RNA–Protein interactions for RNA: ENST00000518930.1

PCM1-209, Transcript of pericentriolar material 1, human

TSL 3

Gene PCM1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-209	ENST00000518930	PPP4R3B	Q5MIZ7	849 aa		28.63	■■■□□ 2.17
PCM1-209	ENST00000518930	NCOA7	Q8NI08	942 aa		28.63	■■■□□ 2.17
PCM1-209	ENST00000518930	FEZ1	Q99689	392 aa		28.63	■■■□□ 2.17
PCM1-209	ENST00000518930	WDR18	Q9BV38	432 aa		28.63	■■■□□ 2.17
PCM1-209	ENST00000518930	ARHGEF10L	Q9HCE6	1279 aa		28.63	■■■□□ 2.17
PCM1-209	ENST00000518930	TAF6L	Q9Y6J9	622 aa		28.63	■■■□□ 2.17
PCM1-209	ENST00000518930	PTPRF	P10586	1907 aa		28.63	■■■□□ 2.17
PCM1-209	ENST00000518930	KDM4A	O75164	1064 aa		28.62	■■■□□ 2.17
PCM1-209	ENST00000518930	GTF2A2	P52657	109 aa		28.62	■■■□□ 2.17
PCM1-209	ENST00000518930	SPP2	Q13103	211 aa		28.62	■■■□□ 2.17
PCM1-209	ENST00000518930	KCNH4	Q9UQ05	1017 aa		28.62	■■■□□ 2.17
PCM1-209	ENST00000518930	MANSC4	A6NHS7	340 aa	Predicted RBP	28.61	■■■□□ 2.17
PCM1-209	ENST00000518930	CXCL11	O14625	94 aa		28.61	■■■□□ 2.17
PCM1-209	ENST00000518930	ATP2B2	Q01814	1243 aa		28.61	■■■□□ 2.17
PCM1-209	ENST00000518930	KRT32	Q14532	448 aa		28.61	■■■□□ 2.17
PCM1-209	ENST00000518930	STOX1	Q6ZVD7	989 aa		28.61	■■■□□ 2.17
PCM1-209	ENST00000518930	CLEC10A	Q8IUN9	316 aa		28.61	■■■□□ 2.17
PCM1-209	ENST00000518930	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	28.61	■■■□□ 2.17
PCM1-209	ENST00000518930	SH2D4A	Q9H788	454 aa		28.61	■■■□□ 2.17
PCM1-209	ENST00000518930	MYH4	Q9Y623	1939 aa		28.61	■■■□□ 2.17
PCM1-209	ENST00000518930	IGKV6D-41	A0A0C4DH26	115 aa		28.6	■■■□□ 2.17
PCM1-209	ENST00000518930	AOC2	O75106	756 aa		28.6	■■■□□ 2.17
PCM1-209	ENST00000518930	IQCA1	Q86XH1	822 aa		28.6	■■■□□ 2.17
PCM1-209	ENST00000518930	CEP95	Q96GE4	821 aa		28.6	■■■□□ 2.17
PCM1-209	ENST00000518930	USP17L10	C9JJH3	530 aa		28.59	■■■□□ 2.17
PCM1-209	ENST00000518930	SEC24B	O95487	1268 aa		28.59	■■■□□ 2.17
PCM1-209	ENST00000518930	CETP	P11597	493 aa		28.59	■■■□□ 2.17
PCM1-209	ENST00000518930	SREBF2	Q12772	1141 aa		28.59	■■■□□ 2.17
PCM1-209	ENST00000518930	MTMR2	Q13614	643 aa		28.59	■■■□□ 2.17
PCM1-209	ENST00000518930	LOC285556	D6RIA3	1793 aa		28.58	■■■□□ 2.17
PCM1-209	ENST00000518930	TTLL1	O95922	423 aa		28.58	■■■□□ 2.17
PCM1-209	ENST00000518930	EEF2	P13639	858 aa	Known RBP	28.58	■■■□□ 2.17
PCM1-209	ENST00000518930	MAP2K2	P36507	400 aa		28.58	■■■□□ 2.17
PCM1-209	ENST00000518930	KIF23	Q02241	960 aa	Predicted RBP	28.58	■■■□□ 2.17
PCM1-209	ENST00000518930	TSGA10IP	Q3SY00	556 aa		28.58	■■■□□ 2.17
PCM1-209	ENST00000518930	KCNB2	Q92953	911 aa		28.58	■■■□□ 2.17
PCM1-209	ENST00000518930	UBAC1	Q9BSL1	405 aa		28.58	■■■□□ 2.17
PCM1-209	ENST00000518930	MTMR4	Q9NYA4	1195 aa		28.58	■■■□□ 2.17
PCM1-209	ENST00000518930	C19orf81	C9J6K1	198 aa		28.57	■■■□□ 2.16
PCM1-209	ENST00000518930	USP14	P54578	494 aa		28.57	■■■□□ 2.16
PCM1-209	ENST00000518930	BACE1	P56817	501 aa		28.57	■■■□□ 2.16
PCM1-209	ENST00000518930	CCDC178	Q5BJE1	867 aa		28.57	■■■□□ 2.16
PCM1-209	ENST00000518930	REM2	Q8IYK8	340 aa	Predicted RBP	28.57	■■■□□ 2.16
PCM1-209	ENST00000518930	RASEF	Q8IZ41	740 aa		28.57	■■■□□ 2.16
PCM1-209	ENST00000518930	ACER1	Q8TDN7	264 aa		28.57	■■■□□ 2.16
PCM1-209	ENST00000518930	TCP11L1	Q9NUJ3	509 aa		28.57	■■■□□ 2.16
PCM1-209	ENST00000518930	TMOD4	Q9NZQ9	345 aa		28.57	■■■□□ 2.16
PCM1-209	ENST00000518930	ZSWIM5	Q9P217	1185 aa		28.57	■■■□□ 2.16
PCM1-209	ENST00000518930	NYAP2	Q9P242	653 aa		28.57	■■■□□ 2.16
PCM1-209	ENST00000518930	STX8	Q9UNK0	236 aa		28.57	■■■□□ 2.16
PCM1-209	ENST00000518930	SNX14	Q9Y5W7	946 aa		28.57	■■■□□ 2.16
PCM1-209	ENST00000518930	CCL15-CCL14	A0A0B4J2E2	113 aa		28.56	■■■□□ 2.16
PCM1-209	ENST00000518930		A0A0G2JLL6	359 aa	Predicted RBP	28.56	■■■□□ 2.16
PCM1-209	ENST00000518930	NMT2	O60551	498 aa		28.56	■■■□□ 2.16
PCM1-209	ENST00000518930	ZYX	Q15942	572 aa	Known RBP	28.56	■■■□□ 2.16
PCM1-209	ENST00000518930	CCL15	Q16663	113 aa		28.56	■■■□□ 2.16
PCM1-209	ENST00000518930	PRRT2	Q7Z6L0	340 aa	Predicted RBP	28.56	■■■□□ 2.16
PCM1-209	ENST00000518930	KIAA1683	Q9H0B3	1180 aa		28.56	■■■□□ 2.16
PCM1-209	ENST00000518930	UPF2	Q9HAU5	1272 aa	Known RBP	28.56	■■■□□ 2.16
PCM1-209	ENST00000518930	CLIP2	Q9UDT6	1046 aa		28.56	■■■□□ 2.16
PCM1-209	ENST00000518930	HMGCS2	P54868	508 aa		28.55	■■■□□ 2.16
PCM1-209	ENST00000518930	INHBE	P58166	350 aa		28.55	■■■□□ 2.16
PCM1-209	ENST00000518930	SART3	Q15020	963 aa	Known RBP	28.55	■■■□□ 2.16
PCM1-209	ENST00000518930	GADL1	Q6ZQY3	521 aa		28.55	■■■□□ 2.16
PCM1-209	ENST00000518930	FASTKD5	Q7L8L6	764 aa	Known RBP	28.55	■■■□□ 2.16
PCM1-209	ENST00000518930	MB21D2	Q8IYB1	491 aa	Predicted RBP	28.55	■■■□□ 2.16
PCM1-209	ENST00000518930	MS4A4A	Q96JQ5	239 aa		28.55	■■■□□ 2.16
PCM1-209	ENST00000518930	ZKSCAN3	Q9BRR0	538 aa		28.55	■■■□□ 2.16
PCM1-209	ENST00000518930	IL17RB	Q9NRM6	502 aa		28.55	■■■□□ 2.16
PCM1-209	ENST00000518930	TMX2	Q9Y320	296 aa		28.55	■■■□□ 2.16
PCM1-209	ENST00000518930	USP17L2	Q6R6M4	530 aa		28.54	■■■□□ 2.16
PCM1-209	ENST00000518930	CYB5R4	Q7L1T6	521 aa		28.54	■■■□□ 2.16
PCM1-209	ENST00000518930	NKX2-3	Q8TAU0	364 aa		28.54	■■■□□ 2.16
PCM1-209	ENST00000518930	NEK1	Q96PY6	1258 aa		28.54	■■■□□ 2.16
PCM1-209	ENST00000518930	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	28.54	■■■□□ 2.16
PCM1-209	ENST00000518930	ZIC5	Q96T25	663 aa		28.54	■■■□□ 2.16
PCM1-209	ENST00000518930	TNKS	O95271	1327 aa		28.53	■■■□□ 2.16
PCM1-209	ENST00000518930		A0A1W2PRG0	241 aa		28.53	■■■□□ 2.16
PCM1-209	ENST00000518930	ERICH2	A1L162	156 aa		28.53	■■■□□ 2.16
PCM1-209	ENST00000518930	MCM5	P33992	734 aa		28.53	■■■□□ 2.16
PCM1-209	ENST00000518930	SH3D19	Q5HYK7	790 aa		28.53	■■■□□ 2.16
PCM1-209	ENST00000518930	SIAH1	Q8IUQ4	282 aa		28.53	■■■□□ 2.16
PCM1-209	ENST00000518930	DNAJC5G	Q8N7S2	189 aa		28.53	■■■□□ 2.16
PCM1-209	ENST00000518930	PROCA1	Q8NCQ7	364 aa	Predicted RBP	28.53	■■■□□ 2.16
PCM1-209	ENST00000518930	JAKMIP1	Q96N16	626 aa	Known RBP	28.53	■■■□□ 2.16
PCM1-209	ENST00000518930	GOPC	Q9HD26	462 aa		28.53	■■■□□ 2.16
PCM1-209	ENST00000518930	HMGB1	P09429	215 aa	Known RBP	28.52	■■■□□ 2.16
PCM1-209	ENST00000518930	ADCK5	Q3MIX3	580 aa		28.52	■■■□□ 2.16
PCM1-209	ENST00000518930	BRI3BP	Q8WY22	251 aa		28.52	■■■□□ 2.16
PCM1-209	ENST00000518930	SYNPO2	Q9UMS6	1093 aa		28.52	■■■□□ 2.16
PCM1-209	ENST00000518930	TESPA1	A2RU30	521 aa	Predicted RBP	28.51	■■■□□ 2.15
PCM1-209	ENST00000518930	RAD21	O60216	631 aa		28.51	■■■□□ 2.15
PCM1-209	ENST00000518930	PSMA5	P28066	241 aa		28.51	■■■□□ 2.15
PCM1-209	ENST00000518930	OTUD7B	Q6GQQ9	843 aa		28.51	■■■□□ 2.15
PCM1-209	ENST00000518930	LRRC47	Q8N1G4	583 aa	Known RBP	28.51	■■■□□ 2.15
PCM1-209	ENST00000518930	TTC14	Q96N46	770 aa		28.51	■■■□□ 2.15
PCM1-209	ENST00000518930	IFIT3	O14879	490 aa	Known RBP	28.5	■■■□□ 2.15
PCM1-209	ENST00000518930	PRC1	O43663	620 aa		28.5	■■■□□ 2.15
PCM1-209	ENST00000518930	ANAPC15	P60006	121 aa		28.5	■■■□□ 2.15
PCM1-209	ENST00000518930	DGKZ	Q13574	1117 aa		28.5	■■■□□ 2.15

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms