RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 RAG1P15918 1043 aa8.52□□□□□ -1.05
SQLE-203ENST00000518931 SOX9P48436 509 aa8.52□□□□□ -1.05
SQLE-203ENST00000518931 NASPP49321 788 aaPredicted RBP8.52□□□□□ -1.05
SQLE-203ENST00000518931 CCDC81Q6ZN84 652 aa8.52□□□□□ -1.05
SQLE-203ENST00000518931 PPP1R13LQ8WUF5 828 aa8.52□□□□□ -1.05
SQLE-203ENST00000518931 ZNRF3Q9ULT6 936 aa8.52□□□□□ -1.05
SQLE-203ENST00000518931 U3KQE9 123 aa8.52□□□□□ -1.05
SQLE-203ENST00000518931 IGF2BP3O00425 579 aaKnown RBP eCLIP8.51□□□□□ -1.05
SQLE-203ENST00000518931 IMPDH2P12268 514 aa8.51□□□□□ -1.05
SQLE-203ENST00000518931 GBP1P32455 592 aa8.51□□□□□ -1.05
SQLE-203ENST00000518931 ETV3P41162 512 aa8.51□□□□□ -1.05
SQLE-203ENST00000518931 CD97P48960 835 aa8.51□□□□□ -1.05
SQLE-203ENST00000518931 OXCT1P55809 520 aa8.51□□□□□ -1.05
SQLE-203ENST00000518931 GNL2Q13823 731 aaKnown RBP8.51□□□□□ -1.05
SQLE-203ENST00000518931 SFRP5Q5T4F7 317 aa8.51□□□□□ -1.05
SQLE-203ENST00000518931 CDCP2Q5VXM1 449 aa8.51□□□□□ -1.05
SQLE-203ENST00000518931 NLRC3Q7RTR2 1065 aa8.51□□□□□ -1.05
SQLE-203ENST00000518931 VPS37DQ86XT2 251 aa8.51□□□□□ -1.05
SQLE-203ENST00000518931 DHX37Q8IY37 1157 aaKnown RBP8.51□□□□□ -1.05
SQLE-203ENST00000518931 DNAJB8Q8NHS0 232 aa8.51□□□□□ -1.05
SQLE-203ENST00000518931 TMEM40Q8WWA1 233 aa8.51□□□□□ -1.05
SQLE-203ENST00000518931 SEC16BQ96JE7 1060 aa8.51□□□□□ -1.05
SQLE-203ENST00000518931 CNNM2Q9H8M5 875 aa8.51□□□□□ -1.05
SQLE-203ENST00000518931 SCO2A0A1W2PP80 73 aa8.5□□□□□ -1.05
SQLE-203ENST00000518931 RGS13O14921 159 aa8.5□□□□□ -1.05
SQLE-203ENST00000518931 CBX7O95931 251 aa8.5□□□□□ -1.05
SQLE-203ENST00000518931 ITIH2P19823 946 aa8.5□□□□□ -1.05
SQLE-203ENST00000518931 CYP7A1P22680 504 aa8.5□□□□□ -1.05
SQLE-203ENST00000518931 ZNF746Q6NUN9 644 aaPredicted RBP8.5□□□□□ -1.05
SQLE-203ENST00000518931 FAM177A1Q8N128 213 aaPredicted RBP8.5□□□□□ -1.05
SQLE-203ENST00000518931 PLD6Q8N2A8 252 aaKnown RBP8.5□□□□□ -1.05
SQLE-203ENST00000518931 CRBNQ96SW2 442 aa8.5□□□□□ -1.05
SQLE-203ENST00000518931 MAPK8IP1Q9UQF2 711 aa8.5□□□□□ -1.05
SQLE-203ENST00000518931 GNAT3A8MTJ3 354 aa8.49□□□□□ -1.05
SQLE-203ENST00000518931 HYAL3O43820 417 aaPredicted RBP8.49□□□□□ -1.05
SQLE-203ENST00000518931 NME1P15531 152 aaKnown RBP8.49□□□□□ -1.05
SQLE-203ENST00000518931 ATF4P18848 351 aaPredicted RBP8.49□□□□□ -1.05
SQLE-203ENST00000518931 MSMPQ1L6U9 139 aa8.49□□□□□ -1.05
SQLE-203ENST00000518931 NETO1Q8TDF5 533 aa8.49□□□□□ -1.05
SQLE-203ENST00000518931 CPLX3Q8WVH0 158 aa8.49□□□□□ -1.05
SQLE-203ENST00000518931 MKNK2Q9HBH9 465 aa8.49□□□□□ -1.05
SQLE-203ENST00000518931 PCMTD2Q9NV79 361 aa8.49□□□□□ -1.05
SQLE-203ENST00000518931 MEIS3P2A8K0S8 358 aa8.48□□□□□ -1.05
SQLE-203ENST00000518931 PRR33A8MZF0 331 aa8.48□□□□□ -1.05
SQLE-203ENST00000518931 POLR2BP30876 1174 aaKnown RBP8.48□□□□□ -1.05
SQLE-203ENST00000518931 EIF6P56537 245 aaKnown RBP8.48□□□□□ -1.05
SQLE-203ENST00000518931 LRP8Q14114 963 aa8.48□□□□□ -1.05
SQLE-203ENST00000518931 TINF2Q9BSI4 451 aa8.48□□□□□ -1.05
SQLE-203ENST00000518931 SRRTQ9BXP5 876 aaKnown RBP8.48□□□□□ -1.05
SQLE-203ENST00000518931 PLAGL2Q9UPG8 496 aa8.48□□□□□ -1.05
SQLE-203ENST00000518931 UBOX5O94941 541 aa8.47□□□□□ -1.05
SQLE-203ENST00000518931 CEACAM5P06731 702 aa8.47□□□□□ -1.05
SQLE-203ENST00000518931 CHMP4BP1P59074 171 aa8.47□□□□□ -1.05
SQLE-203ENST00000518931 RUFY4Q6ZNE9 571 aa8.47□□□□□ -1.05
SQLE-203ENST00000518931 DTX1Q86Y01 620 aa8.47□□□□□ -1.05
SQLE-203ENST00000518931 RBBP8NLQ8NC74 664 aaPredicted RBP8.47□□□□□ -1.05
SQLE-203ENST00000518931 BSDC1Q9NW68 430 aaPredicted RBP8.47□□□□□ -1.05
SQLE-203ENST00000518931 FAM155AB1AL88 458 aaPredicted RBP8.46□□□□□ -1.06
SQLE-203ENST00000518931 NKPD1Q17RQ9 610 aa8.46□□□□□ -1.06
SQLE-203ENST00000518931 TAF7LQ5H9L4 462 aa8.46□□□□□ -1.06
SQLE-203ENST00000518931 ARTNQ5T4W7 220 aa8.46□□□□□ -1.06
SQLE-203ENST00000518931 INTS3Q68E01 1043 aaKnown RBP8.46□□□□□ -1.06
SQLE-203ENST00000518931 FAM9AQ8IZU1 332 aaPredicted RBP8.46□□□□□ -1.06
SQLE-203ENST00000518931 COX4I2Q96KJ9 171 aa8.46□□□□□ -1.06
SQLE-203ENST00000518931 KREMEN1Q96MU8 473 aa8.46□□□□□ -1.06
SQLE-203ENST00000518931 SLC9A7Q96T83 725 aa8.46□□□□□ -1.06
SQLE-203ENST00000518931 FAM86C2PA6NEL3 165 aa8.45□□□□□ -1.06
SQLE-203ENST00000518931 KIAA1324LA8MWY0 1029 aaPredicted RBP8.45□□□□□ -1.06
SQLE-203ENST00000518931 TNFRSF10CO14798 259 aa8.45□□□□□ -1.06
SQLE-203ENST00000518931 ACRP10323 421 aa8.45□□□□□ -1.06
SQLE-203ENST00000518931 SPINK2P20155 84 aa8.45□□□□□ -1.06
SQLE-203ENST00000518931 CANXP27824 592 aaKnown RBP8.45□□□□□ -1.06
SQLE-203ENST00000518931 GIPRP48546 466 aa8.45□□□□□ -1.06
SQLE-203ENST00000518931 ZC3H6P61129 1189 aaKnown RBP8.45□□□□□ -1.06
SQLE-203ENST00000518931 IFI16Q16666 785 aaKnown RBP8.45□□□□□ -1.06
SQLE-203ENST00000518931 CDKAL1Q5VV42 579 aa8.45□□□□□ -1.06
SQLE-203ENST00000518931 LSRQ86X29 649 aaPredicted RBP8.45□□□□□ -1.06
SQLE-203ENST00000518931 MFSD4AQ8N468 514 aa8.45□□□□□ -1.06
SQLE-203ENST00000518931 TM9SF2Q99805 663 aa8.45□□□□□ -1.06
SQLE-203ENST00000518931 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.45□□□□□ -1.06
SQLE-203ENST00000518931 CAPN6Q9Y6Q1 641 aa8.45□□□□□ -1.06
SQLE-203ENST00000518931 TMEM265A0A087WTH1 108 aa8.44□□□□□ -1.06
SQLE-203ENST00000518931 LRRN2O75325 713 aa8.44□□□□□ -1.06
SQLE-203ENST00000518931 ZNF865P0CJ78 1059 aaPredicted RBP8.44□□□□□ -1.06
SQLE-203ENST00000518931 DNAJA1P31689 397 aaKnown RBP8.44□□□□□ -1.06
SQLE-203ENST00000518931 KIR3DL1P43629 444 aa8.44□□□□□ -1.06
SQLE-203ENST00000518931 ARID5AQ03989 594 aa8.44□□□□□ -1.06
SQLE-203ENST00000518931 NAALADL2Q58DX5 795 aa8.44□□□□□ -1.06
SQLE-203ENST00000518931 C22orf34Q6ZV56 151 aa8.44□□□□□ -1.06
SQLE-203ENST00000518931 SPACA3Q8IXA5 215 aa8.44□□□□□ -1.06
SQLE-203ENST00000518931 SLC43A3Q8NBI5 491 aa8.44□□□□□ -1.06
SQLE-203ENST00000518931 RNF141Q8WVD5 230 aa8.44□□□□□ -1.06
SQLE-203ENST00000518931 SHDQ96IW2 340 aa8.44□□□□□ -1.06
SQLE-203ENST00000518931 TNKS2Q9H2K2 1166 aa8.44□□□□□ -1.06
SQLE-203ENST00000518931 ZFP64Q9NPA5 681 aa8.44□□□□□ -1.06
SQLE-203ENST00000518931 COL17A1Q9UMD9 1497 aaPredicted RBP8.44□□□□□ -1.06
SQLE-203ENST00000518931 CCNFP41002 786 aa8.43□□□□□ -1.06
SQLE-203ENST00000518931 TNK2Q07912 1038 aa8.43□□□□□ -1.06
SQLE-203ENST00000518931 BNIP3Q12983 259 aa8.43□□□□□ -1.06
SQLE-203ENST00000518931 TMEM192Q8IY95 271 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms