RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 C19orf81C9J6K1 198 aa11.14□□□□□ -0.63
CLN8-203ENST00000518780 UBE2Q2LH0YL09 131 aa11.14□□□□□ -0.63
CLN8-203ENST00000518780 CXCL11O14625 94 aa11.14□□□□□ -0.63
CLN8-203ENST00000518780 IFIT3O14879 490 aaKnown RBP11.14□□□□□ -0.63
CLN8-203ENST00000518780 PRC1O43663 620 aa11.14□□□□□ -0.63
CLN8-203ENST00000518780 GDF11O95390 407 aa11.14□□□□□ -0.63
CLN8-203ENST00000518780 APLP1P51693 650 aa11.14□□□□□ -0.63
CLN8-203ENST00000518780 HUNKP57058 714 aa11.14□□□□□ -0.63
CLN8-203ENST00000518780 RRP1BQ14684 758 aaKnown RBP11.14□□□□□ -0.63
CLN8-203ENST00000518780 FAM47AQ5JRC9 791 aa11.14□□□□□ -0.63
CLN8-203ENST00000518780 ZKSCAN4Q969J2 545 aaPredicted RBP11.14□□□□□ -0.63
CLN8-203ENST00000518780 CCDC102AQ96A19 550 aa11.14□□□□□ -0.63
CLN8-203ENST00000518780 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.14□□□□□ -0.63
CLN8-203ENST00000518780 CREBZFQ9NS37 354 aa11.14□□□□□ -0.63
CLN8-203ENST00000518780 TLL2Q9Y6L7 1015 aa11.14□□□□□ -0.63
CLN8-203ENST00000518780 MYH1P12882 1939 aa11.13□□□□□ -0.63
CLN8-203ENST00000518780 CDK5RAP2Q96SN8 1893 aa11.13□□□□□ -0.63
CLN8-203ENST00000518780 ZBTB48P10074 688 aaPredicted RBP11.13□□□□□ -0.63
CLN8-203ENST00000518780 TOP1P11387 765 aaKnown RBP11.13□□□□□ -0.63
CLN8-203ENST00000518780 GUCY1A2P33402 732 aa11.13□□□□□ -0.63
CLN8-203ENST00000518780 RCAN1P53805 252 aa11.13□□□□□ -0.63
CLN8-203ENST00000518780 USP14P54578 494 aa11.13□□□□□ -0.63
CLN8-203ENST00000518780 FGD1P98174 961 aa11.13□□□□□ -0.63
CLN8-203ENST00000518780 ICA1Q05084 483 aa11.13□□□□□ -0.63
CLN8-203ENST00000518780 FMR1Q06787 632 aaKnown RBP eCLIP11.13□□□□□ -0.63
CLN8-203ENST00000518780 PPIL2Q13356 520 aa11.13□□□□□ -0.63
CLN8-203ENST00000518780 SEPT2Q15019 361 aa11.13□□□□□ -0.63
CLN8-203ENST00000518780 RAB3GAP1Q15042 981 aa11.13□□□□□ -0.63
CLN8-203ENST00000518780 TMEM67Q5HYA8 995 aa11.13□□□□□ -0.63
CLN8-203ENST00000518780 CYB5R4Q7L1T6 521 aa11.13□□□□□ -0.63
CLN8-203ENST00000518780 ZNF280CQ8ND82 737 aa11.13□□□□□ -0.63
CLN8-203ENST00000518780 IGDCC4Q8TDY8 1250 aa11.13□□□□□ -0.63
CLN8-203ENST00000518780 CEP95Q96GE4 821 aa11.13□□□□□ -0.63
CLN8-203ENST00000518780 KIF2CQ99661 725 aa11.13□□□□□ -0.63
CLN8-203ENST00000518780 AGXT2Q9BYV1 514 aa11.13□□□□□ -0.63
CLN8-203ENST00000518780 IL17RBQ9NRM6 502 aa11.13□□□□□ -0.63
CLN8-203ENST00000518780 PDRG1Q9NUG6 133 aa11.13□□□□□ -0.63
CLN8-203ENST00000518780 TMX2Q9Y320 296 aa11.13□□□□□ -0.63
CLN8-203ENST00000518780 SNCAIPQ9Y6H5 919 aa11.13□□□□□ -0.63
CLN8-203ENST00000518780 PAPPA2Q9BXP8 1791 aa11.13□□□□□ -0.63
CLN8-203ENST00000518780 TNKSO95271 1327 aa11.12□□□□□ -0.63
CLN8-203ENST00000518780 USP17L10C9JJH3 530 aa11.12□□□□□ -0.63
CLN8-203ENST00000518780 ST18O60284 1047 aa11.12□□□□□ -0.63
CLN8-203ENST00000518780 SLURP2P0DP57 97 aa11.12□□□□□ -0.63
CLN8-203ENST00000518780 EEF2P13639 858 aaKnown RBP11.12□□□□□ -0.63
CLN8-203ENST00000518780 MCM2P49736 904 aa11.12□□□□□ -0.63
CLN8-203ENST00000518780 NEK4P51957 841 aa11.12□□□□□ -0.63
CLN8-203ENST00000518780 EVCP57679 992 aa11.12□□□□□ -0.63
CLN8-203ENST00000518780 ANTXR2P58335 489 aa11.12□□□□□ -0.63
CLN8-203ENST00000518780 WTAPQ15007 396 aa11.12□□□□□ -0.63
CLN8-203ENST00000518780 PPP2R5BQ15173 497 aa11.12□□□□□ -0.63
CLN8-203ENST00000518780 SEC23AQ15436 765 aa11.12□□□□□ -0.63
CLN8-203ENST00000518780 IFIT1BQ5T764 474 aaKnown RBP11.12□□□□□ -0.63
CLN8-203ENST00000518780 RCSD1Q6JBY9 416 aa11.12□□□□□ -0.63
CLN8-203ENST00000518780 RGMBQ6NW40 437 aa11.12□□□□□ -0.63
CLN8-203ENST00000518780 SGMS1Q86VZ5 419 aa11.12□□□□□ -0.63
CLN8-203ENST00000518780 ENAHQ8N8S7 591 aaPredicted RBP11.12□□□□□ -0.63
CLN8-203ENST00000518780 LPAR1Q92633 364 aa11.12□□□□□ -0.63
CLN8-203ENST00000518780 CHMP4CQ96CF2 233 aa11.12□□□□□ -0.63
CLN8-203ENST00000518780 MAP3K14Q99558 947 aa11.12□□□□□ -0.63
CLN8-203ENST00000518780 KIAA1683Q9H0B3 1180 aa11.12□□□□□ -0.63
CLN8-203ENST00000518780 STX8Q9UNK0 236 aa11.12□□□□□ -0.63
CLN8-203ENST00000518780 KCNH4Q9UQ05 1017 aa11.12□□□□□ -0.63
CLN8-203ENST00000518780 AFG3L2Q9Y4W6 797 aa11.12□□□□□ -0.63
CLN8-203ENST00000518780 ZHX2Q9Y6X8 837 aa11.12□□□□□ -0.63
CLN8-203ENST00000518780 BAZ2AQ9UIF9 1905 aaKnown RBP11.11□□□□□ -0.63
CLN8-203ENST00000518780 SH2B2O14492 632 aaPredicted RBP11.11□□□□□ -0.63
CLN8-203ENST00000518780 CALM1P0DP23 149 aa11.11□□□□□ -0.63
CLN8-203ENST00000518780 CALM2P0DP24 149 aa11.11□□□□□ -0.63
CLN8-203ENST00000518780 CALM3P0DP25 149 aa11.11□□□□□ -0.63
CLN8-203ENST00000518780 BACE1P56817 501 aa11.11□□□□□ -0.63
CLN8-203ENST00000518780 INHBEP58166 350 aa11.11□□□□□ -0.63
CLN8-203ENST00000518780 JAG1P78504 1218 aa11.11□□□□□ -0.63
CLN8-203ENST00000518780 SH3D19Q5HYK7 790 aa11.11□□□□□ -0.63
CLN8-203ENST00000518780 SYNE3Q6ZMZ3 975 aa11.11□□□□□ -0.63
CLN8-203ENST00000518780 MOB2Q70IA6 237 aa11.11□□□□□ -0.63
CLN8-203ENST00000518780 SIAH1Q8IUQ4 282 aa11.11□□□□□ -0.63
CLN8-203ENST00000518780 REM2Q8IYK8 340 aaPredicted RBP11.11□□□□□ -0.63
CLN8-203ENST00000518780 GMCL1P1Q8NEA9 526 aa11.11□□□□□ -0.63
CLN8-203ENST00000518780 UPF3BQ9BZI7 483 aaKnown RBP11.11□□□□□ -0.63
CLN8-203ENST00000518780 KAT14Q9H8E8 782 aa11.11□□□□□ -0.63
CLN8-203ENST00000518780 ELP3Q9H9T3 547 aa11.11□□□□□ -0.63
CLN8-203ENST00000518780 GOPCQ9HD26 462 aa11.11□□□□□ -0.63
CLN8-203ENST00000518780 CLIP2Q9UDT6 1046 aa11.11□□□□□ -0.63
CLN8-203ENST00000518780 ABT1Q9ULW3 272 aaKnown RBP11.11□□□□□ -0.63
CLN8-203ENST00000518780 FZD1Q9UP38 647 aa11.11□□□□□ -0.63
CLN8-203ENST00000518780 LAMB1P07942 1786 aa11.11□□□□□ -0.63
CLN8-203ENST00000518780 POLR2AP24928 1970 aaKnown RBP11.1□□□□□ -0.63
CLN8-203ENST00000518780 LAMA4Q16363 1823 aa11.1□□□□□ -0.63
CLN8-203ENST00000518780 CCDC69A6NI79 296 aa11.1□□□□□ -0.63
CLN8-203ENST00000518780 RASSF10A6NK89 507 aa11.1□□□□□ -0.63
CLN8-203ENST00000518780 ZNF157P51786 506 aaPredicted RBP11.1□□□□□ -0.63
CLN8-203ENST00000518780 GTF2A2P52657 109 aa11.1□□□□□ -0.63
CLN8-203ENST00000518780 SPP2Q13103 211 aa11.1□□□□□ -0.63
CLN8-203ENST00000518780 SNAPC2Q13487 334 aa11.1□□□□□ -0.63
CLN8-203ENST00000518780 SPRYD7Q5W111 196 aa11.1□□□□□ -0.63
CLN8-203ENST00000518780 USP17L2Q6R6M4 530 aa11.1□□□□□ -0.63
CLN8-203ENST00000518780 Q6ZUG5 572 aa11.1□□□□□ -0.63
CLN8-203ENST00000518780 FASTKD5Q7L8L6 764 aaKnown RBP11.1□□□□□ -0.63
CLN8-203ENST00000518780 CATIPQ7Z7H3 387 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms