RNA–Protein interactions for RNA: ENST00000518678.1

TRAM1-202, Transcript of translocation associated membrane protein 1, humanhuman

TSL 4

Gene TRAM1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-202ENST00000518678 NEDD1Q8NHV4 660 aa20.95■□□□□ 0.94
TRAM1-202ENST00000518678 NKX2-3Q8TAU0 364 aa20.95■□□□□ 0.94
TRAM1-202ENST00000518678 BEGAINQ9BUH8 593 aa20.95■□□□□ 0.94
TRAM1-202ENST00000518678 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.95■□□□□ 0.94
TRAM1-202ENST00000518678 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.95■□□□□ 0.94
TRAM1-202ENST00000518678 SNX14Q9Y5W7 946 aa20.95■□□□□ 0.94
TRAM1-202ENST00000518678 IGKV6D-41A0A0C4DH26 115 aa20.94■□□□□ 0.94
TRAM1-202ENST00000518678 USP17L5A8MUK1 530 aa20.94■□□□□ 0.94
TRAM1-202ENST00000518678 B4E1Z4 1266 aa20.94■□□□□ 0.94
TRAM1-202ENST00000518678 SEPT2Q15019 361 aa20.94■□□□□ 0.94
TRAM1-202ENST00000518678 NCOA7Q8NI08 942 aa20.94■□□□□ 0.94
TRAM1-202ENST00000518678 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.94■□□□□ 0.94
TRAM1-202ENST00000518678 PHIPQ8WWQ0 1821 aa20.94■□□□□ 0.94
TRAM1-202ENST00000518678 KDM4AO75164 1064 aa20.93■□□□□ 0.94
TRAM1-202ENST00000518678 PPATQ06203 517 aa20.93■□□□□ 0.94
TRAM1-202ENST00000518678 MKRN3Q13064 507 aaKnown RBP20.93■□□□□ 0.94
TRAM1-202ENST00000518678 RAB3GAP1Q15042 981 aa20.93■□□□□ 0.94
TRAM1-202ENST00000518678 RALYLQ86SE5 291 aaKnown RBP20.93■□□□□ 0.94
TRAM1-202ENST00000518678 CNKSR2Q8WXI2 1034 aa20.93■□□□□ 0.94
TRAM1-202ENST00000518678 OPTNQ96CV9 577 aa20.93■□□□□ 0.94
TRAM1-202ENST00000518678 TBC1D2Q9BYX2 928 aa20.93■□□□□ 0.94
TRAM1-202ENST00000518678 CCDC84Q86UT8 332 aaPredicted RBP20.92■□□□□ 0.94
TRAM1-202ENST00000518678 MB21D2Q8IYB1 491 aaPredicted RBP20.92■□□□□ 0.94
TRAM1-202ENST00000518678 OTUD5Q96G74 571 aa20.92■□□□□ 0.94
TRAM1-202ENST00000518678 WNK4Q96J92 1243 aa20.92■□□□□ 0.94
TRAM1-202ENST00000518678 WDR18Q9BV38 432 aa20.92■□□□□ 0.94
TRAM1-202ENST00000518678 KANSL2Q9H9L4 492 aa20.92■□□□□ 0.94
TRAM1-202ENST00000518678 AS3MTQ9HBK9 375 aa20.92■□□□□ 0.94
TRAM1-202ENST00000518678 ZSWIM5Q9P217 1185 aa20.92■□□□□ 0.94
TRAM1-202ENST00000518678 ZHX2Q9Y6X8 837 aa20.92■□□□□ 0.94
TRAM1-202ENST00000518678 GJA5P36382 358 aa20.91■□□□□ 0.94
TRAM1-202ENST00000518678 ANAPC15P60006 121 aa20.91■□□□□ 0.94
TRAM1-202ENST00000518678 PPIL2Q13356 520 aa20.91■□□□□ 0.94
TRAM1-202ENST00000518678 ADCK5Q3MIX3 580 aa20.91■□□□□ 0.94
TRAM1-202ENST00000518678 SPRYD7Q5W111 196 aa20.91■□□□□ 0.94
TRAM1-202ENST00000518678 CCDC102AQ96A19 550 aa20.91■□□□□ 0.94
TRAM1-202ENST00000518678 NEK1Q96PY6 1258 aa20.91■□□□□ 0.94
TRAM1-202ENST00000518678 UPF2Q9HAU5 1272 aaKnown RBP20.91■□□□□ 0.94
TRAM1-202ENST00000518678 IL17RBQ9NRM6 502 aa20.91■□□□□ 0.94
TRAM1-202ENST00000518678 TCP11L1Q9NUJ3 509 aa20.91■□□□□ 0.94
TRAM1-202ENST00000518678 AFG3L2Q9Y4W6 797 aa20.91■□□□□ 0.94
TRAM1-202ENST00000518678 ZBTB48P10074 688 aaPredicted RBP20.9■□□□□ 0.94
TRAM1-202ENST00000518678 ICA1Q05084 483 aa20.9■□□□□ 0.94
TRAM1-202ENST00000518678 CYB5R4Q7L1T6 521 aa20.9■□□□□ 0.94
TRAM1-202ENST00000518678 CLEC10AQ8IUN9 316 aa20.9■□□□□ 0.94
TRAM1-202ENST00000518678 CEP95Q96GE4 821 aa20.9■□□□□ 0.94
TRAM1-202ENST00000518678 MTMR4Q9NYA4 1195 aa20.9■□□□□ 0.94
TRAM1-202ENST00000518678 NMT2O60551 498 aa20.89■□□□□ 0.93
TRAM1-202ENST00000518678 TRPA1O75762 1119 aa20.89■□□□□ 0.93
TRAM1-202ENST00000518678 PPP4R3BQ5MIZ7 849 aa20.89■□□□□ 0.93
TRAM1-202ENST00000518678 IQCA1Q86XH1 822 aa20.89■□□□□ 0.93
TRAM1-202ENST00000518678 SIAH1Q8IUQ4 282 aa20.89■□□□□ 0.93
TRAM1-202ENST00000518678 ZNF280CQ8ND82 737 aa20.89■□□□□ 0.93
TRAM1-202ENST00000518678 IL17RAQ96F46 866 aa20.89■□□□□ 0.93
TRAM1-202ENST00000518678 C22orf23Q9BZE7 217 aa20.89■□□□□ 0.93
TRAM1-202ENST00000518678 RNF186Q9NXI6 227 aa20.89■□□□□ 0.93
TRAM1-202ENST00000518678 NYAP2Q9P242 653 aa20.89■□□□□ 0.93
TRAM1-202ENST00000518678 KCNH4Q9UQ05 1017 aa20.89■□□□□ 0.93
TRAM1-202ENST00000518678 CXCL11O14625 94 aa20.88■□□□□ 0.93
TRAM1-202ENST00000518678 IRF6O14896 467 aa20.88■□□□□ 0.93
TRAM1-202ENST00000518678 HMGB1P09429 215 aaKnown RBP20.88■□□□□ 0.93
TRAM1-202ENST00000518678 EEF2P13639 858 aaKnown RBP20.88■□□□□ 0.93
TRAM1-202ENST00000518678 PSMA5P28066 241 aa20.88■□□□□ 0.93
TRAM1-202ENST00000518678 MCM5P33992 734 aa20.88■□□□□ 0.93
TRAM1-202ENST00000518678 NOVP48745 357 aa20.88■□□□□ 0.93
TRAM1-202ENST00000518678 ANTXR2P58335 489 aa20.88■□□□□ 0.93
TRAM1-202ENST00000518678 SPP2Q13103 211 aa20.88■□□□□ 0.93
TRAM1-202ENST00000518678 COL9A3Q14050 684 aaPredicted RBP20.88■□□□□ 0.93
TRAM1-202ENST00000518678 CCDC178Q5BJE1 867 aa20.88■□□□□ 0.93
TRAM1-202ENST00000518678 JAKMIP1Q96N16 626 aaKnown RBP20.88■□□□□ 0.93
TRAM1-202ENST00000518678 ZSCAN10Q96SZ4 725 aaPredicted RBP20.88■□□□□ 0.93
TRAM1-202ENST00000518678 ARHGEF10LQ9HCE6 1279 aa20.88■□□□□ 0.93
TRAM1-202ENST00000518678 TRIM75PA6NK02 468 aa20.87■□□□□ 0.93
TRAM1-202ENST00000518678 TTLL1O95922 423 aa20.87■□□□□ 0.93
TRAM1-202ENST00000518678 RBM25P49756 843 aaKnown RBP20.87■□□□□ 0.93
TRAM1-202ENST00000518678 ACER1Q8TDN7 264 aa20.87■□□□□ 0.93
TRAM1-202ENST00000518678 ABHD8Q96I13 439 aa20.87■□□□□ 0.93
TRAM1-202ENST00000518678 ZKSCAN3Q9BRR0 538 aa20.87■□□□□ 0.93
TRAM1-202ENST00000518678 UBAC1Q9BSL1 405 aa20.87■□□□□ 0.93
TRAM1-202ENST00000518678 MTA3Q9BTC8 594 aa20.87■□□□□ 0.93
TRAM1-202ENST00000518678 TM6SF1Q9BZW5 370 aa20.87■□□□□ 0.93
TRAM1-202ENST00000518678 A0A1W2PRG0 241 aa20.86■□□□□ 0.93
TRAM1-202ENST00000518678 USP17L10C9JJH3 530 aa20.86■□□□□ 0.93
TRAM1-202ENST00000518678 PRC1O43663 620 aa20.86■□□□□ 0.93
TRAM1-202ENST00000518678 ATP2B2Q01814 1243 aa20.86■□□□□ 0.93
TRAM1-202ENST00000518678 DHX32Q7L7V1 743 aaKnown RBP20.86■□□□□ 0.93
TRAM1-202ENST00000518678 MKL1Q969V6 931 aa20.86■□□□□ 0.93
TRAM1-202ENST00000518678 TTC14Q96N46 770 aa20.86■□□□□ 0.93
TRAM1-202ENST00000518678 CLIP2Q9UDT6 1046 aa20.86■□□□□ 0.93
TRAM1-202ENST00000518678 TNKSO95271 1327 aa20.85■□□□□ 0.93
TRAM1-202ENST00000518678 WDR19Q8NEZ3 1342 aa20.85■□□□□ 0.93
TRAM1-202ENST00000518678 PTPRFP10586 1907 aa20.85■□□□□ 0.93
TRAM1-202ENST00000518678 MYH4Q9Y623 1939 aa20.85■□□□□ 0.93
TRAM1-202ENST00000518678 BACE1P56817 501 aa20.85■□□□□ 0.93
TRAM1-202ENST00000518678 EXOSC10Q01780 885 aaKnown RBP20.85■□□□□ 0.93
TRAM1-202ENST00000518678 SNAPC2Q13487 334 aa20.85■□□□□ 0.93
TRAM1-202ENST00000518678 MTMR2Q13614 643 aa20.85■□□□□ 0.93
TRAM1-202ENST00000518678 RCSD1Q6JBY9 416 aa20.85■□□□□ 0.93
TRAM1-202ENST00000518678 BLOC1S2Q6QNY1 142 aa20.85■□□□□ 0.93
TRAM1-202ENST00000518678 CHST3Q7LGC8 479 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms