RNA–Protein interactions for RNA: ENST00000515737.5

SH3BP2-228, Transcript of SH3 domain binding protein 2, humanhuman

TSL 2

Gene SH3BP2, Length 2,579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-228ENST00000515737 GOLGA6L4A6NEF3 574 aa19.59■□□□□ 0.73
SH3BP2-228ENST00000515737 ZNF445P59923 1031 aa19.59■□□□□ 0.73
SH3BP2-228ENST00000515737 TMTC3Q6ZXV5 915 aa19.59■□□□□ 0.73
SH3BP2-228ENST00000515737 SERPINB13Q9UIV8 391 aa19.59■□□□□ 0.73
SH3BP2-228ENST00000515737 PSME4Q14997 1843 aa19.58■□□□□ 0.73
SH3BP2-228ENST00000515737 MYSM1Q5VVJ2 828 aa19.58■□□□□ 0.72
SH3BP2-228ENST00000515737 ZFPM1Q8IX07 1006 aa19.58■□□□□ 0.72
SH3BP2-228ENST00000515737 VPS33BQ9H267 617 aa19.58■□□□□ 0.72
SH3BP2-228ENST00000515737 RCOR1Q9UKL0 485 aa19.58■□□□□ 0.72
SH3BP2-228ENST00000515737 V9GY48 417 aaPredicted RBP19.58■□□□□ 0.72
SH3BP2-228ENST00000515737 SYCE3A1L190 88 aa19.57■□□□□ 0.72
SH3BP2-228ENST00000515737 TCP10Q12799 353 aa19.57■□□□□ 0.72
SH3BP2-228ENST00000515737 GNL2Q13823 731 aaKnown RBP19.57■□□□□ 0.72
SH3BP2-228ENST00000515737 RSBN1LQ6PCB5 846 aaPredicted RBP19.57■□□□□ 0.72
SH3BP2-228ENST00000515737 TMEM47Q9BQJ4 181 aa19.57■□□□□ 0.72
SH3BP2-228ENST00000515737 MYH8P13535 1937 aa19.57■□□□□ 0.72
SH3BP2-228ENST00000515737 COL4A5P29400 1685 aa19.57■□□□□ 0.72
SH3BP2-228ENST00000515737 hCG_1642624A0A1W2PR95 340 aa19.57■□□□□ 0.72
SH3BP2-228ENST00000515737 PSDA5PKW4 1024 aaPredicted RBP19.57■□□□□ 0.72
SH3BP2-228ENST00000515737 PSMD14O00487 310 aa19.57■□□□□ 0.72
SH3BP2-228ENST00000515737 PRPF3O43395 683 aaKnown RBP19.57■□□□□ 0.72
SH3BP2-228ENST00000515737 HLA-DOAP06340 250 aa19.57■□□□□ 0.72
SH3BP2-228ENST00000515737 KIF5BP33176 963 aa19.57■□□□□ 0.72
SH3BP2-228ENST00000515737 CFAP100Q494V2 611 aa19.57■□□□□ 0.72
SH3BP2-228ENST00000515737 SRBD1Q8N5C6 995 aaKnown RBP19.57■□□□□ 0.72
SH3BP2-228ENST00000515737 PGBD1Q96JS3 809 aa19.57■□□□□ 0.72
SH3BP2-228ENST00000515737 ISY1Q9ULR0 285 aaKnown RBP19.57■□□□□ 0.72
SH3BP2-228ENST00000515737 VIL1P09327 827 aaKnown RBP19.56■□□□□ 0.72
SH3BP2-228ENST00000515737 IDI2Q9BXS1 227 aa19.56■□□□□ 0.72
SH3BP2-228ENST00000515737 KCNJ14Q9UNX9 436 aa19.56■□□□□ 0.72
SH3BP2-228ENST00000515737 MYO3BQ8WXR4 1341 aa19.56■□□□□ 0.72
SH3BP2-228ENST00000515737 PKN1Q16512 942 aa19.56■□□□□ 0.72
SH3BP2-228ENST00000515737 L1TD1Q5T7N2 865 aaKnown RBP19.56■□□□□ 0.72
SH3BP2-228ENST00000515737 CEP95Q96GE4 821 aa19.56■□□□□ 0.72
SH3BP2-228ENST00000515737 SGIP1Q9BQI5 828 aa19.56■□□□□ 0.72
SH3BP2-228ENST00000515737 TDRD3Q9H7E2 651 aaKnown RBP19.56■□□□□ 0.72
SH3BP2-228ENST00000515737 FAM198AQ9UFP1 575 aa19.56■□□□□ 0.72
SH3BP2-228ENST00000515737 U2AF2P26368 475 aaKnown RBP eCLIP19.55■□□□□ 0.724e-7■■■■■ 30.7
SH3BP2-228ENST00000515737 NIM1KQ8IY84 436 aa19.55■□□□□ 0.72
SH3BP2-228ENST00000515737 PRMT6Q96LA8 375 aaPredicted RBP19.55■□□□□ 0.72
SH3BP2-228ENST00000515737 SWAP70Q9UH65 585 aa19.55■□□□□ 0.72
SH3BP2-228ENST00000515737 ZNRF3Q9ULT6 936 aa19.55■□□□□ 0.72
SH3BP2-228ENST00000515737 MTMR7Q9Y216 660 aa19.55■□□□□ 0.72
SH3BP2-228ENST00000515737 BRCA1P38398 1863 aaKnown RBP19.55■□□□□ 0.72
SH3BP2-228ENST00000515737 MMP1P03956 469 aa19.55■□□□□ 0.72
SH3BP2-228ENST00000515737 SAFBQ15424 915 aaKnown RBP eCLIP19.55■□□□□ 0.72
SH3BP2-228ENST00000515737 MAP3K14Q99558 947 aa19.55■□□□□ 0.72
SH3BP2-228ENST00000515737 RTEL1Q9NZ71 1219 aa19.55■□□□□ 0.72
SH3BP2-228ENST00000515737 CNTNAP5Q8WYK1 1306 aa19.54■□□□□ 0.72
SH3BP2-228ENST00000515737 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.54■□□□□ 0.72
SH3BP2-228ENST00000515737 ZBTB12Q9Y330 459 aaPredicted RBP19.54■□□□□ 0.72
SH3BP2-228ENST00000515737 BTBD18B2RXH4 712 aa19.54■□□□□ 0.72
SH3BP2-228ENST00000515737 CCDC183Q5T5S1 534 aa19.54■□□□□ 0.72
SH3BP2-228ENST00000515737 STAG2Q8N3U4 1231 aa19.54■□□□□ 0.72
SH3BP2-228ENST00000515737 GMLQ99445 158 aa19.54■□□□□ 0.72
SH3BP2-228ENST00000515737 TAOK3Q9H2K8 898 aa19.54■□□□□ 0.72
SH3BP2-228ENST00000515737 DHX36Q9H2U1 1008 aaKnown RBP19.54■□□□□ 0.72
SH3BP2-228ENST00000515737 CD2APQ9Y5K6 639 aa19.54■□□□□ 0.72
SH3BP2-228ENST00000515737 CLIC4Q9Y696 253 aa19.54■□□□□ 0.72
SH3BP2-228ENST00000515737 AKR1B1P15121 316 aa19.53■□□□□ 0.72
SH3BP2-228ENST00000515737 LIG1P18858 919 aa19.53■□□□□ 0.72
SH3BP2-228ENST00000515737 ZSCAN29Q8IWY8 852 aaPredicted RBP19.53■□□□□ 0.72
SH3BP2-228ENST00000515737 DIS3L2Q8IYB7 885 aaKnown RBP19.53■□□□□ 0.72
SH3BP2-228ENST00000515737 DDTLA6NHG4 134 aaPredicted RBP19.53■□□□□ 0.72
SH3BP2-228ENST00000515737 SLURP2P0DP57 97 aa19.53■□□□□ 0.72
SH3BP2-228ENST00000515737 XBP1P17861 261 aa19.53■□□□□ 0.72
SH3BP2-228ENST00000515737 SHMT1P34896 483 aa19.53■□□□□ 0.72
SH3BP2-228ENST00000515737 GRM4Q14833 912 aa19.53■□□□□ 0.72
SH3BP2-228ENST00000515737 BICD2Q8TD16 824 aa19.53■□□□□ 0.72
SH3BP2-228ENST00000515737 GRPEL1Q9HAV7 217 aa19.53■□□□□ 0.72
SH3BP2-228ENST00000515737 POLR3EQ9NVU0 708 aa19.53■□□□□ 0.72
SH3BP2-228ENST00000515737 VPS54Q9P1Q0 977 aa19.53■□□□□ 0.72
SH3BP2-228ENST00000515737 NPM3O75607 178 aaKnown RBP19.52■□□□□ 0.72
SH3BP2-228ENST00000515737 LRSAM1Q6UWE0 723 aa19.52■□□□□ 0.72
SH3BP2-228ENST00000515737 OGFOD1Q8N543 542 aa19.52■□□□□ 0.72
SH3BP2-228ENST00000515737 LINC00301Q8NCQ3 95 aa19.52■□□□□ 0.72
SH3BP2-228ENST00000515737 EHD4Q9H223 541 aa19.52■□□□□ 0.72
SH3BP2-228ENST00000515737 MAD2L2Q9UI95 211 aa19.52■□□□□ 0.72
SH3BP2-228ENST00000515737 BCS1LQ9Y276 419 aa19.52■□□□□ 0.72
SH3BP2-228ENST00000515737 FER1L6Q2WGJ9 1857 aa19.52■□□□□ 0.72
SH3BP2-228ENST00000515737 UTRNP46939 3433 aa19.52■□□□□ 0.72
SH3BP2-228ENST00000515737 TOP1P11387 765 aaKnown RBP19.52■□□□□ 0.72
SH3BP2-228ENST00000515737 ME1P48163 572 aa19.52■□□□□ 0.72
SH3BP2-228ENST00000515737 MRE11P49959 708 aa19.52■□□□□ 0.72
SH3BP2-228ENST00000515737 PIBF1Q8WXW3 757 aa19.52■□□□□ 0.72
SH3BP2-228ENST00000515737 PI4KBQ9UBF8 816 aa19.52■□□□□ 0.72
SH3BP2-228ENST00000515737 HDAC9Q9UKV0 1011 aa19.52■□□□□ 0.72
SH3BP2-228ENST00000515737 XRCC6P12956 609 aaKnown RBP eCLIP19.51■□□□□ 0.71
SH3BP2-228ENST00000515737 PTGER2P43116 358 aa19.51■□□□□ 0.71
SH3BP2-228ENST00000515737 NOVP48745 357 aa19.51■□□□□ 0.71
SH3BP2-228ENST00000515737 GNAQP50148 359 aa19.51■□□□□ 0.71
SH3BP2-228ENST00000515737 STK38Q15208 465 aa19.51■□□□□ 0.71
SH3BP2-228ENST00000515737 SH3BP5LQ7L8J4 393 aa19.51■□□□□ 0.71
SH3BP2-228ENST00000515737 NOSTRINQ8IVI9 506 aa19.51■□□□□ 0.71
SH3BP2-228ENST00000515737 SHISA4Q96DD7 197 aa19.51■□□□□ 0.71
SH3BP2-228ENST00000515737 MTMR4Q9NYA4 1195 aa19.51■□□□□ 0.71
SH3BP2-228ENST00000515737 CXCL9Q07325 125 aa19.51■□□□□ 0.71
SH3BP2-228ENST00000515737 ANO1Q5XXA6 986 aa19.51■□□□□ 0.71
SH3BP2-228ENST00000515737 JDP2Q8WYK2 163 aa19.51■□□□□ 0.71
SH3BP2-228ENST00000515737 FOXP1Q9H334 677 aaPredicted RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms