.61
PVT1-210ENST00000521122 HMGCS2P54868 508 aa11.25□□□□□ -0.61
PVT1-210ENST00000521122 VCPP55072 806 aaKnown RBP11.25□□□□□ -0.61
PVT1-210ENST00000521122 IRX3P78415 501 aaPredicted RBP11.25□□□□□ -0.61
PVT1-210ENST00000521122 TCP10Q12799 353 aa11.25□□□□□ -0.61
PVT1-210ENST00000521122 FAM47AQ5JRC9 791 aa11.25□□□□□ -0.61
PVT1-210ENST00000521122 OTOP2Q7RTS6 562 aa11.25□□□□□ -0.61
PVT1-210ENST00000521122 NKD2Q969F2 451 aaPredicted RBP11.25□□□□□ -0.61
PVT1-210ENST00000521122 MYD88Q99836 296 aa11.25□□□□□ -0.61
PVT1-210ENST00000521122 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.25□□□□□ -0.61
PVT1-210ENST00000521122 RBPJLQ9UBG7 517 aa11.25□□□□□ -0.61
PVT1-210ENST00000521122 GLRX3O76003 335 aaKnown RBP11.24□□□□□ -0.61
PVT1-210ENST00000521122 ATP2A2P16615 1042 aaKnown RBP11.24□□□□□ -0.61
PVT1-210ENST00000521122 ITGA6P23229 1130 aa11.24□□□□□ -0.61
PVT1-210ENST00000521122 NUBP1P53384 320 aa11.24□□□□□ -0.61
PVT1-210ENST00000521122 HERVK_113P62684 666 aa11.24□□□□□ -0.61
PVT1-210ENST00000521122 CWC22Q9HCG8 908 aaKnown RBP11.24□□□□□ -0.61
PVT1-210ENST00000521122 FAM50BQ9Y247 325 aa11.24□□□□□ -0.61
PVT1-210ENST00000521122 LRRFIP2Q9Y608 721 aaKnown RBP11.24□□□□□ -0.61
PVT1-210ENST00000521122 COL4A4P53420 1690 aaPredicted RBP11.24□□□□□ -0.61
PVT1-210ENST00000521122 A0A1B0GUL6 1792 aa11.23□□□□□ -0.61
PVT1-210ENST00000521122 SLC15A5A6NIM6 579 aa11.23□□□□□ -0.61
PVT1-210ENST00000521122 AVPR2P30518 371 aa11.23□□□□□ -0.61
PVT1-210ENST00000521122 TAP1Q03518 808 aa11.23□□□□□ -0.61
PVT1-210ENST00000521122 SPP2Q13103 211 aa11.23□□□□□ -0.61
PVT1-210ENST00000521122 NPLOC4Q8TAT6 608 aa11.23□□□□□ -0.61
PVT1-210ENST00000521122 NEK9Q8TD19 979 aa11.23□□□□□ -0.61
PVT1-210ENST00000521122 SH2B1Q9NRF2 756 aaPredicted RBP11.23□□□□□ -0.61
PVT1-210ENST00000521122 HYPKQ9NX55 129 aa11.23□□□□□ -0.61
PVT1-210ENST00000521122 NUDCQ9Y266 331 aa11.23□□□□□ -0.61
PVT1-210ENST00000521122 DOCK2Q92608 1830 aa11.23□□□□□ -0.61
PVT1-210ENST00000521122 HOXA7P31268 230 aaPredicted RBP11.22□□□□□ -0.61
PVT1-210ENST00000521122 MAP3K10Q02779 954 aa11.22□□□□□ -0.61
PVT1-210ENST00000521122 NFIAQ12857 509 aa11.22□□□□□ -0.61
PVT1-210ENST00000521122 SH3D19Q5HYK7 790 aa11.22□□□□□ -0.61
PVT1-210ENST00000521122 HHIPL2Q6UWX4 724 aa11.22□□□□□ -0.61
PVT1-210ENST00000521122 RNF180Q86T96 592 aa11.22□□□□□ -0.61
PVT1-210ENST00000521122 ZNF280CQ8ND82 737 aa11.22□□□□□ -0.61
PVT1-210ENST00000521122 PPP1R12CQ9BZL4 782 aa11.22□□□□□ -0.61
PVT1-210ENST00000521122 BABAM1Q9NWV8 329 aa11.22□□□□□ -0.61
PVT1-210ENST00000521122 MROH7Q68CQ1 1323 aa11.21□□□□□ -0.61
PVT1-210ENST00000521122 PTPREP23469 700 aa11.21□□□□□ -0.61
PVT1-210ENST00000521122 GOLGA2Q08379 1002 aa11.21□□□□□ -0.61
PVT1-210ENST00000521122 NBPF20Q3BBV1 942 aa11.21□□□□□ -0.61
PVT1-210ENST00000521122 OLFML2BQ68BL8 750 aa11.21□□□□□ -0.61
PVT1-210ENST00000521122 MCTP2Q6DN12 878 aa11.21□□□□□ -0.61
PVT1-210ENST00000521122 RNF135Q8IUD6 432 aa11.21□□□□□ -0.61
PVT1-210ENST00000521122 GTF3C2Q8WUA4 911 aaPredicted RBP11.21□□□□□ -0.61
PVT1-210ENST00000521122 TBC1D22AQ8WUA7 517 aa11.21□□□□□ -0.61
PVT1-210ENST00000521122 XPNPEP3Q9NQH7 507 aa11.21□□□□□ -0.61
PVT1-210ENST00000521122 STARD7Q9NQZ5 370 aa11.21□□□□□ -0.61
PVT1-210ENST00000521122 DLL3Q9NYJ7 618 aa11.21□□□□□ -0.61
PVT1-210ENST00000521122 FAM198AQ9UFP1 575 aa11.21□□□□□ -0.61
PVT1-210ENST00000521122 MAST3O60307 1309 aa11.2□□□□□ -0.62
PVT1-210ENST00000521122 H3BQ06 376 aaPredicted RBP11.2□□□□□ -0.62
PVT1-210ENST00000521122 GALR2O43603 387 aaPredicted RBP11.2□□□□□ -0.62
PVT1-210ENST00000521122 KDM4AO75164 1064 aa11.2□□□□□ -0.62
PVT1-210ENST00000521122 ARHGEF15O94989 841 aa11.2□□□□□ -0.62
PVT1-210ENST00000521122 HIBADHP31937 336 aaKnown RBP11.2□□□□□ -0.62
PVT1-210ENST00000521122 GRB14Q14449 540 aa11.2□□□□□ -0.62
PVT1-210ENST00000521122 NFE2L2Q16236 605 aa11.2□□□□□ -0.62
PVT1-210ENST00000521122 HDGFL1Q5TGJ6 251 aa11.2□□□□□ -0.62
PVT1-210ENST00000521122 FRMD5Q7Z6J6 570 aa11.2□□□□□ -0.62
PVT1-210ENST00000521122 ZFPM1Q8IX07 1006 aa11.2□□□□□ -0.62
PVT1-210ENST00000521122 POP1Q99575 1024 aaKnown RBP11.2□□□□□ -0.62
PVT1-210ENST00000521122 TBC1D2Q9BYX2 928 aa11.2□□□□□ -0.62
PVT1-210ENST00000521122 NDUFB9Q9Y6M9 179 aa11.2□□□□□ -0.62
PVT1-210ENST00000521122 SMCHD1A6NHR9 2005 aa11.19□□□□□ -0.62
PVT1-210ENST00000521122 ZBBXA8MT70 800 aa11.19□□□□□ -0.62
PVT1-210ENST00000521122 CYP2C18P33260 490 aa11.19□□□□□ -0.62
PVT1-210ENST00000521122 CC2D1BQ5T0F9 858 aaKnown RBP11.19□□□□□ -0.62
PVT1-210ENST00000521122 CDC42EP5Q6NZY7 148 aa11.19□□□□□ -0.62
PVT1-210ENST00000521122 GDPD5Q8WTR4 605 aa11.19□□□□□ -0.62
PVT1-210ENST00000521122 NUP133Q8WUM0 1156 aa11.19□□□□□ -0.62
PVT1-210ENST00000521122 PAGR1Q9BTK6 254 aa11.19□□□□□ -0.62
PVT1-210ENST00000521122 DACH1Q9UI36 760 aa11.19□□□□□ -0.62
PVT1-210ENST00000521122 RARBP10826 455 aa11.18□□□□□ -0.62
PVT1-210ENST00000521122 GYG1P46976 350 aa11.18□□□□□ -0.62
PVT1-210ENST00000521122 CDK7P50613 346 aa11.18□□□□□ -0.62
PVT1-210ENST00000521122 CCNA1P78396 465 aa11.18□□□□□ -0.62
PVT1-210ENST00000521122 FAM84BQ96KN1 310 aaPredicted RBP11.18□□□□□ -0.62
PVT1-210ENST00000521122 CFAP53Q96M91 514 aa11.18□□□□□ -0.62
PVT1-210ENST00000521122 TSEN34Q9BSV6 310 aaKnown RBP11.18□□□□□ -0.62
PVT1-210ENST00000521122 BPTFQ12830 3046 aa11.17□□□□□ -0.62
PVT1-210ENST00000521122 ZZEF1O43149 2961 aa11.17□□□□□ -0.62
PVT1-210ENST00000521122 PGK1P00558 417 aa11.17□□□□□ -0.62
PVT1-210ENST00000521122 ACLYP53396 1101 aa11.17□□□□□ -0.62
PVT1-210ENST00000521122 ZXDAP98168 799 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms