RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 MFSD14CQ5VZR4 134 aa13.93□□□□□ -0.18
CTNNA1-205ENST00000517904 TRPV1Q8NER1 839 aa13.93□□□□□ -0.18
CTNNA1-205ENST00000517904 NPLOC4Q8TAT6 608 aa13.93□□□□□ -0.18
CTNNA1-205ENST00000517904 LPAR1Q92633 364 aa13.93□□□□□ -0.18
CTNNA1-205ENST00000517904 LBHD1Q9BQE6 289 aaPredicted RBP13.93□□□□□ -0.18
CTNNA1-205ENST00000517904 CWC22Q9HCG8 908 aaKnown RBP13.93□□□□□ -0.18
CTNNA1-205ENST00000517904 BTBD7Q9P203 1132 aa13.93□□□□□ -0.18
CTNNA1-205ENST00000517904 MYH1P12882 1939 aa13.93□□□□□ -0.18
CTNNA1-205ENST00000517904 RLFQ13129 1914 aa13.93□□□□□ -0.18
CTNNA1-205ENST00000517904 SLC15A5A6NIM6 579 aa13.92□□□□□ -0.18
CTNNA1-205ENST00000517904 USP17L15C9J2P7 530 aa13.92□□□□□ -0.18
CTNNA1-205ENST00000517904 USP17L13C9JLJ4 530 aa13.92□□□□□ -0.18
CTNNA1-205ENST00000517904 USP17L11C9JVI0 530 aa13.92□□□□□ -0.18
CTNNA1-205ENST00000517904 USP17L18D6R9N7 530 aa13.92□□□□□ -0.18
CTNNA1-205ENST00000517904 USP17L22D6RA61 530 aa13.92□□□□□ -0.18
CTNNA1-205ENST00000517904 USP17L17D6RBQ6 530 aa13.92□□□□□ -0.18
CTNNA1-205ENST00000517904 USP17L19D6RCP7 530 aa13.92□□□□□ -0.18
CTNNA1-205ENST00000517904 USP17L20D6RJB6 530 aa13.92□□□□□ -0.18
CTNNA1-205ENST00000517904 DNM1LO00429 736 aa13.92□□□□□ -0.18
CTNNA1-205ENST00000517904 IGHA2P01877 340 aa13.92□□□□□ -0.18
CTNNA1-205ENST00000517904 HLA-DOAP06340 250 aa13.92□□□□□ -0.18
CTNNA1-205ENST00000517904 HOXC6P09630 235 aa13.92□□□□□ -0.18
CTNNA1-205ENST00000517904 VCAM1P19320 739 aa13.92□□□□□ -0.18
CTNNA1-205ENST00000517904 CYP2C19P33261 490 aa13.92□□□□□ -0.18
CTNNA1-205ENST00000517904 RARSP54136 660 aaKnown RBP13.92□□□□□ -0.18
CTNNA1-205ENST00000517904 RTP1P59025 263 aa13.92□□□□□ -0.18
CTNNA1-205ENST00000517904 CCNA1P78396 465 aa13.92□□□□□ -0.18
CTNNA1-205ENST00000517904 USP17L24Q0WX57 530 aa13.92□□□□□ -0.18
CTNNA1-205ENST00000517904 G3BP1Q13283 466 aaKnown RBP eCLIP13.92□□□□□ -0.181e-7■■■□□ 16
CTNNA1-205ENST00000517904 GRB14Q14449 540 aa13.92□□□□□ -0.18
CTNNA1-205ENST00000517904 ZNF697Q5TEC3 545 aa13.92□□□□□ -0.18
CTNNA1-205ENST00000517904 WDR78Q5VTH9 848 aa13.92□□□□□ -0.18
CTNNA1-205ENST00000517904 CATSPERGQ6ZRH7 1159 aa13.92□□□□□ -0.18
CTNNA1-205ENST00000517904 CDX2Q99626 313 aaPredicted RBP13.92□□□□□ -0.18
CTNNA1-205ENST00000517904 DBNDD2Q9BQY9 259 aa13.92□□□□□ -0.18
CTNNA1-205ENST00000517904 PIH1D3Q9NQM4 214 aaKnown RBP13.92□□□□□ -0.18
CTNNA1-205ENST00000517904 TNNQ9UQP3 1299 aa13.92□□□□□ -0.18
CTNNA1-205ENST00000517904 ZNF316A6NFI3 1004 aaPredicted RBP13.91□□□□□ -0.18
CTNNA1-205ENST00000517904 MSCO60682 206 aa13.91□□□□□ -0.18
CTNNA1-205ENST00000517904 GLRX3O76003 335 aaKnown RBP13.91□□□□□ -0.18
CTNNA1-205ENST00000517904 CYBAP13498 195 aa13.91□□□□□ -0.18
CTNNA1-205ENST00000517904 CNGA1P29973 690 aa13.91□□□□□ -0.18
CTNNA1-205ENST00000517904 SHHQ15465 462 aa13.91□□□□□ -0.18
CTNNA1-205ENST00000517904 TNNI3KQ59H18 835 aa13.91□□□□□ -0.18
CTNNA1-205ENST00000517904 TTC39AQ5SRH9 613 aa13.91□□□□□ -0.18
CTNNA1-205ENST00000517904 C9orf50Q5SZB4 431 aa13.91□□□□□ -0.18
CTNNA1-205ENST00000517904 GJC2Q5T442 439 aaPredicted RBP13.91□□□□□ -0.18
CTNNA1-205ENST00000517904 TATDN1Q6P1N9 297 aa13.91□□□□□ -0.18
CTNNA1-205ENST00000517904 LBX2Q6XYB7 198 aa13.91□□□□□ -0.18
CTNNA1-205ENST00000517904 ACER1Q8TDN7 264 aa13.91□□□□□ -0.18
CTNNA1-205ENST00000517904 ARHGAP45Q92619 1136 aa13.91□□□□□ -0.18
CTNNA1-205ENST00000517904 FEZ1Q99689 392 aa13.91□□□□□ -0.18
CTNNA1-205ENST00000517904 FPGT-TNNI3KV9GXZ4 949 aa13.91□□□□□ -0.18
CTNNA1-205ENST00000517904 SPDYE16A6NNV3 312 aaPredicted RBP13.9□□□□□ -0.18
CTNNA1-205ENST00000517904 GNAI2P04899 355 aa13.9□□□□□ -0.18
CTNNA1-205ENST00000517904 ZAP70P43403 619 aa13.9□□□□□ -0.18
CTNNA1-205ENST00000517904 ATP2B2Q01814 1243 aa13.9□□□□□ -0.18
CTNNA1-205ENST00000517904 RAB3GAP1Q15042 981 aa13.9□□□□□ -0.18
CTNNA1-205ENST00000517904 ATF7IPQ6VMQ6 1270 aa13.9□□□□□ -0.18
CTNNA1-205ENST00000517904 KIAA1683Q9H0B3 1180 aa13.9□□□□□ -0.18
CTNNA1-205ENST00000517904 GPR108Q9NPR9 543 aa13.9□□□□□ -0.18
CTNNA1-205ENST00000517904 PRKAG2Q9UGJ0 569 aa13.9□□□□□ -0.18
CTNNA1-205ENST00000517904 ATP11BQ9Y2G3 1177 aa13.9□□□□□ -0.18
CTNNA1-205ENST00000517904 TRIM27P14373 513 aa13.89□□□□□ -0.19
CTNNA1-205ENST00000517904 CYP7A1P22680 504 aa13.89□□□□□ -0.19
CTNNA1-205ENST00000517904 USP14P54578 494 aa13.89□□□□□ -0.19
CTNNA1-205ENST00000517904 CCDC158Q5M9N0 1113 aa13.89□□□□□ -0.19
CTNNA1-205ENST00000517904 MIGA1Q8NAN2 632 aa13.89□□□□□ -0.19
CTNNA1-205ENST00000517904 ZNF512BQ96KM6 892 aaPredicted RBP13.89□□□□□ -0.19
CTNNA1-205ENST00000517904 SEMA6BQ9H3T3 888 aa13.89□□□□□ -0.19
CTNNA1-205ENST00000517904 SERPINB13Q9UIV8 391 aa13.89□□□□□ -0.19
CTNNA1-205ENST00000517904 IVNS1ABPQ9Y6Y0 642 aa13.89□□□□□ -0.19
CTNNA1-205ENST00000517904 ZNF236Q9UL36 1845 aa13.89□□□□□ -0.19
CTNNA1-205ENST00000517904 ANO1Q5XXA6 986 aa13.88□□□□□ -0.19
CTNNA1-205ENST00000517904 SLC39A5Q6ZMH5 540 aa13.88□□□□□ -0.19
CTNNA1-205ENST00000517904 MAFAQ8NHW3 353 aaPredicted RBP13.88□□□□□ -0.19
CTNNA1-205ENST00000517904 EHD4Q9H223 541 aa13.88□□□□□ -0.19
CTNNA1-205ENST00000517904 TTYH1Q9H313 450 aaPredicted RBP13.88□□□□□ -0.19
CTNNA1-205ENST00000517904 RPAP3Q9H6T3 665 aaPredicted RBP13.88□□□□□ -0.19
CTNNA1-205ENST00000517904 TLR7Q9NYK1 1049 aaKnown RBP13.88□□□□□ -0.19
CTNNA1-205ENST00000517904 A0A0G2JMZ2 1700 aa13.87□□□□□ -0.19
CTNNA1-205ENST00000517904 CHD9Q3L8U1 2897 aa13.87□□□□□ -0.19
CTNNA1-205ENST00000517904 ADORA2AP29274 412 aa13.87□□□□□ -0.19
CTNNA1-205ENST00000517904 GUCY1A2P33402 732 aa13.87□□□□□ -0.19
CTNNA1-205ENST00000517904 SHMT1P34896 483 aa13.87□□□□□ -0.19
CTNNA1-205ENST00000517904 POLA2Q14181 598 aa13.87□□□□□ -0.19
CTNNA1-205ENST00000517904 SNX17Q15036 470 aa13.87□□□□□ -0.19
CTNNA1-205ENST00000517904 ABCB5Q2M3G0 1257 aa13.87□□□□□ -0.19
CTNNA1-205ENST00000517904 TRIM60Q495X7 471 aa13.87□□□□□ -0.19
CTNNA1-205ENST00000517904 CERKLQ49MI3 558 aaPredicted RBP13.87□□□□□ -0.19
CTNNA1-205ENST00000517904 SH3RF1Q7Z6J0 888 aa13.87□□□□□ -0.19
CTNNA1-205ENST00000517904 MYLIPQ8WY64 445 aa13.87□□□□□ -0.19
CTNNA1-205ENST00000517904 BADQ92934 168 aa13.87□□□□□ -0.19
CTNNA1-205ENST00000517904 MOV10L1Q9BXT6 1211 aaKnown RBP13.87□□□□□ -0.19
CTNNA1-205ENST00000517904 PRDM5Q9NQX1 630 aaPredicted RBP13.87□□□□□ -0.19
CTNNA1-205ENST00000517904 PDLIM7Q9NR12 457 aa13.87□□□□□ -0.19
CTNNA1-205ENST00000517904 DBNLQ9UJU6 430 aaKnown RBP13.87□□□□□ -0.19
CTNNA1-205ENST00000517904 TRIM43BA6NCK2 446 aa13.86□□□□□ -0.19
CTNNA1-205ENST00000517904 IGSF3O75054 1194 aa13.86□□□□□ -0.19
CTNNA1-205ENST00000517904 USP5P45974 858 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms