RNA–Protein interactions for RNA: ENST00000519072.5

VDAC3-204, Transcript of voltage dependent anion channel 3, humanhuman

TSL 1 (best)

Gene VDAC3, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-204ENST00000519072 GPR142Q7Z601 462 aa16.66■□□□□ 0.26
VDAC3-204ENST00000519072 PLEKHH3Q7Z736 793 aa16.66■□□□□ 0.26
VDAC3-204ENST00000519072 CCAR1Q8IX12 1150 aaKnown RBP16.66■□□□□ 0.26
VDAC3-204ENST00000519072 MAGEB6Q8N7X4 407 aa16.66■□□□□ 0.26
VDAC3-204ENST00000519072 MIGA1Q8NAN2 632 aa16.66■□□□□ 0.26
VDAC3-204ENST00000519072 NAV1Q8NEY1 1877 aa16.66■□□□□ 0.26
VDAC3-204ENST00000519072 PAGR1Q9BTK6 254 aa16.66■□□□□ 0.26
VDAC3-204ENST00000519072 SERPINB13Q9UIV8 391 aa16.66■□□□□ 0.26
VDAC3-204ENST00000519072 DNAH12Q6ZR08 3092 aa16.65■□□□□ 0.26
VDAC3-204ENST00000519072 SOX1O00570 391 aaPredicted RBP16.65■□□□□ 0.26
VDAC3-204ENST00000519072 RGS2P41220 211 aa16.65■□□□□ 0.26
VDAC3-204ENST00000519072 CACNB2Q08289 660 aaPredicted RBP16.65■□□□□ 0.26
VDAC3-204ENST00000519072 MAP3K12Q12852 859 aa16.65■□□□□ 0.26
VDAC3-204ENST00000519072 TTC6Q86TZ1 520 aa16.65■□□□□ 0.26
VDAC3-204ENST00000519072 RABGAP1Q9Y3P9 1069 aa16.65■□□□□ 0.26
VDAC3-204ENST00000519072 USP17L15C9J2P7 530 aa16.64■□□□□ 0.25
VDAC3-204ENST00000519072 USP17L13C9JLJ4 530 aa16.64■□□□□ 0.25
VDAC3-204ENST00000519072 USP17L11C9JVI0 530 aa16.64■□□□□ 0.25
VDAC3-204ENST00000519072 USP17L18D6R9N7 530 aa16.64■□□□□ 0.25
VDAC3-204ENST00000519072 USP17L22D6RA61 530 aa16.64■□□□□ 0.25
VDAC3-204ENST00000519072 USP17L17D6RBQ6 530 aa16.64■□□□□ 0.25
VDAC3-204ENST00000519072 USP17L19D6RCP7 530 aa16.64■□□□□ 0.25
VDAC3-204ENST00000519072 USP17L20D6RJB6 530 aa16.64■□□□□ 0.25
VDAC3-204ENST00000519072 USP14P54578 494 aa16.64■□□□□ 0.25
VDAC3-204ENST00000519072 USP17L24Q0WX57 530 aa16.64■□□□□ 0.25
VDAC3-204ENST00000519072 CEP85Q6P2H3 762 aa16.64■□□□□ 0.25
VDAC3-204ENST00000519072 ERC1Q8IUD2 1116 aa16.64■□□□□ 0.25
VDAC3-204ENST00000519072 FEZ1Q99689 392 aa16.64■□□□□ 0.25
VDAC3-204ENST00000519072 APBA2Q99767 749 aa16.64■□□□□ 0.25
VDAC3-204ENST00000519072 ANTXR1Q9H6X2 564 aa16.64■□□□□ 0.25
VDAC3-204ENST00000519072 ZMYND8Q9ULU4 1186 aaPredicted RBP16.64■□□□□ 0.25
VDAC3-204ENST00000519072 NDUFB9Q9Y6M9 179 aa16.64■□□□□ 0.25
VDAC3-204ENST00000519072 PFASO15067 1338 aa16.64■□□□□ 0.25
VDAC3-204ENST00000519072 CNMDO75829 334 aa16.63■□□□□ 0.25
VDAC3-204ENST00000519072 CCNA1P78396 465 aa16.63■□□□□ 0.25
VDAC3-204ENST00000519072 ZYXQ15942 572 aaKnown RBP16.63■□□□□ 0.25
VDAC3-204ENST00000519072 CCL14Q16627 93 aa16.63■□□□□ 0.25
VDAC3-204ENST00000519072 ABCB5Q2M3G0 1257 aa16.63■□□□□ 0.25
VDAC3-204ENST00000519072 CERKLQ49MI3 558 aaPredicted RBP16.63■□□□□ 0.25
VDAC3-204ENST00000519072 CATSPERGQ6ZRH7 1159 aa16.63■□□□□ 0.25
VDAC3-204ENST00000519072 LRCH3Q96II8 777 aa16.63■□□□□ 0.25
VDAC3-204ENST00000519072 RIOK1Q9BRS2 568 aaKnown RBP16.63■□□□□ 0.25
VDAC3-204ENST00000519072 KIAA1683Q9H0B3 1180 aa16.63■□□□□ 0.25
VDAC3-204ENST00000519072 GLRX3O76003 335 aaKnown RBP16.62■□□□□ 0.25
VDAC3-204ENST00000519072 COL6A1P12109 1028 aa16.62■□□□□ 0.25
VDAC3-204ENST00000519072 MAP2K5Q13163 448 aa16.62■□□□□ 0.25
VDAC3-204ENST00000519072 RAB3GAP1Q15042 981 aa16.62■□□□□ 0.25
VDAC3-204ENST00000519072 LHX8Q68G74 356 aa16.62■□□□□ 0.25
VDAC3-204ENST00000519072 LBX2Q6XYB7 198 aa16.62■□□□□ 0.25
VDAC3-204ENST00000519072 AACSQ86V21 672 aa16.62■□□□□ 0.25
VDAC3-204ENST00000519072 CWC22Q9HCG8 908 aaKnown RBP16.62■□□□□ 0.25
VDAC3-204ENST00000519072 CABP5Q9NP86 173 aa16.62■□□□□ 0.25
VDAC3-204ENST00000519072 EXOC6BQ9Y2D4 811 aa16.62■□□□□ 0.25
VDAC3-204ENST00000519072 MYH8P13535 1937 aa16.62■□□□□ 0.25
VDAC3-204ENST00000519072 A0A0C4DFX4 3053 aa16.61■□□□□ 0.25
VDAC3-204ENST00000519072 SYN1P17600 705 aa16.61■□□□□ 0.25
VDAC3-204ENST00000519072 VCAM1P19320 739 aa16.61■□□□□ 0.25
VDAC3-204ENST00000519072 CCND3P30281 292 aaPredicted RBP16.61■□□□□ 0.25
VDAC3-204ENST00000519072 SHMT1P34896 483 aa16.61■□□□□ 0.25
VDAC3-204ENST00000519072 HNRNPUQ00839 825 aaKnown RBP eCLIP16.61■□□□□ 0.25
VDAC3-204ENST00000519072 ACER1Q8TDN7 264 aa16.61■□□□□ 0.25
VDAC3-204ENST00000519072 EDC3Q96F86 508 aaKnown RBP16.61■□□□□ 0.25
VDAC3-204ENST00000519072 SLC15A5A6NIM6 579 aa16.6■□□□□ 0.25
VDAC3-204ENST00000519072 PTPREP23469 700 aa16.6■□□□□ 0.25
VDAC3-204ENST00000519072 MAGEA10P43363 369 aaPredicted RBP16.6■□□□□ 0.25
VDAC3-204ENST00000519072 PLCD1P51178 756 aa16.6■□□□□ 0.25
VDAC3-204ENST00000519072 TTF1Q15361 905 aaPredicted RBP16.6■□□□□ 0.25
VDAC3-204ENST00000519072 HSP90AB4PQ58FF6 505 aa16.6■□□□□ 0.25
VDAC3-204ENST00000519072 GPR153Q6NV75 609 aa16.6■□□□□ 0.25
VDAC3-204ENST00000519072 RLFQ13129 1914 aa16.6■□□□□ 0.25
VDAC3-204ENST00000519072 CUL9Q8IWT3 2517 aa16.59■□□□□ 0.25
VDAC3-204ENST00000519072 ZNF236Q9UL36 1845 aa16.59■□□□□ 0.25
VDAC3-204ENST00000519072 MAGEB6P1A0A0J9YX57 407 aa16.59■□□□□ 0.25
VDAC3-204ENST00000519072 POLR3DP05423 398 aaPredicted RBP16.59■□□□□ 0.25
VDAC3-204ENST00000519072 HOXC6P09630 235 aa16.59■□□□□ 0.25
VDAC3-204ENST00000519072 GUCY1A2P33402 732 aa16.59■□□□□ 0.25
VDAC3-204ENST00000519072 GABPAQ06546 454 aa16.59■□□□□ 0.25
VDAC3-204ENST00000519072 BTBD7Q9P203 1132 aa16.59■□□□□ 0.25
VDAC3-204ENST00000519072 A0A0G2JMZ2 1700 aa16.59■□□□□ 0.25
VDAC3-204ENST00000519072 SPDYE16A6NNV3 312 aaPredicted RBP16.58■□□□□ 0.24
VDAC3-204ENST00000519072 PDE6AP16499 860 aa16.58■□□□□ 0.24
VDAC3-204ENST00000519072 MKRN4PQ13434 485 aaPredicted RBP16.58■□□□□ 0.24
VDAC3-204ENST00000519072 GRB14Q14449 540 aa16.58■□□□□ 0.24
VDAC3-204ENST00000519072 LRIT3Q3SXY7 679 aa16.58■□□□□ 0.24
VDAC3-204ENST00000519072 WDR78Q5VTH9 848 aa16.58■□□□□ 0.24
VDAC3-204ENST00000519072 MFSD14CQ5VZR4 134 aa16.58■□□□□ 0.24
VDAC3-204ENST00000519072 TDHQ8IZJ6 230 aa16.58■□□□□ 0.24
VDAC3-204ENST00000519072 RHPN1Q8TCX5 695 aa16.58■□□□□ 0.24
VDAC3-204ENST00000519072 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.58■□□□□ 0.24
VDAC3-204ENST00000519072 CRNKL1Q9BZJ0 848 aaKnown RBP16.58■□□□□ 0.24
VDAC3-204ENST00000519072 RPAP3Q9H6T3 665 aaPredicted RBP16.58■□□□□ 0.24
VDAC3-204ENST00000519072 IL1RAPL2Q9NP60 686 aa16.58■□□□□ 0.24
VDAC3-204ENST00000519072 FLRT1Q9NZU1 646 aa16.58■□□□□ 0.24
VDAC3-204ENST00000519072 IVNS1ABPQ9Y6Y0 642 aa16.58■□□□□ 0.24
VDAC3-204ENST00000519072 SEPT2Q15019 361 aa16.57■□□□□ 0.24
VDAC3-204ENST00000519072 LRRC26Q2I0M4 334 aa16.57■□□□□ 0.24
VDAC3-204ENST00000519072 SLC9C2Q5TAH2 1124 aa16.57■□□□□ 0.24
VDAC3-204ENST00000519072 PANK1Q8TE04 598 aa16.57■□□□□ 0.24
VDAC3-204ENST00000519072 MCM9Q9NXL9 1143 aa16.57■□□□□ 0.24
VDAC3-204ENST00000519072 LAMA2P24043 3122 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms