RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 CCDC17Q96LX7 622 aa8.89□□□□□ -0.99
SCARNA20.1-201ENST00000516009 SYT17Q9BSW7 474 aa8.89□□□□□ -0.99
SCARNA20.1-201ENST00000516009 MYOZ2Q9NPC6 264 aa8.89□□□□□ -0.99
SCARNA20.1-201ENST00000516009 ZNF70Q9UC06 446 aaPredicted RBP8.89□□□□□ -0.99
SCARNA20.1-201ENST00000516009 STX8Q9UNK0 236 aa8.89□□□□□ -0.99
SCARNA20.1-201ENST00000516009 GJA3Q9Y6H8 435 aa8.89□□□□□ -0.99
SCARNA20.1-201ENST00000516009 DDTLA6NHG4 134 aaPredicted RBP8.88□□□□□ -0.99
SCARNA20.1-201ENST00000516009 TCP10L2B9ZVM9 353 aa8.88□□□□□ -0.99
SCARNA20.1-201ENST00000516009 FMNL1O95466 1100 aaPredicted RBP8.88□□□□□ -0.99
SCARNA20.1-201ENST00000516009 TOP1P11387 765 aaKnown RBP8.88□□□□□ -0.99
SCARNA20.1-201ENST00000516009 KIF5BP33176 963 aa8.88□□□□□ -0.99
SCARNA20.1-201ENST00000516009 GMPSP49915 693 aaPredicted RBP8.88□□□□□ -0.99
SCARNA20.1-201ENST00000516009 AKAP17AQ02040 695 aaKnown RBP8.88□□□□□ -0.99
SCARNA20.1-201ENST00000516009 FOXD4L6Q3SYB3 417 aaPredicted RBP8.88□□□□□ -0.99
SCARNA20.1-201ENST00000516009 FOXD4L3Q6VB84 417 aaPredicted RBP8.88□□□□□ -0.99
SCARNA20.1-201ENST00000516009 SH3BP5LQ7L8J4 393 aa8.88□□□□□ -0.99
SCARNA20.1-201ENST00000516009 FERMT3Q86UX7 667 aa8.88□□□□□ -0.99
SCARNA20.1-201ENST00000516009 RGS22Q8NE09 1264 aa8.88□□□□□ -0.99
SCARNA20.1-201ENST00000516009 FAM151AQ8WW52 585 aa8.88□□□□□ -0.99
SCARNA20.1-201ENST00000516009 WASF1Q92558 559 aa8.88□□□□□ -0.99
SCARNA20.1-201ENST00000516009 DPF2Q92785 391 aa8.88□□□□□ -0.99
SCARNA20.1-201ENST00000516009 CEP95Q96GE4 821 aa8.88□□□□□ -0.99
SCARNA20.1-201ENST00000516009 ZBED3Q96IU2 234 aaPredicted RBP8.88□□□□□ -0.99
SCARNA20.1-201ENST00000516009 MAP3K14Q99558 947 aa8.88□□□□□ -0.99
SCARNA20.1-201ENST00000516009 ALG1Q9BT22 464 aa8.88□□□□□ -0.99
SCARNA20.1-201ENST00000516009 SLC26A6Q9BXS9 759 aa8.88□□□□□ -0.99
SCARNA20.1-201ENST00000516009 ZSCAN16Q9H4T2 348 aaPredicted RBP8.88□□□□□ -0.99
SCARNA20.1-201ENST00000516009 VEZTQ9HBM0 779 aa8.88□□□□□ -0.99
SCARNA20.1-201ENST00000516009 MPHOSPH10O00566 681 aaKnown RBP8.87□□□□□ -0.99
SCARNA20.1-201ENST00000516009 WNT10BO00744 389 aa8.87□□□□□ -0.99
SCARNA20.1-201ENST00000516009 DEXIO95424 95 aa8.87□□□□□ -0.99
SCARNA20.1-201ENST00000516009 AKR1B1P15121 316 aa8.87□□□□□ -0.99
SCARNA20.1-201ENST00000516009 NCLP19338 710 aaKnown RBP8.87□□□□□ -0.99
SCARNA20.1-201ENST00000516009 TNNI2P48788 182 aa8.87□□□□□ -0.99
SCARNA20.1-201ENST00000516009 GNAQP50148 359 aa8.87□□□□□ -0.99
SCARNA20.1-201ENST00000516009 GUCY1B3Q02153 619 aa8.87□□□□□ -0.99
SCARNA20.1-201ENST00000516009 RESTQ13127 1097 aa8.87□□□□□ -0.99
SCARNA20.1-201ENST00000516009 TRIM29Q14134 588 aa8.87□□□□□ -0.99
SCARNA20.1-201ENST00000516009 GRM4Q14833 912 aa8.87□□□□□ -0.99
SCARNA20.1-201ENST00000516009 CSPP1Q1MSJ5 1256 aa8.87□□□□□ -0.99
SCARNA20.1-201ENST00000516009 SKOR2Q2VWA4 1001 aaPredicted RBP8.87□□□□□ -0.99
SCARNA20.1-201ENST00000516009 PPP4R3BQ5MIZ7 849 aa8.87□□□□□ -0.99
SCARNA20.1-201ENST00000516009 TMTC3Q6ZXV5 915 aa8.87□□□□□ -0.99
SCARNA20.1-201ENST00000516009 FAM83AQ86UY5 434 aa8.87□□□□□ -0.99
SCARNA20.1-201ENST00000516009 METTL16Q86W50 562 aaKnown RBP8.87□□□□□ -0.99
SCARNA20.1-201ENST00000516009 CCDC82Q8N4S0 544 aa8.87□□□□□ -0.99
SCARNA20.1-201ENST00000516009 FBXO18Q8NFZ0 1043 aa8.87□□□□□ -0.99
SCARNA20.1-201ENST00000516009 CHAMP1Q96JM3 812 aa8.87□□□□□ -0.99
SCARNA20.1-201ENST00000516009 CSRNP1Q96S65 589 aa8.87□□□□□ -0.99
SCARNA20.1-201ENST00000516009 TMEM47Q9BQJ4 181 aa8.87□□□□□ -0.99
SCARNA20.1-201ENST00000516009 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.87□□□□□ -0.99
SCARNA20.1-201ENST00000516009 RNF26Q9BY78 433 aaPredicted RBP8.87□□□□□ -0.99
SCARNA20.1-201ENST00000516009 CNOT7Q9UIV1 285 aaKnown RBP8.87□□□□□ -0.99
SCARNA20.1-201ENST00000516009 CNTNAP1P78357 1384 aa8.86□□□□□ -0.99
SCARNA20.1-201ENST00000516009 BAZ2BQ9UIF8 2168 aaKnown RBP8.86□□□□□ -0.99
SCARNA20.1-201ENST00000516009 ZNF541Q9H0D2 1346 aa8.86□□□□□ -0.99
SCARNA20.1-201ENST00000516009 IGKV6D-41A0A0C4DH26 115 aa8.86□□□□□ -0.99
SCARNA20.1-201ENST00000516009 SHTN1A0MZ66 631 aa8.86□□□□□ -0.99
SCARNA20.1-201ENST00000516009 FAM196BA6NMK8 535 aa8.86□□□□□ -0.99
SCARNA20.1-201ENST00000516009 PRPF3O43395 683 aaKnown RBP8.86□□□□□ -0.99
SCARNA20.1-201ENST00000516009 TRAK2O60296 914 aa8.86□□□□□ -0.99
SCARNA20.1-201ENST00000516009 PRPF40AO75400 957 aaKnown RBP8.86□□□□□ -0.99
SCARNA20.1-201ENST00000516009 PLEKHA8P1O95397 391 aa8.86□□□□□ -0.99
SCARNA20.1-201ENST00000516009 TTLL1O95922 423 aa8.86□□□□□ -0.99
SCARNA20.1-201ENST00000516009 NOVP48745 357 aa8.86□□□□□ -0.99
SCARNA20.1-201ENST00000516009 KRT85P78386 507 aa8.86□□□□□ -0.99
SCARNA20.1-201ENST00000516009 DNM1Q05193 864 aaKnown RBP8.86□□□□□ -0.99
SCARNA20.1-201ENST00000516009 NBPF9Q3BBW0 867 aa8.86□□□□□ -0.99
SCARNA20.1-201ENST00000516009 CERKLQ49MI3 558 aaPredicted RBP8.86□□□□□ -0.99
SCARNA20.1-201ENST00000516009 RBM26Q5T8P6 1007 aaKnown RBP8.86□□□□□ -0.99
SCARNA20.1-201ENST00000516009 TATDN1Q6P1N9 297 aa8.86□□□□□ -0.99
SCARNA20.1-201ENST00000516009 NBPF11Q86T75 865 aa8.86□□□□□ -0.99
SCARNA20.1-201ENST00000516009 MICALL2Q8IY33 904 aa8.86□□□□□ -0.99
SCARNA20.1-201ENST00000516009 CMTR1Q8N1G2 835 aaKnown RBP8.86□□□□□ -0.99
SCARNA20.1-201ENST00000516009 DNAJC18Q9H819 358 aa8.86□□□□□ -0.99
SCARNA20.1-201ENST00000516009 LMBRD1Q9NUN5 540 aa8.86□□□□□ -0.99
SCARNA20.1-201ENST00000516009 MTMR4Q9NYA4 1195 aa8.86□□□□□ -0.99
SCARNA20.1-201ENST00000516009 HERC5Q9UII4 1024 aaKnown RBP8.86□□□□□ -0.99
SCARNA20.1-201ENST00000516009 CNPY2Q9Y2B0 182 aa8.86□□□□□ -0.99
SCARNA20.1-201ENST00000516009 ATAD5Q96QE3 1844 aa8.86□□□□□ -0.99
SCARNA20.1-201ENST00000516009 CNTNAP5Q8WYK1 1306 aa8.85□□□□□ -0.99
SCARNA20.1-201ENST00000516009 H7C1D1 291 aa8.85□□□□□ -0.99
SCARNA20.1-201ENST00000516009 FUT2Q10981 343 aa8.85□□□□□ -0.99
SCARNA20.1-201ENST00000516009 TNFAIP1Q13829 316 aa8.85□□□□□ -0.99
SCARNA20.1-201ENST00000516009 TBC1D10BQ4KMP7 808 aaPredicted RBP8.85□□□□□ -0.99
SCARNA20.1-201ENST00000516009 KRT40Q6A162 431 aa8.85□□□□□ -0.99
SCARNA20.1-201ENST00000516009 OTUD7BQ6GQQ9 843 aa8.85□□□□□ -0.99
SCARNA20.1-201ENST00000516009 TMEM179Q6ZVK1 233 aa8.85□□□□□ -0.99
SCARNA20.1-201ENST00000516009 GPC2Q8N158 579 aa8.85□□□□□ -0.99
SCARNA20.1-201ENST00000516009 TMEM87AQ8NBN3 555 aa8.85□□□□□ -0.99
SCARNA20.1-201ENST00000516009 AIFM3Q96NN9 605 aa8.85□□□□□ -0.99
SCARNA20.1-201ENST00000516009 LZTS2Q9BRK4 669 aa8.85□□□□□ -0.99
SCARNA20.1-201ENST00000516009 RBM27Q9P2N5 1060 aaKnown RBP8.85□□□□□ -0.99
SCARNA20.1-201ENST00000516009 MTMR7Q9Y216 660 aa8.85□□□□□ -0.99
SCARNA20.1-201ENST00000516009 PALM3A6NDB9 673 aaPredicted RBP8.84□□□□□ -0.99
SCARNA20.1-201ENST00000516009 FIBPO43427 364 aa8.84□□□□□ -0.99
SCARNA20.1-201ENST00000516009 PARP1P09874 1014 aaKnown RBP8.84□□□□□ -0.99
SCARNA20.1-201ENST00000516009 SLURP2P0DP57 97 aa8.84□□□□□ -0.99
SCARNA20.1-201ENST00000516009 YBX3P16989 372 aaKnown RBP eCLIP8.84□□□□□ -0.99
SCARNA20.1-201ENST00000516009 XBP1P17861 261 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms