RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 SENP6Q9GZR1 1112 aaPredicted RBP23.19■■□□□ 1.3
CTNNA1-213ENST00000519113 FPGT-TNNI3KV9GXZ4 949 aa23.19■■□□□ 1.3
CTNNA1-213ENST00000519113 SLC15A5A6NIM6 579 aa23.18■■□□□ 1.3
CTNNA1-213ENST00000519113 MSCO60682 206 aa23.18■■□□□ 1.3
CTNNA1-213ENST00000519113 USP14P54578 494 aa23.18■■□□□ 1.3
CTNNA1-213ENST00000519113 WDR78Q5VTH9 848 aa23.18■■□□□ 1.3
CTNNA1-213ENST00000519113 CERS3Q8IU89 383 aa23.18■■□□□ 1.3
CTNNA1-213ENST00000519113 ZNF512BQ96KM6 892 aaPredicted RBP23.18■■□□□ 1.3
CTNNA1-213ENST00000519113 DBNDD2Q9BQY9 259 aa23.18■■□□□ 1.3
CTNNA1-213ENST00000519113 SIPA1L1O43166 1804 aa23.17■■□□□ 1.3
CTNNA1-213ENST00000519113 POTEB2H3BUK9 544 aa23.17■■□□□ 1.3
CTNNA1-213ENST00000519113 OS9Q13438 667 aaPredicted RBP23.17■■□□□ 1.3
CTNNA1-213ENST00000519113 IVNS1ABPQ9Y6Y0 642 aa23.17■■□□□ 1.3
CTNNA1-213ENST00000519113 CNMDO75829 334 aa23.16■■□□□ 1.3
CTNNA1-213ENST00000519113 TRIM27P14373 513 aa23.16■■□□□ 1.3
CTNNA1-213ENST00000519113 CYP7A1P22680 504 aa23.16■■□□□ 1.3
CTNNA1-213ENST00000519113 PTPREP23469 700 aa23.16■■□□□ 1.3
CTNNA1-213ENST00000519113 ATP2B2Q01814 1243 aa23.16■■□□□ 1.3
CTNNA1-213ENST00000519113 ZYXQ15942 572 aaKnown RBP23.16■■□□□ 1.3
CTNNA1-213ENST00000519113 TATDN1Q6P1N9 297 aa23.16■■□□□ 1.3
CTNNA1-213ENST00000519113 CATSPERGQ6ZRH7 1159 aa23.16■■□□□ 1.3
CTNNA1-213ENST00000519113 LPAR1Q92633 364 aa23.16■■□□□ 1.3
CTNNA1-213ENST00000519113 PRKAG2Q9UGJ0 569 aa23.16■■□□□ 1.3
CTNNA1-213ENST00000519113 DDX20Q9UHI6 824 aaKnown RBP23.16■■□□□ 1.3
CTNNA1-213ENST00000519113 HOXC6P09630 235 aa23.15■■□□□ 1.3
CTNNA1-213ENST00000519113 CNGA1P29973 690 aa23.15■■□□□ 1.3
CTNNA1-213ENST00000519113 ZAP70P43403 619 aa23.15■■□□□ 1.3
CTNNA1-213ENST00000519113 USP5P45974 858 aa23.15■■□□□ 1.3
CTNNA1-213ENST00000519113 DYNLL1P63167 89 aaKnown RBP23.15■■□□□ 1.3
CTNNA1-213ENST00000519113 KIAA1683Q9H0B3 1180 aa23.15■■□□□ 1.3
CTNNA1-213ENST00000519113 PIH1D3Q9NQM4 214 aaKnown RBP23.15■■□□□ 1.3
CTNNA1-213ENST00000519113 FLRT1Q9NZU1 646 aa23.15■■□□□ 1.3
CTNNA1-213ENST00000519113 SERPINB13Q9UIV8 391 aa23.15■■□□□ 1.3
CTNNA1-213ENST00000519113 GTF3C3Q9Y5Q9 886 aa23.15■■□□□ 1.3
CTNNA1-213ENST00000519113 NDUFB9Q9Y6M9 179 aa23.15■■□□□ 1.3
CTNNA1-213ENST00000519113 RAB3GAP1Q15042 981 aa23.14■■□□□ 1.29
CTNNA1-213ENST00000519113 LBX2Q6XYB7 198 aa23.14■■□□□ 1.29
CTNNA1-213ENST00000519113 EHD4Q9H223 541 aa23.14■■□□□ 1.29
CTNNA1-213ENST00000519113 DNM1LO00429 736 aa23.13■■□□□ 1.29
CTNNA1-213ENST00000519113 POLA2Q14181 598 aa23.13■■□□□ 1.29
CTNNA1-213ENST00000519113 GRB14Q14449 540 aa23.13■■□□□ 1.29
CTNNA1-213ENST00000519113 CERKLQ49MI3 558 aaPredicted RBP23.13■■□□□ 1.29
CTNNA1-213ENST00000519113 TTC6Q86TZ1 520 aa23.13■■□□□ 1.29
CTNNA1-213ENST00000519113 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.13■■□□□ 1.29
CTNNA1-213ENST00000519113 FRAT1Q92837 279 aaPredicted RBP23.13■■□□□ 1.29
CTNNA1-213ENST00000519113 CABP5Q9NP86 173 aa23.13■■□□□ 1.29
CTNNA1-213ENST00000519113 MAST2Q6P0Q8 1798 aa23.13■■□□□ 1.29
CTNNA1-213ENST00000519113 VCAM1P19320 739 aa23.12■■□□□ 1.29
CTNNA1-213ENST00000519113 ATN1P54259 1190 aaPredicted RBP23.12■■□□□ 1.29
CTNNA1-213ENST00000519113 ABCB5Q2M3G0 1257 aa23.12■■□□□ 1.29
CTNNA1-213ENST00000519113 GUCD1Q96NT3 240 aa23.12■■□□□ 1.29
CTNNA1-213ENST00000519113 COL25A1Q9BXS0 654 aaPredicted RBP23.12■■□□□ 1.29
CTNNA1-213ENST00000519113 SURF6O75683 361 aaKnown RBP23.11■■□□□ 1.29
CTNNA1-213ENST00000519113 IDH1O75874 414 aaKnown RBP23.11■■□□□ 1.29
CTNNA1-213ENST00000519113 MIGA1Q8NAN2 632 aa23.11■■□□□ 1.29
CTNNA1-213ENST00000519113 SSH3Q8TE77 659 aa23.11■■□□□ 1.29
CTNNA1-213ENST00000519113 CLUAP1Q96AJ1 413 aa23.11■■□□□ 1.29
CTNNA1-213ENST00000519113 BTBD7Q9P203 1132 aa23.11■■□□□ 1.29
CTNNA1-213ENST00000519113 CYP2C19P33261 490 aa23.1■■□□□ 1.29
CTNNA1-213ENST00000519113 RTP1P59025 263 aa23.1■■□□□ 1.29
CTNNA1-213ENST00000519113 ZNF697Q5TEC3 545 aa23.1■■□□□ 1.29
CTNNA1-213ENST00000519113 TMED8Q6PL24 325 aaPredicted RBP23.1■■□□□ 1.29
CTNNA1-213ENST00000519113 ARRDC4Q8NCT1 418 aa23.1■■□□□ 1.29
CTNNA1-213ENST00000519113 NPLOC4Q8TAT6 608 aa23.1■■□□□ 1.29
CTNNA1-213ENST00000519113 ACER1Q8TDN7 264 aa23.1■■□□□ 1.29
CTNNA1-213ENST00000519113 SPDYE16A6NNV3 312 aaPredicted RBP23.09■■□□□ 1.29
CTNNA1-213ENST00000519113 ATP8B2P98198 1209 aa23.09■■□□□ 1.29
CTNNA1-213ENST00000519113 DPP9Q86TI2 863 aa23.09■■□□□ 1.29
CTNNA1-213ENST00000519113 MAGEB6Q8N7X4 407 aa23.09■■□□□ 1.29
CTNNA1-213ENST00000519113 FAM161BQ96MY7 647 aa23.09■■□□□ 1.29
CTNNA1-213ENST00000519113 RPAP3Q9H6T3 665 aaPredicted RBP23.09■■□□□ 1.29
CTNNA1-213ENST00000519113 DBNLQ9UJU6 430 aaKnown RBP23.09■■□□□ 1.29
CTNNA1-213ENST00000519113 TNNQ9UQP3 1299 aa23.09■■□□□ 1.29
CTNNA1-213ENST00000519113 FOCADQ5VW36 1801 aa23.08■■□□□ 1.29
CTNNA1-213ENST00000519113 STRNO43815 780 aa23.08■■□□□ 1.29
CTNNA1-213ENST00000519113 HOXC10Q9NYD6 342 aa23.08■■□□□ 1.29
CTNNA1-213ENST00000519113 BCAR3O75815 825 aa23.07■■□□□ 1.28
CTNNA1-213ENST00000519113 CYBAP13498 195 aa23.07■■□□□ 1.28
CTNNA1-213ENST00000519113 MAP3K12Q12852 859 aa23.07■■□□□ 1.28
CTNNA1-213ENST00000519113 OLFML2BQ68BL8 750 aa23.07■■□□□ 1.28
CTNNA1-213ENST00000519113 TRPV1Q8NER1 839 aa23.07■■□□□ 1.28
CTNNA1-213ENST00000519113 ATP11BQ9Y2G3 1177 aa23.07■■□□□ 1.28
CTNNA1-213ENST00000519113 CDK5RAP2Q96SN8 1893 aa23.07■■□□□ 1.28
CTNNA1-213ENST00000519113 KBTBD13C9JR72 458 aa23.06■■□□□ 1.28
CTNNA1-213ENST00000519113 IGHA2P01877 340 aa23.06■■□□□ 1.28
CTNNA1-213ENST00000519113 COG2Q14746 738 aa23.06■■□□□ 1.28
CTNNA1-213ENST00000519113 GJC2Q5T442 439 aaPredicted RBP23.06■■□□□ 1.28
CTNNA1-213ENST00000519113 TMEM57Q8N5G2 664 aa23.06■■□□□ 1.28
CTNNA1-213ENST00000519113 CCDC8Q9H0W5 538 aaPredicted RBP23.06■■□□□ 1.28
CTNNA1-213ENST00000519113 NOP58Q9Y2X3 529 aaKnown RBP23.06■■□□□ 1.28
CTNNA1-213ENST00000519113 ADORA2AP29274 412 aa23.05■■□□□ 1.28
CTNNA1-213ENST00000519113 SHMT1P34896 483 aa23.05■■□□□ 1.28
CTNNA1-213ENST00000519113 SLC39A5Q6ZMH5 540 aa23.05■■□□□ 1.28
CTNNA1-213ENST00000519113 SLC5A4Q9NY91 659 aa23.05■■□□□ 1.28
CTNNA1-213ENST00000519113 TLR7Q9NYK1 1049 aaKnown RBP23.05■■□□□ 1.28
CTNNA1-213ENST00000519113 EYSQ5T1H1 3165 aa23.05■■□□□ 1.28
CTNNA1-213ENST00000519113 VCANP13611 3396 aa23.04■■□□□ 1.28
CTNNA1-213ENST00000519113 POLR3DP05423 398 aaPredicted RBP23.04■■□□□ 1.28
CTNNA1-213ENST00000519113 PLCD1P51178 756 aa23.04■■□□□ 1.28
CTNNA1-213ENST00000519113 SHCBP1Q8NEM2 672 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms