RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 USP17L11C9JVI0 530 aa15.06■□□□□ 0
CSMD1-205ENST00000519623 USP17L18D6R9N7 530 aa15.06■□□□□ 0
CSMD1-205ENST00000519623 USP17L22D6RA61 530 aa15.06■□□□□ 0
CSMD1-205ENST00000519623 USP17L17D6RBQ6 530 aa15.06■□□□□ 0
CSMD1-205ENST00000519623 USP17L19D6RCP7 530 aa15.06■□□□□ 0
CSMD1-205ENST00000519623 USP17L20D6RJB6 530 aa15.06■□□□□ 0
CSMD1-205ENST00000519623 FARP2O94887 1054 aaPredicted RBP15.06■□□□□ 0
CSMD1-205ENST00000519623 HMGCRP04035 888 aa15.06■□□□□ 0
CSMD1-205ENST00000519623 ADD2P35612 726 aa15.06■□□□□ 0
CSMD1-205ENST00000519623 ERVK-9P63128 1117 aa15.06■□□□□ 0
CSMD1-205ENST00000519623 ERVK-24P63145 666 aa15.06■□□□□ 0
CSMD1-205ENST00000519623 USP17L24Q0WX57 530 aa15.06■□□□□ 0
CSMD1-205ENST00000519623 TRIM32Q13049 653 aa15.06■□□□□ 0
CSMD1-205ENST00000519623 ZYXQ15942 572 aaKnown RBP15.06■□□□□ 0
CSMD1-205ENST00000519623 CATSPERGQ6ZRH7 1159 aa15.06■□□□□ 0
CSMD1-205ENST00000519623 USP6NLQ92738 828 aa15.06■□□□□ 0
CSMD1-205ENST00000519623 HAUS7Q99871 368 aa15.06■□□□□ 0
CSMD1-205ENST00000519623 CABP5Q9NP86 173 aa15.06■□□□□ 0
CSMD1-205ENST00000519623 CNMDO75829 334 aa15.05■□□□□ -0
CSMD1-205ENST00000519623 CHGBP05060 677 aa15.05■□□□□ -0
CSMD1-205ENST00000519623 CYP2D6P10635 497 aa15.05■□□□□ -0
CSMD1-205ENST00000519623 CYP2B6P20813 491 aa15.05■□□□□ -0
CSMD1-205ENST00000519623 MAPK4P31152 587 aa15.05■□□□□ -0
CSMD1-205ENST00000519623 USP14P54578 494 aa15.05■□□□□ -0
CSMD1-205ENST00000519623 SEPT2Q15019 361 aa15.05■□□□□ -0
CSMD1-205ENST00000519623 GTF3C2Q8WUA4 911 aaPredicted RBP15.05■□□□□ -0
CSMD1-205ENST00000519623 HTATIP2Q9BUP3 242 aa15.05■□□□□ -0
CSMD1-205ENST00000519623 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.05■□□□□ -0
CSMD1-205ENST00000519623 PORCNQ9H237 461 aa15.05■□□□□ -0
CSMD1-205ENST00000519623 ARMT1Q9H993 441 aa15.05■□□□□ -0
CSMD1-205ENST00000519623 PCDH10Q9P2E7 1040 aa15.05■□□□□ -0
CSMD1-205ENST00000519623 TRIOBPQ9H2D6 2365 aa15.04■□□□□ -0
CSMD1-205ENST00000519623 NAV1Q8NEY1 1877 aa15.04■□□□□ -0
CSMD1-205ENST00000519623 RPTORQ8N122 1335 aa15.04■□□□□ -0
CSMD1-205ENST00000519623 PRKAB2O43741 272 aa15.04■□□□□ -0
CSMD1-205ENST00000519623 SMARCA5O60264 1052 aaPredicted RBP15.04■□□□□ -0
CSMD1-205ENST00000519623 XRCC5P13010 732 aaKnown RBP15.04■□□□□ -0
CSMD1-205ENST00000519623 VCAM1P19320 739 aa15.04■□□□□ -0
CSMD1-205ENST00000519623 MORN1Q5T089 497 aa15.04■□□□□ -0
CSMD1-205ENST00000519623 TRIB2Q92519 343 aa15.04■□□□□ -0
CSMD1-205ENST00000519623 FEZ1Q99689 392 aa15.04■□□□□ -0
CSMD1-205ENST00000519623 NUDT12Q9BQG2 462 aa15.04■□□□□ -0
CSMD1-205ENST00000519623 PAGR1Q9BTK6 254 aa15.04■□□□□ -0
CSMD1-205ENST00000519623 LRRCC1Q9C099 1032 aa15.04■□□□□ -0
CSMD1-205ENST00000519623 RABGAP1Q9Y3P9 1069 aa15.04■□□□□ -0
CSMD1-205ENST00000519623 A0A1W2PRG0 241 aa15.03■□□□□ -0
CSMD1-205ENST00000519623 MBD4O95243 580 aa15.03■□□□□ -0
CSMD1-205ENST00000519623 UBE3CQ15386 1083 aa15.03■□□□□ -0
CSMD1-205ENST00000519623 MAP3K21Q5TCX8 1036 aa15.03■□□□□ -0
CSMD1-205ENST00000519623 LBX2Q6XYB7 198 aa15.03■□□□□ -0
CSMD1-205ENST00000519623 GPR142Q7Z601 462 aa15.03■□□□□ -0
CSMD1-205ENST00000519623 SLC44A5Q8NCS7 719 aa15.03■□□□□ -0
CSMD1-205ENST00000519623 DYNLL2Q96FJ2 89 aa15.03■□□□□ -0
CSMD1-205ENST00000519623 HMX1Q9NP08 348 aaPredicted RBP15.03■□□□□ -0
CSMD1-205ENST00000519623 ATP8A2Q9NTI2 1148 aa15.03■□□□□ -0
CSMD1-205ENST00000519623 SMIM22K7EJ46 135 aa15.02■□□□□ -0
CSMD1-205ENST00000519623 FXR1P51114 621 aaKnown RBP eCLIP15.02■□□□□ -0
CSMD1-205ENST00000519623 PLEKHH3Q7Z736 793 aa15.02■□□□□ -0
CSMD1-205ENST00000519623 SIAH1Q8IUQ4 282 aa15.02■□□□□ -0
CSMD1-205ENST00000519623 SOCS4Q8WXH5 440 aa15.02■□□□□ -0
CSMD1-205ENST00000519623 PAWRQ96IZ0 340 aaKnown RBP15.02■□□□□ -0
CSMD1-205ENST00000519623 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.02■□□□□ -0
CSMD1-205ENST00000519623 DCTPP1Q9H773 170 aa15.02■□□□□ -0
CSMD1-205ENST00000519623 BAZ2AQ9UIF9 1905 aaKnown RBP15.02□□□□□ -0.01
CSMD1-205ENST00000519623 MPHOSPH10O00566 681 aaKnown RBP15.01□□□□□ -0.01
CSMD1-205ENST00000519623 MNX1P50219 401 aaPredicted RBP15.01□□□□□ -0.01
CSMD1-205ENST00000519623 KIAA1755Q5JYT7 1200 aa15.01□□□□□ -0.01
CSMD1-205ENST00000519623 C12orf60Q5U649 245 aa15.01□□□□□ -0.01
CSMD1-205ENST00000519623 CCAR1Q8IX12 1150 aaKnown RBP15.01□□□□□ -0.01
CSMD1-205ENST00000519623 DIS3LQ8TF46 1054 aaKnown RBP15.01□□□□□ -0.01
CSMD1-205ENST00000519623 RPAP3Q9H6T3 665 aaPredicted RBP15.01□□□□□ -0.01
CSMD1-205ENST00000519623 BTBD7Q9P203 1132 aa15.01□□□□□ -0.01
CSMD1-205ENST00000519623 SWAP70Q9UH65 585 aa15.01□□□□□ -0.01
CSMD1-205ENST00000519623 NR2E3Q9Y5X4 410 aa15.01□□□□□ -0.01
CSMD1-205ENST00000519623 MYH7P12883 1935 aa15□□□□□ -0.01
CSMD1-205ENST00000519623 CYP2D7A0A087X1C5 515 aa15□□□□□ -0.01
CSMD1-205ENST00000519623 SPDYE16A6NNV3 312 aaPredicted RBP15□□□□□ -0.01
CSMD1-205ENST00000519623 USP17L12C9JPN9 530 aa15□□□□□ -0.01
CSMD1-205ENST00000519623 USP17L21D6R901 530 aa15□□□□□ -0.01
CSMD1-205ENST00000519623 PRKAR2AP13861 404 aaKnown RBP15□□□□□ -0.01
CSMD1-205ENST00000519623 RGS2P41220 211 aa15□□□□□ -0.01
CSMD1-205ENST00000519623 CCNA1P78396 465 aa15□□□□□ -0.01
CSMD1-205ENST00000519623 CACNB2Q08289 660 aaPredicted RBP15□□□□□ -0.01
CSMD1-205ENST00000519623 CCL14Q16627 93 aa15□□□□□ -0.01
CSMD1-205ENST00000519623 CHRDL2Q6WN34 429 aa15□□□□□ -0.01
CSMD1-205ENST00000519623 TMEM179Q6ZVK1 233 aa15□□□□□ -0.01
CSMD1-205ENST00000519623 NECAB2Q7Z6G3 386 aa15□□□□□ -0.01
CSMD1-205ENST00000519623 TRMT44Q8IYL2 757 aaKnown RBP15□□□□□ -0.01
CSMD1-205ENST00000519623 ANKLE1Q8NAG6 615 aa15□□□□□ -0.01
CSMD1-205ENST00000519623 PUS7LQ9H0K6 701 aaKnown RBP15□□□□□ -0.01
CSMD1-205ENST00000519623 ECHDC1Q9NTX5 307 aa15□□□□□ -0.01
CSMD1-205ENST00000519623 AKR1B1P15121 316 aa14.99□□□□□ -0.01
CSMD1-205ENST00000519623 CDK8P49336 464 aa14.99□□□□□ -0.01
CSMD1-205ENST00000519623 MAP2K5Q13163 448 aa14.99□□□□□ -0.01
CSMD1-205ENST00000519623 COG2Q14746 738 aa14.99□□□□□ -0.01
CSMD1-205ENST00000519623 PRO3102Q9H379 93 aa14.99□□□□□ -0.01
CSMD1-205ENST00000519623 HOXC10Q9NYD6 342 aa14.99□□□□□ -0.01
CSMD1-205ENST00000519623 RBM27Q9P2N5 1060 aaKnown RBP14.99□□□□□ -0.01
CSMD1-205ENST00000519623 OGDHLQ9ULD0 1010 aa14.99□□□□□ -0.01
CSMD1-205ENST00000519623 RLFQ13129 1914 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms