RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 PIM2Q9P1W9 311 aa6.3□□□□□ -1.4
SCARNA20.4-201ENST00000516969 ATF5Q9Y2D1 282 aaPredicted RBP6.3□□□□□ -1.4
SCARNA20.4-201ENST00000516969 PLIN4Q96Q06 1357 aa6.3□□□□□ -1.4
SCARNA20.4-201ENST00000516969 COL4A5P29400 1685 aa6.3□□□□□ -1.4
SCARNA20.4-201ENST00000516969 ARFGEF1Q9Y6D6 1849 aa6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 IGKV6D-41A0A0C4DH26 115 aa6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 LETM1O95202 739 aaPredicted RBP6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 PLEKHA8P1O95397 391 aa6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 MMP1P03956 469 aa6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 XRCC6P12956 609 aaKnown RBP eCLIP6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 POLD1P28340 1107 aa6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 KIF5BP33176 963 aa6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 NASPP49321 788 aaPredicted RBP6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 MRE11P49959 708 aa6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 NFIAQ12857 509 aa6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 GRM4Q14833 912 aa6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 DALRD3Q5D0E6 543 aaKnown RBP6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 CCDC183Q5T5S1 534 aa6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 L1TD1Q5T7N2 865 aaKnown RBP6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 MYSM1Q5VVJ2 828 aa6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 RSBN1LQ6PCB5 846 aaPredicted RBP6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 LRSAM1Q6UWE0 723 aa6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 ZFPM1Q8IX07 1006 aa6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 SRBD1Q8N5C6 995 aaKnown RBP6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 LINC00301Q8NCQ3 95 aa6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 PNMA1Q8ND90 353 aa6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 UPF1Q92900 1129 aaKnown RBP eCLIP6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 SHISA4Q96DD7 197 aa6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 TMEM47Q9BQJ4 181 aa6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 DHX36Q9H2U1 1008 aaKnown RBP6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 FOXP1Q9H334 677 aaPredicted RBP6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 KAT14Q9H8E8 782 aa6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 ZNF277Q9NRM2 450 aaPredicted RBP6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 FAM198AQ9UFP1 575 aa6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 SWAP70Q9UH65 585 aa6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 MAD2L2Q9UI95 211 aa6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 SERPINB13Q9UIV8 391 aa6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 PCDHAC2Q9Y5I4 1007 aa6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 CD2APQ9Y5K6 639 aa6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 V9GY48 417 aaPredicted RBP6.29□□□□□ -1.4
SCARNA20.4-201ENST00000516969 CNTNAP5Q8WYK1 1306 aa6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 PALM3A6NDB9 673 aaPredicted RBP6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 PSMD14O00487 310 aa6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 ENTPD3O75355 529 aa6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 YEATS4O95619 227 aa6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 TOP1P11387 765 aaKnown RBP6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 LIG1P18858 919 aa6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 SMARCA1P28370 1054 aa6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 SHMT1P34896 483 aa6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 PTGER2P43116 358 aa6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 GNAQP50148 359 aa6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 TOB1P50616 345 aaPredicted RBP6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 AKAP17AQ02040 695 aaKnown RBP6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 PICALMQ13492 652 aa6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 TRIM29Q14134 588 aa6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 SLC39A14Q15043 492 aa6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 SLC35G1Q2M3R5 365 aa6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 CFAP100Q494V2 611 aa6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 ADALQ6DHV7 355 aa6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 SH3BP5LQ7L8J4 393 aa6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 FOXP4Q8IVH2 680 aaPredicted RBP6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 LARGE2Q8N3Y3 721 aa6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 CCDC82Q8N4S0 544 aa6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 MTMR14Q8NCE2 650 aa6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 CTCFLQ8NI51 663 aaPredicted RBP6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 CEP95Q96GE4 821 aa6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 PRMT6Q96LA8 375 aaPredicted RBP6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 LZTS2Q9BRK4 669 aa6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 PHF20Q9BVI0 1012 aa6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 FTOQ9C0B1 505 aaKnown RBP eCLIP6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 GRPEL1Q9HAV7 217 aa6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 MTMR4Q9NYA4 1195 aa6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 ZNRF3Q9ULT6 936 aa6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 CLIC4Q9Y696 253 aa6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 COL2A1P02458 1487 aaPredicted RBP6.28□□□□□ -1.4
SCARNA20.4-201ENST00000516969 DICER1Q9UPY3 1922 aaKnown RBP6.27□□□□□ -1.41
SCARNA20.4-201ENST00000516969 A0A1W2PQ27 194 aa6.27□□□□□ -1.41
SCARNA20.4-201ENST00000516969 A0A1W2PQ64 194 aa6.27□□□□□ -1.41
SCARNA20.4-201ENST00000516969 A0A1W2PQD8 194 aa6.27□□□□□ -1.41
SCARNA20.4-201ENST00000516969 SYCE3A1L190 88 aa6.27□□□□□ -1.41
SCARNA20.4-201ENST00000516969 GOLGA6L4A6NEF3 574 aa6.27□□□□□ -1.41
SCARNA20.4-201ENST00000516969 DDTLA6NHG4 134 aaPredicted RBP6.27□□□□□ -1.41
SCARNA20.4-201ENST00000516969 SPDYE2BA6NHP3 402 aa6.27□□□□□ -1.41
SCARNA20.4-201ENST00000516969 BTBD18B2RXH4 712 aa6.27□□□□□ -1.41
SCARNA20.4-201ENST00000516969 SPTLC2O15270 562 aa6.27□□□□□ -1.41
SCARNA20.4-201ENST00000516969 CYTH3O43739 400 aa6.27□□□□□ -1.41
SCARNA20.4-201ENST00000516969 RAD17O75943 681 aa6.27□□□□□ -1.41
SCARNA20.4-201ENST00000516969 HLA-DOAP06340 250 aa6.27□□□□□ -1.41
SCARNA20.4-201ENST00000516969 SPDYE6P0CI01 402 aa6.27□□□□□ -1.41
SCARNA20.4-201ENST00000516969 AKR1B1P15121 316 aa6.27□□□□□ -1.41
SCARNA20.4-201ENST00000516969 VEGFAP15692 232 aaPredicted RBP6.27□□□□□ -1.41
SCARNA20.4-201ENST00000516969 XBP1P17861 261 aa6.27□□□□□ -1.41
SCARNA20.4-201ENST00000516969 MMP14P50281 582 aa6.27□□□□□ -1.41
SCARNA20.4-201ENST00000516969 RBM5P52756 815 aaKnown RBP eCLIP6.27□□□□□ -1.41
SCARNA20.4-201ENST00000516969 CEBPZQ03701 1054 aaKnown RBP6.27□□□□□ -1.41
SCARNA20.4-201ENST00000516969 CXCL9Q07325 125 aa6.27□□□□□ -1.41
SCARNA20.4-201ENST00000516969 SNW1Q13573 536 aaKnown RBP6.27□□□□□ -1.41
SCARNA20.4-201ENST00000516969 R3HDM1Q15032 1099 aaKnown RBP6.27□□□□□ -1.41
SCARNA20.4-201ENST00000516969 PTPAQ15257 358 aa6.27□□□□□ -1.41
SCARNA20.4-201ENST00000516969 SAFBQ15424 915 aaKnown RBP eCLIP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms