RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 CST3P01034 146 aaPredicted RBP6.7□□□□□ -1.34
SQLE-204ENST00000520493 CDK8P49336 464 aa6.7□□□□□ -1.34
SQLE-204ENST00000520493 NKG7Q16617 165 aa6.7□□□□□ -1.34
SQLE-204ENST00000520493 SFRP5Q5T4F7 317 aa6.7□□□□□ -1.34
SQLE-204ENST00000520493 PRAMEF13Q5VWM6 474 aa6.7□□□□□ -1.34
SQLE-204ENST00000520493 LETMD1Q6P1Q0 360 aa6.7□□□□□ -1.34
SQLE-204ENST00000520493 SYDE1Q6ZW31 735 aaPredicted RBP6.7□□□□□ -1.34
SQLE-204ENST00000520493 FAM214BQ7L5A3 538 aa6.7□□□□□ -1.34
SQLE-204ENST00000520493 U3KQE9 123 aa6.7□□□□□ -1.34
SQLE-204ENST00000520493 GBP2P32456 591 aaPredicted RBP6.69□□□□□ -1.34
SQLE-204ENST00000520493 LMNB2Q03252 620 aa6.69□□□□□ -1.34
SQLE-204ENST00000520493 IKZF1Q13422 519 aa6.69□□□□□ -1.34
SQLE-204ENST00000520493 SPACA3Q8IXA5 215 aa6.69□□□□□ -1.34
SQLE-204ENST00000520493 MFSD4AQ8N468 514 aa6.69□□□□□ -1.34
SQLE-204ENST00000520493 ADAM30Q9UKF2 790 aa6.69□□□□□ -1.34
SQLE-204ENST00000520493 ZNF503-AS2A6NEH8 195 aa6.68□□□□□ -1.34
SQLE-204ENST00000520493 CD96P40200 585 aa6.68□□□□□ -1.34
SQLE-204ENST00000520493 CAMK2GQ13555 558 aaPredicted RBP6.68□□□□□ -1.34
SQLE-204ENST00000520493 SNAP47Q5SQN1 464 aa6.68□□□□□ -1.34
SQLE-204ENST00000520493 SLC6A19Q695T7 634 aa6.68□□□□□ -1.34
SQLE-204ENST00000520493 C22orf34Q6ZV56 151 aa6.68□□□□□ -1.34
SQLE-204ENST00000520493 ZSWIM9Q86XI8 627 aa6.68□□□□□ -1.34
SQLE-204ENST00000520493 MRPL41Q8IXM3 137 aaKnown RBP6.68□□□□□ -1.34
SQLE-204ENST00000520493 GIPC2Q8TF65 315 aa6.68□□□□□ -1.34
SQLE-204ENST00000520493 XAGE3Q8WTP9 111 aa6.68□□□□□ -1.34
SQLE-204ENST00000520493 TMEM87BQ96K49 555 aa6.68□□□□□ -1.34
SQLE-204ENST00000520493 TMEM74Q96NL1 305 aa6.68□□□□□ -1.34
SQLE-204ENST00000520493 RSRP1Q9BUV0 290 aa6.68□□□□□ -1.34
SQLE-204ENST00000520493 ETV3P41162 512 aa6.67□□□□□ -1.34
SQLE-204ENST00000520493 KIR3DL1P43629 444 aa6.67□□□□□ -1.34
SQLE-204ENST00000520493 YARSP54577 528 aaKnown RBP6.67□□□□□ -1.34
SQLE-204ENST00000520493 TAGLNQ01995 201 aaKnown RBP6.67□□□□□ -1.34
SQLE-204ENST00000520493 NKPD1Q17RQ9 610 aa6.67□□□□□ -1.34
SQLE-204ENST00000520493 GATAD2BQ8WXI9 593 aa6.67□□□□□ -1.34
SQLE-204ENST00000520493 F6X3S4 739 aa6.66□□□□□ -1.34
SQLE-204ENST00000520493 PF4P02776 101 aa6.66□□□□□ -1.34
SQLE-204ENST00000520493 C1QTNF9P0C862 333 aa6.66□□□□□ -1.34
SQLE-204ENST00000520493 PLCG1P19174 1290 aa6.66□□□□□ -1.34
SQLE-204ENST00000520493 KCNMB1Q16558 191 aa6.66□□□□□ -1.34
SQLE-204ENST00000520493 SLC23A3Q6PIS1 610 aa6.66□□□□□ -1.34
SQLE-204ENST00000520493 BNC2Q6ZN30 1099 aaPredicted RBP6.66□□□□□ -1.34
SQLE-204ENST00000520493 MCATQ8IVS2 390 aaKnown RBP6.66□□□□□ -1.34
SQLE-204ENST00000520493 LIN37Q96GY3 246 aaPredicted RBP6.66□□□□□ -1.34
SQLE-204ENST00000520493 DPH2Q9BQC3 489 aaPredicted RBP6.66□□□□□ -1.34
SQLE-204ENST00000520493 TJP2Q9UDY2 1190 aa6.66□□□□□ -1.34
SQLE-204ENST00000520493 CILPO75339 1184 aa6.65□□□□□ -1.34
SQLE-204ENST00000520493 CBX7O95931 251 aa6.65□□□□□ -1.34
SQLE-204ENST00000520493 ZP2Q05996 745 aa6.65□□□□□ -1.34
SQLE-204ENST00000520493 CDKAL1Q5VV42 579 aa6.65□□□□□ -1.34
SQLE-204ENST00000520493 FAM13CQ8NE31 585 aa6.65□□□□□ -1.34
SQLE-204ENST00000520493 PITPNM2Q9BZ72 1349 aa6.65□□□□□ -1.35
SQLE-204ENST00000520493 MINDY4BA8MYZ0 360 aa6.64□□□□□ -1.35
SQLE-204ENST00000520493 F13A1P00488 732 aa6.64□□□□□ -1.35
SQLE-204ENST00000520493 MLECQ14165 292 aa6.64□□□□□ -1.35
SQLE-204ENST00000520493 CDH24Q86UP0 819 aa6.64□□□□□ -1.35
SQLE-204ENST00000520493 GOLM1Q8NBJ4 401 aa6.64□□□□□ -1.35
SQLE-204ENST00000520493 ZNF428Q96B54 188 aa6.64□□□□□ -1.35
SQLE-204ENST00000520493 ACSF2Q96CM8 615 aaPredicted RBP6.64□□□□□ -1.35
SQLE-204ENST00000520493 RHOVQ96L33 236 aa6.64□□□□□ -1.35
SQLE-204ENST00000520493 CAPN6Q9Y6Q1 641 aa6.64□□□□□ -1.35
SQLE-204ENST00000520493 FAM221AA4D161 298 aa6.63□□□□□ -1.35
SQLE-204ENST00000520493 NFIBO00712 420 aa6.63□□□□□ -1.35
SQLE-204ENST00000520493 CHMP4BP1P59074 171 aa6.63□□□□□ -1.35
SQLE-204ENST00000520493 FAM160A1Q05DH4 1040 aa6.63□□□□□ -1.35
SQLE-204ENST00000520493 MPP2Q14168 576 aa6.63□□□□□ -1.35
SQLE-204ENST00000520493 DBX2Q6ZNG2 339 aa6.63□□□□□ -1.35
SQLE-204ENST00000520493 THAP5Q7Z6K1 395 aa6.63□□□□□ -1.35
SQLE-204ENST00000520493 RIN3Q8TB24 985 aa6.63□□□□□ -1.35
SQLE-204ENST00000520493 CYB5D2Q8WUJ1 264 aa6.63□□□□□ -1.35
SQLE-204ENST00000520493 RELTQ969Z4 430 aa6.63□□□□□ -1.35
SQLE-204ENST00000520493 C20orf173Q96LM9 149 aa6.63□□□□□ -1.35
SQLE-204ENST00000520493 HSPA12BQ96MM6 686 aa6.63□□□□□ -1.35
SQLE-204ENST00000520493 PRR33A8MZF0 331 aa6.62□□□□□ -1.35
SQLE-204ENST00000520493 NPIPB6E9PJ23 425 aa6.62□□□□□ -1.35
SQLE-204ENST00000520493 H3BS24 57 aa6.62□□□□□ -1.35
SQLE-204ENST00000520493 HOXA5P20719 270 aa6.62□□□□□ -1.35
SQLE-204ENST00000520493 CWF19L2Q2TBE0 894 aaKnown RBP6.62□□□□□ -1.35
SQLE-204ENST00000520493 HS2ST1Q7LGA3 356 aa6.62□□□□□ -1.35
SQLE-204ENST00000520493 AMIGO3Q86WK7 504 aa6.62□□□□□ -1.35
SQLE-204ENST00000520493 PIWIL2Q8TC59 973 aaKnown RBP6.62□□□□□ -1.35
SQLE-204ENST00000520493 CCDC120Q96HB5 630 aa6.62□□□□□ -1.35
SQLE-204ENST00000520493 KBTBD4Q9NVX7 518 aa6.62□□□□□ -1.35
SQLE-204ENST00000520493 CORINQ9Y5Q5 1042 aa6.62□□□□□ -1.35
SQLE-204ENST00000520493 ZNF16P17020 682 aaPredicted RBP6.61□□□□□ -1.35
SQLE-204ENST00000520493 VAMP1P23763 118 aa6.61□□□□□ -1.35
SQLE-204ENST00000520493 TNNI2P48788 182 aa6.61□□□□□ -1.35
SQLE-204ENST00000520493 TMEM201Q5SNT2 666 aa6.61□□□□□ -1.35
SQLE-204ENST00000520493 PRR23BQ6ZRT6 265 aa6.61□□□□□ -1.35
SQLE-204ENST00000520493 ERMP1Q7Z2K6 904 aa6.61□□□□□ -1.35
SQLE-204ENST00000520493 CARS2Q9HA77 564 aaKnown RBP6.61□□□□□ -1.35
SQLE-204ENST00000520493 ATP13A1Q9HD20 1204 aa6.61□□□□□ -1.35
SQLE-204ENST00000520493 GGT7Q9UJ14 662 aa6.61□□□□□ -1.35
SQLE-204ENST00000520493 KCNH3Q9ULD8 1083 aa6.61□□□□□ -1.35
SQLE-204ENST00000520493 CEP131Q9UPN4 1083 aa6.61□□□□□ -1.35
SQLE-204ENST00000520493 SUPT16HQ9Y5B9 1047 aaKnown RBP6.61□□□□□ -1.35
SQLE-204ENST00000520493 ST14Q9Y5Y6 855 aa6.61□□□□□ -1.35
SQLE-204ENST00000520493 ROBO2Q9HCK4 1378 aa6.6□□□□□ -1.35
SQLE-204ENST00000520493 FAM196AQ6ZSG2 479 aa6.6□□□□□ -1.35
SQLE-204ENST00000520493 REC114Q7Z4M0 266 aa6.6□□□□□ -1.35
SQLE-204ENST00000520493 SLFN12Q8IYM2 578 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms