RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 LLPHQ9BRT6 129 aaKnown RBP11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 INO80Q9ULG1 1556 aaPredicted RBP11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 SBNO1A3KN83 1393 aa11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 EME2A4GXA9 379 aaPredicted RBP11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 RNF225M0QZC1 329 aaPredicted RBP11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 SYF2O95926 243 aaKnown RBP11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 TUBB4AP04350 444 aa11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 C11orf91Q3C1V1 193 aa11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 HDAC7Q8WUI4 952 aa11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 IL17RAQ96F46 866 aa11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 CHCHD3Q9NX63 227 aaKnown RBP11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 PSD3Q9NYI0 1048 aa11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 CDK12Q9NYV4 1490 aaPredicted RBP11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 NRXN1Q9ULB1 1477 aa11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 DLG5Q8TDM6 1919 aa11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 YEATS4O95619 227 aa11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 DDX58O95786 925 aaKnown RBP11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 HDGFP51858 240 aaKnown RBP11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 GUCY1A3Q02108 690 aa11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 USP4Q13107 963 aa11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 HHATQ5VTY9 493 aa11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 KCNV1Q6PIU1 500 aa11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 SELENOOQ9BVL4 669 aa11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 EFCAB6Q5THR3 1501 aa11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 POTEB2H3BUK9 544 aa11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 IDH1O75874 414 aaKnown RBP11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 OATP04181 439 aa11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 CDR1P51861 262 aa11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 SLC39A14Q15043 492 aa11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 IMMTQ16891 758 aaKnown RBP11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 RRAGBQ5VZM2 374 aa11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 NUTM2AQ8IVF1 878 aaPredicted RBP11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 ARL8AQ96BM9 186 aa11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 DUSP10Q9Y6W6 482 aa11.34□□□□□ -0.59
PDGFRB-207ENST00000520579 ADGRB3O60242 1522 aa11.33□□□□□ -0.6
PDGFRB-207ENST00000520579 GOLGA8AA7E2F4 631 aa11.33□□□□□ -0.6
PDGFRB-207ENST00000520579 KIF4AO95239 1232 aa11.33□□□□□ -0.6
PDGFRB-207ENST00000520579 PYGLP06737 847 aa11.33□□□□□ -0.6
PDGFRB-207ENST00000520579 GBP2P32456 591 aaPredicted RBP11.33□□□□□ -0.6
PDGFRB-207ENST00000520579 IARSP41252 1262 aaKnown RBP11.33□□□□□ -0.6
PDGFRB-207ENST00000520579 FAM205CA6NFA0 338 aa11.33□□□□□ -0.6
PDGFRB-207ENST00000520579 PIP4K2BP78356 416 aa11.33□□□□□ -0.6
PDGFRB-207ENST00000520579 EPSTI1Q96J88 318 aa11.33□□□□□ -0.6
PDGFRB-207ENST00000520579 HPCAL4Q9UM19 191 aa11.33□□□□□ -0.6
PDGFRB-207ENST00000520579 METP08581 1390 aa11.33□□□□□ -0.6
PDGFRB-207ENST00000520579 PTPRMP28827 1452 aa11.33□□□□□ -0.6
PDGFRB-207ENST00000520579 ZC3H13Q5T200 1668 aaKnown RBP11.33□□□□□ -0.6
PDGFRB-207ENST00000520579 MED23Q9ULK4 1368 aa11.33□□□□□ -0.6
PDGFRB-207ENST00000520579 UBXN1Q04323 297 aa11.33□□□□□ -0.6
PDGFRB-207ENST00000520579 TBC1D8BQ0IIM8 1120 aa11.33□□□□□ -0.6
PDGFRB-207ENST00000520579 MAATS1Q7Z4T9 603 aa11.33□□□□□ -0.6
PDGFRB-207ENST00000520579 OSBP2Q969R2 916 aa11.33□□□□□ -0.6
PDGFRB-207ENST00000520579 CCDC114Q96M63 670 aa11.33□□□□□ -0.6
PDGFRB-207ENST00000520579 CABP5Q9NP86 173 aa11.33□□□□□ -0.6
PDGFRB-207ENST00000520579 MAST3O60307 1309 aa11.32□□□□□ -0.6
PDGFRB-207ENST00000520579 ZNF213O14771 459 aa11.32□□□□□ -0.6
PDGFRB-207ENST00000520579 IDEP14735 1019 aa11.32□□□□□ -0.6
PDGFRB-207ENST00000520579 GCFC2P16383 781 aaKnown RBP11.32□□□□□ -0.6
PDGFRB-207ENST00000520579 INHBEP58166 350 aa11.32□□□□□ -0.6
PDGFRB-207ENST00000520579 KSR1Q8IVT5 923 aa11.32□□□□□ -0.6
PDGFRB-207ENST00000520579 NKX2-3Q8TAU0 364 aa11.32□□□□□ -0.6
PDGFRB-207ENST00000520579 POLR3EQ9NVU0 708 aa11.32□□□□□ -0.6
PDGFRB-207ENST00000520579 KRT14P02533 472 aa11.32□□□□□ -0.6
PDGFRB-207ENST00000520579 CA8P35219 290 aa11.32□□□□□ -0.6
PDGFRB-207ENST00000520579 SAFBQ15424 915 aaKnown RBP eCLIP11.32□□□□□ -0.6
PDGFRB-207ENST00000520579 DBN1Q16643 649 aa11.32□□□□□ -0.6
PDGFRB-207ENST00000520579 CCDC181Q5TID7 509 aa11.32□□□□□ -0.6
PDGFRB-207ENST00000520579 TSHZ1Q6ZSZ6 1077 aa11.32□□□□□ -0.6
PDGFRB-207ENST00000520579 LINS1Q8NG48 757 aa11.32□□□□□ -0.6
PDGFRB-207ENST00000520579 COQ9O75208 318 aa11.32□□□□□ -0.6
PDGFRB-207ENST00000520579 ERVK-24P63145 666 aa11.32□□□□□ -0.6
PDGFRB-207ENST00000520579 LRRC24Q50LG9 513 aa11.32□□□□□ -0.6
PDGFRB-207ENST00000520579 KBTBD3Q8NAB2 608 aa11.32□□□□□ -0.6
PDGFRB-207ENST00000520579 MAF1Q9H063 256 aa11.32□□□□□ -0.6
PDGFRB-207ENST00000520579 SYNRGQ9UMZ2 1314 aa11.31□□□□□ -0.6
PDGFRB-207ENST00000520579 SNUPNO95149 360 aaKnown RBP11.31□□□□□ -0.6
PDGFRB-207ENST00000520579 FGAP02671 866 aa11.31□□□□□ -0.6
PDGFRB-207ENST00000520579 IGKV5-2P06315 115 aa11.31□□□□□ -0.6
PDGFRB-207ENST00000520579 PDHBP11177 359 aa11.31□□□□□ -0.6
PDGFRB-207ENST00000520579 GUCY1A2P33402 732 aa11.31□□□□□ -0.6
PDGFRB-207ENST00000520579 SLC4A8Q2Y0W8 1093 aa11.31□□□□□ -0.6
PDGFRB-207ENST00000520579 KRI1Q8N9T8 703 aaKnown RBP11.31□□□□□ -0.6
PDGFRB-207ENST00000520579 JAKMIP2Q96AA8 810 aa11.31□□□□□ -0.6
PDGFRB-207ENST00000520579 PUS3Q9BZE2 481 aaKnown RBP11.31□□□□□ -0.6
PDGFRB-207ENST00000520579 PCDHB6Q9Y5E3 794 aa11.31□□□□□ -0.6
PDGFRB-207ENST00000520579 KIAA1210Q9ULL0 1709 aa11.31□□□□□ -0.6
PDGFRB-207ENST00000520579 NEDD4P46934 1319 aa11.31□□□□□ -0.6
PDGFRB-207ENST00000520579 GOLGA6L7A0A1B0GV03 622 aa11.31□□□□□ -0.6
PDGFRB-207ENST00000520579 UPP2O95045 317 aa11.31□□□□□ -0.6
PDGFRB-207ENST00000520579 ODF2Q5BJF6 829 aa11.31□□□□□ -0.6
PDGFRB-207ENST00000520579 ARMC9Q7Z3E5 817 aa11.31□□□□□ -0.6
PDGFRB-207ENST00000520579 CDHR2Q9BYE9 1310 aa11.31□□□□□ -0.6
PDGFRB-207ENST00000520579 A0A0G2JS52 829 aa11.31□□□□□ -0.6
PDGFRB-207ENST00000520579 MYO1BO43795 1136 aa11.31□□□□□ -0.6
PDGFRB-207ENST00000520579 PRDM1O75626 825 aa11.31□□□□□ -0.6
PDGFRB-207ENST00000520579 HOXC9P31274 260 aa11.31□□□□□ -0.6
PDGFRB-207ENST00000520579 DIS3L2Q8IYB7 885 aaKnown RBP11.31□□□□□ -0.6
PDGFRB-207ENST00000520579 SAR1BQ9Y6B6 198 aa11.31□□□□□ -0.6
PDGFRB-207ENST00000520579 RIMS1Q86UR5 1692 aaKnown RBP11.3□□□□□ -0.6
PDGFRB-207ENST00000520579 E7EVH7 732 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms