RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 WDHD1O75717 1129 aaPredicted RBP17.86■□□□□ 0.45
THUMPD3-210ENST00000515662 ADALQ6DHV7 355 aa17.86■□□□□ 0.45
THUMPD3-210ENST00000515662 RBM43Q6ZSC3 357 aaKnown RBP17.86■□□□□ 0.45
THUMPD3-210ENST00000515662 SRBD1Q8N5C6 995 aaKnown RBP17.86■□□□□ 0.45
THUMPD3-210ENST00000515662 FOXP1Q9H334 677 aaPredicted RBP17.86■□□□□ 0.45
THUMPD3-210ENST00000515662 CNTNAP5Q8WYK1 1306 aa17.85■□□□□ 0.45
THUMPD3-210ENST00000515662 FKBP1AP62942 108 aaKnown RBP17.85■□□□□ 0.45
THUMPD3-210ENST00000515662 STRIP1Q5VSL9 837 aa17.85■□□□□ 0.45
THUMPD3-210ENST00000515662 CC2D2BQ6DHV5 1058 aa17.85■□□□□ 0.45
THUMPD3-210ENST00000515662 TEKT1Q969V4 418 aa17.85■□□□□ 0.45
THUMPD3-210ENST00000515662 SHISA4Q96DD7 197 aa17.85■□□□□ 0.45
THUMPD3-210ENST00000515662 MAP3K14Q99558 947 aa17.85■□□□□ 0.45
THUMPD3-210ENST00000515662 USP40Q9NVE5 1235 aa17.85■□□□□ 0.45
THUMPD3-210ENST00000515662 ADAMTSL1Q8N6G6 1762 aa17.85■□□□□ 0.45
THUMPD3-210ENST00000515662 CCDC173Q0VFZ6 552 aa17.84■□□□□ 0.45
THUMPD3-210ENST00000515662 SLC39A14Q15043 492 aa17.84■□□□□ 0.45
THUMPD3-210ENST00000515662 CCDC73Q6ZRK6 1079 aa17.84■□□□□ 0.45
THUMPD3-210ENST00000515662 PNMA1Q8ND90 353 aa17.84■□□□□ 0.45
THUMPD3-210ENST00000515662 ENGASEQ8NFI3 743 aa17.84■□□□□ 0.45
THUMPD3-210ENST00000515662 PPP1R9BQ96SB3 815 aa17.84■□□□□ 0.45
THUMPD3-210ENST00000515662 hCG_1642624A0A1W2PR95 340 aa17.84■□□□□ 0.45
THUMPD3-210ENST00000515662 KIF5BP33176 963 aa17.84■□□□□ 0.45
THUMPD3-210ENST00000515662 PICALMQ13492 652 aa17.84■□□□□ 0.45
THUMPD3-210ENST00000515662 SNW1Q13573 536 aaKnown RBP17.84■□□□□ 0.45
THUMPD3-210ENST00000515662 DACT2Q5SW24 774 aa17.84■□□□□ 0.45
THUMPD3-210ENST00000515662 APOBEC3HQ6NTF7 200 aaKnown RBP17.84■□□□□ 0.45
THUMPD3-210ENST00000515662 FSIP1Q8NA03 581 aa17.84■□□□□ 0.45
THUMPD3-210ENST00000515662 DDX4Q9NQI0 724 aaKnown RBP17.84■□□□□ 0.45
THUMPD3-210ENST00000515662 MYH6P13533 1939 aa17.84■□□□□ 0.45
THUMPD3-210ENST00000515662 FAM160A1Q05DH4 1040 aa17.83■□□□□ 0.45
THUMPD3-210ENST00000515662 PTPAQ15257 358 aa17.83■□□□□ 0.45
THUMPD3-210ENST00000515662 CDC42EP5Q6NZY7 148 aa17.83■□□□□ 0.45
THUMPD3-210ENST00000515662 NEDD1Q8NHV4 660 aa17.83■□□□□ 0.45
THUMPD3-210ENST00000515662 MRPS27Q92552 414 aaKnown RBP17.83■□□□□ 0.45
THUMPD3-210ENST00000515662 CCDC192P0DO97 292 aa17.83■□□□□ 0.44
THUMPD3-210ENST00000515662 XBP1P17861 261 aa17.83■□□□□ 0.44
THUMPD3-210ENST00000515662 CRKP46108 304 aa17.83■□□□□ 0.44
THUMPD3-210ENST00000515662 KIAA2012Q0VF49 1180 aa17.83■□□□□ 0.44
THUMPD3-210ENST00000515662 AOC3Q16853 763 aa17.83■□□□□ 0.44
THUMPD3-210ENST00000515662 CKAP2LQ8IYA6 745 aa17.83■□□□□ 0.44
THUMPD3-210ENST00000515662 VPS54Q9P1Q0 977 aa17.83■□□□□ 0.44
THUMPD3-210ENST00000515662 ZNF646O15015 1829 aaPredicted RBP17.83■□□□□ 0.44
THUMPD3-210ENST00000515662 SCN9AQ15858 1988 aa17.82■□□□□ 0.44
THUMPD3-210ENST00000515662 AXDND1Q5T1B0 1012 aaPredicted RBP17.82■□□□□ 0.44
THUMPD3-210ENST00000515662 SUPT20HQ8NEM7 779 aa17.82■□□□□ 0.44
THUMPD3-210ENST00000515662 ZDHHC15Q96MV8 337 aa17.82■□□□□ 0.44
THUMPD3-210ENST00000515662 TMEM47Q9BQJ4 181 aa17.82■□□□□ 0.44
THUMPD3-210ENST00000515662 PHF20Q9BVI0 1012 aa17.82■□□□□ 0.44
THUMPD3-210ENST00000515662 MRIQ9BWK5 157 aa17.82■□□□□ 0.44
THUMPD3-210ENST00000515662 C21orf2O43822 256 aa17.82■□□□□ 0.44
THUMPD3-210ENST00000515662 NR5A1Q13285 461 aa17.82■□□□□ 0.44
THUMPD3-210ENST00000515662 GRM4Q14833 912 aa17.82■□□□□ 0.44
THUMPD3-210ENST00000515662 OXER1Q8TDS5 423 aa17.82■□□□□ 0.44
THUMPD3-210ENST00000515662 TOB1P50616 345 aaPredicted RBP17.81■□□□□ 0.44
THUMPD3-210ENST00000515662 GABPAQ06546 454 aa17.81■□□□□ 0.44
THUMPD3-210ENST00000515662 KIAA0825Q8IV33 1275 aa17.81■□□□□ 0.44
THUMPD3-210ENST00000515662 SLC16A10Q8TF71 515 aa17.81■□□□□ 0.44
THUMPD3-210ENST00000515662 STX8Q9UNK0 236 aa17.81■□□□□ 0.44
THUMPD3-210ENST00000515662 PPP6R2O75170 966 aa17.81■□□□□ 0.44
THUMPD3-210ENST00000515662 CLCN1P35523 988 aa17.81■□□□□ 0.44
THUMPD3-210ENST00000515662 HDLBPQ00341 1268 aaKnown RBP17.81■□□□□ 0.44
THUMPD3-210ENST00000515662 TYRO3Q06418 890 aa17.81■□□□□ 0.44
THUMPD3-210ENST00000515662 UVSSAQ2YD98 709 aa17.81■□□□□ 0.44
THUMPD3-210ENST00000515662 FMR1NBQ8N0W7 255 aaPredicted RBP17.81■□□□□ 0.44
THUMPD3-210ENST00000515662 KINO60870 393 aaKnown RBP17.8■□□□□ 0.44
THUMPD3-210ENST00000515662 TTLL6Q8N841 843 aa17.8■□□□□ 0.44
THUMPD3-210ENST00000515662 OSBPL5Q9H0X9 879 aaPredicted RBP17.8■□□□□ 0.44
THUMPD3-210ENST00000515662 MAD2L2Q9UI95 211 aa17.8■□□□□ 0.44
THUMPD3-210ENST00000515662 A0A1B0GVL5 298 aa17.8■□□□□ 0.44
THUMPD3-210ENST00000515662 CTAGE5O15320 804 aa17.8■□□□□ 0.44
THUMPD3-210ENST00000515662 MARCKSP29966 332 aaPredicted RBP17.8■□□□□ 0.44
THUMPD3-210ENST00000515662 NDUFA8P51970 172 aa17.8■□□□□ 0.44
THUMPD3-210ENST00000515662 RILPL1Q5EBL4 403 aa17.8■□□□□ 0.44
THUMPD3-210ENST00000515662 STAG2Q8N3U4 1231 aa17.8■□□□□ 0.44
THUMPD3-210ENST00000515662 JMYQ8N9B5 988 aa17.8■□□□□ 0.44
THUMPD3-210ENST00000515662 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.8■□□□□ 0.44
THUMPD3-210ENST00000515662 SCG2P13521 617 aa17.79■□□□□ 0.44
THUMPD3-210ENST00000515662 CMA1P23946 247 aa17.79■□□□□ 0.44
THUMPD3-210ENST00000515662 KRT2P35908 639 aa17.79■□□□□ 0.44
THUMPD3-210ENST00000515662 NOVP48745 357 aa17.79■□□□□ 0.44
THUMPD3-210ENST00000515662 GNAQP50148 359 aa17.79■□□□□ 0.44
THUMPD3-210ENST00000515662 PFKFB3Q16875 520 aaPredicted RBP17.79■□□□□ 0.44
THUMPD3-210ENST00000515662 GRIPAP1Q4V328 841 aa17.79■□□□□ 0.44
THUMPD3-210ENST00000515662 PDLIM2Q96JY6 352 aa17.79■□□□□ 0.44
THUMPD3-210ENST00000515662 MRVI1Q9Y6F6 885 aa17.79■□□□□ 0.44
THUMPD3-210ENST00000515662 PLIN4Q96Q06 1357 aa17.79■□□□□ 0.44
THUMPD3-210ENST00000515662 ESPNB1AK53 854 aa17.79■□□□□ 0.44
THUMPD3-210ENST00000515662 CEP95Q96GE4 821 aa17.79■□□□□ 0.44
THUMPD3-210ENST00000515662 NAP1L5Q96NT1 182 aaPredicted RBP17.79■□□□□ 0.44
THUMPD3-210ENST00000515662 PCDHAC2Q9Y5I4 1007 aa17.79■□□□□ 0.44
THUMPD3-210ENST00000515662 PPIP5K2O43314 1243 aa17.78■□□□□ 0.44
THUMPD3-210ENST00000515662 KCNA3P22001 575 aa17.78■□□□□ 0.44
THUMPD3-210ENST00000515662 NFIAQ12857 509 aa17.78■□□□□ 0.44
THUMPD3-210ENST00000515662 NPY5RQ15761 445 aa17.78■□□□□ 0.44
THUMPD3-210ENST00000515662 SERPINB13Q9UIV8 391 aa17.78■□□□□ 0.44
THUMPD3-210ENST00000515662 PALM3A6NDB9 673 aaPredicted RBP17.77■□□□□ 0.44
THUMPD3-210ENST00000515662 TOP1P11387 765 aaKnown RBP17.77■□□□□ 0.44
THUMPD3-210ENST00000515662 DPEP1P16444 411 aa17.77■□□□□ 0.44
THUMPD3-210ENST00000515662 CCDC93Q567U6 631 aa17.77■□□□□ 0.44
THUMPD3-210ENST00000515662 SWAP70Q9UH65 585 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms