RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 MYH1P12882 1939 aa24.63■■□□□ 1.53
PABPC1-217ENST00000521067 GOLIM4O00461 696 aa24.63■■□□□ 1.53
PABPC1-217ENST00000521067 MAPK4P31152 587 aa24.63■■□□□ 1.53
PABPC1-217ENST00000521067 MORN1Q5T089 497 aa24.63■■□□□ 1.53
PABPC1-217ENST00000521067 GPR142Q7Z601 462 aa24.63■■□□□ 1.53
PABPC1-217ENST00000521067 NECAB2Q7Z6G3 386 aa24.63■■□□□ 1.53
PABPC1-217ENST00000521067 RPAP2Q8IXW5 612 aaPredicted RBP24.63■■□□□ 1.53
PABPC1-217ENST00000521067 CLASRPQ8N2M8 674 aaKnown RBP24.63■■□□□ 1.53
PABPC1-217ENST00000521067 KIF1BPQ96EK5 621 aa24.63■■□□□ 1.53
PABPC1-217ENST00000521067 KIAA1683Q9H0B3 1180 aa24.63■■□□□ 1.53
PABPC1-217ENST00000521067 ZNF532Q9HCE3 1301 aa24.62■■□□□ 1.53
PABPC1-217ENST00000521067 USP17L15C9J2P7 530 aa24.62■■□□□ 1.53
PABPC1-217ENST00000521067 USP17L13C9JLJ4 530 aa24.62■■□□□ 1.53
PABPC1-217ENST00000521067 USP17L11C9JVI0 530 aa24.62■■□□□ 1.53
PABPC1-217ENST00000521067 USP17L18D6R9N7 530 aa24.62■■□□□ 1.53
PABPC1-217ENST00000521067 USP17L22D6RA61 530 aa24.62■■□□□ 1.53
PABPC1-217ENST00000521067 USP17L17D6RBQ6 530 aa24.62■■□□□ 1.53
PABPC1-217ENST00000521067 USP17L19D6RCP7 530 aa24.62■■□□□ 1.53
PABPC1-217ENST00000521067 USP17L20D6RJB6 530 aa24.62■■□□□ 1.53
PABPC1-217ENST00000521067 PRKAR2AP13861 404 aaKnown RBP24.62■■□□□ 1.53
PABPC1-217ENST00000521067 USP17L24Q0WX57 530 aa24.62■■□□□ 1.53
PABPC1-217ENST00000521067 TTF1Q15361 905 aaPredicted RBP24.62■■□□□ 1.53
PABPC1-217ENST00000521067 CCL14Q16627 93 aa24.62■■□□□ 1.53
PABPC1-217ENST00000521067 SLFNL1Q499Z3 407 aa24.62■■□□□ 1.53
PABPC1-217ENST00000521067 CATSPERGQ6ZRH7 1159 aa24.62■■□□□ 1.53
PABPC1-217ENST00000521067 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.62■■□□□ 1.53
PABPC1-217ENST00000521067 SOCS4Q8WXH5 440 aa24.62■■□□□ 1.53
PABPC1-217ENST00000521067 FEZ1Q99689 392 aa24.62■■□□□ 1.53
PABPC1-217ENST00000521067 BCL11AQ9H165 835 aa24.62■■□□□ 1.53
PABPC1-217ENST00000521067 POLR3DP05423 398 aaPredicted RBP24.61■■□□□ 1.53
PABPC1-217ENST00000521067 VCAM1P19320 739 aa24.61■■□□□ 1.53
PABPC1-217ENST00000521067 PLEKHH3Q7Z736 793 aa24.61■■□□□ 1.53
PABPC1-217ENST00000521067 ANKLE1Q8NAG6 615 aa24.61■■□□□ 1.53
PABPC1-217ENST00000521067 GTF3C2Q8WUA4 911 aaPredicted RBP24.61■■□□□ 1.53
PABPC1-217ENST00000521067 SDR42E1Q8WUS8 393 aa24.61■■□□□ 1.53
PABPC1-217ENST00000521067 DNAJC2Q99543 621 aaKnown RBP24.61■■□□□ 1.53
PABPC1-217ENST00000521067 OGDHLQ9ULD0 1010 aa24.61■■□□□ 1.53
PABPC1-217ENST00000521067 RABGAP1Q9Y3P9 1069 aa24.61■■□□□ 1.53
PABPC1-217ENST00000521067 MS4A1P11836 297 aa24.6■■□□□ 1.53
PABPC1-217ENST00000521067 CACNB2Q08289 660 aaPredicted RBP24.6■■□□□ 1.53
PABPC1-217ENST00000521067 SEPT2Q15019 361 aa24.6■■□□□ 1.53
PABPC1-217ENST00000521067 LCORLQ8N3X6 602 aa24.6■■□□□ 1.53
PABPC1-217ENST00000521067 CABP5Q9NP86 173 aa24.6■■□□□ 1.53
PABPC1-217ENST00000521067 MCM9Q9NXL9 1143 aa24.6■■□□□ 1.53
PABPC1-217ENST00000521067 A0A1W2PRG0 241 aa24.59■■□□□ 1.53
PABPC1-217ENST00000521067 IFIT2P09913 472 aaKnown RBP24.59■■□□□ 1.53
PABPC1-217ENST00000521067 CYP2D6P10635 497 aa24.59■■□□□ 1.53
PABPC1-217ENST00000521067 USP14P54578 494 aa24.59■■□□□ 1.53
PABPC1-217ENST00000521067 PDE3AQ14432 1141 aa24.59■■□□□ 1.53
PABPC1-217ENST00000521067 CRNKL1Q9BZJ0 848 aaKnown RBP24.59■■□□□ 1.53
PABPC1-217ENST00000521067 DCP1AQ9NPI6 582 aaPredicted RBP24.59■■□□□ 1.53
PABPC1-217ENST00000521067 BTBD7Q9P203 1132 aa24.59■■□□□ 1.53
PABPC1-217ENST00000521067 STAP2Q9UGK3 403 aa24.59■■□□□ 1.53
PABPC1-217ENST00000521067 DDX19BQ9UMR2 479 aa24.59■■□□□ 1.53
PABPC1-217ENST00000521067 CHGBP05060 677 aa24.58■■□□□ 1.53
PABPC1-217ENST00000521067 CCAR1Q8IX12 1150 aaKnown RBP24.58■■□□□ 1.53
PABPC1-217ENST00000521067 NBPF3Q9H094 633 aa24.58■■□□□ 1.53
PABPC1-217ENST00000521067 BOLA2Q9H3K6 86 aa24.58■■□□□ 1.53
PABPC1-217ENST00000521067 SMIM22K7EJ46 135 aa24.57■■□□□ 1.52
PABPC1-217ENST00000521067 PRKAB2O43741 272 aa24.57■■□□□ 1.52
PABPC1-217ENST00000521067 ZKSCAN1P17029 563 aaPredicted RBP24.57■■□□□ 1.52
PABPC1-217ENST00000521067 CCND3P30281 292 aaPredicted RBP24.57■■□□□ 1.52
PABPC1-217ENST00000521067 RGS2P41220 211 aa24.57■■□□□ 1.52
PABPC1-217ENST00000521067 LHX8Q68G74 356 aa24.57■■□□□ 1.52
PABPC1-217ENST00000521067 LBX2Q6XYB7 198 aa24.57■■□□□ 1.52
PABPC1-217ENST00000521067 SLC44A5Q8NCS7 719 aa24.57■■□□□ 1.52
PABPC1-217ENST00000521067 RPAP3Q9H6T3 665 aaPredicted RBP24.57■■□□□ 1.52
PABPC1-217ENST00000521067 ARMT1Q9H993 441 aa24.57■■□□□ 1.52
PABPC1-217ENST00000521067 DNAH12Q6ZR08 3092 aa24.57■■□□□ 1.52
PABPC1-217ENST00000521067 RAB11FIP3O75154 756 aa24.56■■□□□ 1.52
PABPC1-217ENST00000521067 HMMRO75330 724 aa24.56■■□□□ 1.52
PABPC1-217ENST00000521067 DYNLL2Q96FJ2 89 aa24.56■■□□□ 1.52
PABPC1-217ENST00000521067 FLRT1Q9NZU1 646 aa24.56■■□□□ 1.52
PABPC1-217ENST00000521067 SPDYE16A6NNV3 312 aaPredicted RBP24.55■■□□□ 1.52
PABPC1-217ENST00000521067 MAP2K5Q13163 448 aa24.55■■□□□ 1.52
PABPC1-217ENST00000521067 KIAA1755Q5JYT7 1200 aa24.55■■□□□ 1.52
PABPC1-217ENST00000521067 SIAH1Q8IUQ4 282 aa24.55■■□□□ 1.52
PABPC1-217ENST00000521067 TRMT44Q8IYL2 757 aaKnown RBP24.55■■□□□ 1.52
PABPC1-217ENST00000521067 C7orf61Q8IZ16 206 aa24.55■■□□□ 1.52
PABPC1-217ENST00000521067 APBA2Q99767 749 aa24.55■■□□□ 1.52
PABPC1-217ENST00000521067 C11orf49Q9H6J7 331 aa24.55■■□□□ 1.52
PABPC1-217ENST00000521067 PAG1Q9NWQ8 432 aa24.55■■□□□ 1.52
PABPC1-217ENST00000521067 DDX60LQ5H9U9 1706 aaKnown RBP24.55■■□□□ 1.52
PABPC1-217ENST00000521067 ALPK3Q96L96 1907 aa24.55■■□□□ 1.52
PABPC1-217ENST00000521067 MPHOSPH10O00566 681 aaKnown RBP24.54■■□□□ 1.52
PABPC1-217ENST00000521067 ATP5JP18859 108 aa24.54■■□□□ 1.52
PABPC1-217ENST00000521067 PTPREP23469 700 aa24.54■■□□□ 1.52
PABPC1-217ENST00000521067 ADD2P35612 726 aa24.54■■□□□ 1.52
PABPC1-217ENST00000521067 C20orf194Q5TEA3 1177 aa24.54■■□□□ 1.52
PABPC1-217ENST00000521067 ZMYND8Q9ULU4 1186 aaPredicted RBP24.54■■□□□ 1.52
PABPC1-217ENST00000521067 PFASO15067 1338 aa24.54■■□□□ 1.52
PABPC1-217ENST00000521067 CCNA1P78396 465 aa24.53■■□□□ 1.52
PABPC1-217ENST00000521067 GDF15Q99988 308 aa24.53■■□□□ 1.52
PABPC1-217ENST00000521067 SOX1O00570 391 aaPredicted RBP24.52■■□□□ 1.52
PABPC1-217ENST00000521067 MBD4O95243 580 aa24.52■■□□□ 1.52
PABPC1-217ENST00000521067 WDR78Q5VTH9 848 aa24.52■■□□□ 1.52
PABPC1-217ENST00000521067 CLEC10AQ8IUN9 316 aa24.52■■□□□ 1.52
PABPC1-217ENST00000521067 HAUS7Q99871 368 aa24.52■■□□□ 1.52
PABPC1-217ENST00000521067 RCAN3Q9UKA8 241 aa24.52■■□□□ 1.52
PABPC1-217ENST00000521067 CYP2D7A0A087X1C5 515 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms