RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 NBPF3Q9H094 633 aa14.1□□□□□ -0.15
SNF8-215ENST00000515572 ARHGEF10LQ9HCE6 1279 aa14.1□□□□□ -0.15
SNF8-215ENST00000515572 RBM8AQ9Y5S9 174 aaKnown RBP14.1□□□□□ -0.15
SNF8-215ENST00000515572 TSPY2A6NKD2 308 aa14.09□□□□□ -0.15
SNF8-215ENST00000515572 EPB41L2O43491 1005 aaKnown RBP14.09□□□□□ -0.15
SNF8-215ENST00000515572 CA12O43570 354 aa14.09□□□□□ -0.15
SNF8-215ENST00000515572 ALDH1A1P00352 501 aa14.09□□□□□ -0.15
SNF8-215ENST00000515572 CYP21A2P08686 494 aa14.09□□□□□ -0.15
SNF8-215ENST00000515572 BACE1P56817 501 aa14.09□□□□□ -0.15
SNF8-215ENST00000515572 TFAP4Q01664 338 aa14.09□□□□□ -0.15
SNF8-215ENST00000515572 ICA1Q05084 483 aa14.09□□□□□ -0.15
SNF8-215ENST00000515572 PPP4R3BQ5MIZ7 849 aa14.09□□□□□ -0.15
SNF8-215ENST00000515572 IFNL1Q8IU54 200 aa14.09□□□□□ -0.15
SNF8-215ENST00000515572 TBC1D10CQ8IV04 446 aa14.09□□□□□ -0.15
SNF8-215ENST00000515572 ESR2Q92731 530 aa14.09□□□□□ -0.15
SNF8-215ENST00000515572 FEZ1Q99689 392 aa14.09□□□□□ -0.15
SNF8-215ENST00000515572 BEGAINQ9BUH8 593 aa14.09□□□□□ -0.15
SNF8-215ENST00000515572 SH2D4AQ9H788 454 aa14.09□□□□□ -0.15
SNF8-215ENST00000515572 CNNM2Q9H8M5 875 aa14.09□□□□□ -0.15
SNF8-215ENST00000515572 ZCCHC17Q9NP64 241 aaKnown RBP14.09□□□□□ -0.15
SNF8-215ENST00000515572 TOMM22Q9NS69 142 aa14.09□□□□□ -0.15
SNF8-215ENST00000515572 RANBP6O60518 1105 aaKnown RBP14.08□□□□□ -0.16
SNF8-215ENST00000515572 MTMR2Q13614 643 aa14.08□□□□□ -0.16
SNF8-215ENST00000515572 SH3D19Q5HYK7 790 aa14.08□□□□□ -0.16
SNF8-215ENST00000515572 RNF20Q5VTR2 975 aa14.08□□□□□ -0.16
SNF8-215ENST00000515572 PROCA1Q8NCQ7 364 aaPredicted RBP14.08□□□□□ -0.16
SNF8-215ENST00000515572 BRI3BPQ8WY22 251 aa14.08□□□□□ -0.16
SNF8-215ENST00000515572 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.08□□□□□ -0.16
SNF8-215ENST00000515572 KRT23Q9C075 422 aa14.08□□□□□ -0.16
SNF8-215ENST00000515572 KIAA1683Q9H0B3 1180 aa14.08□□□□□ -0.16
SNF8-215ENST00000515572 WBP1LQ9NX94 342 aa14.08□□□□□ -0.16
SNF8-215ENST00000515572 SAGE1Q9NXZ1 904 aa14.08□□□□□ -0.16
SNF8-215ENST00000515572 TMOD4Q9NZQ9 345 aa14.08□□□□□ -0.16
SNF8-215ENST00000515572 SYNPO2Q9UMS6 1093 aa14.08□□□□□ -0.16
SNF8-215ENST00000515572 IGKV6D-41A0A0C4DH26 115 aa14.07□□□□□ -0.16
SNF8-215ENST00000515572 USP14P54578 494 aa14.07□□□□□ -0.16
SNF8-215ENST00000515572 TRDNQ13061 729 aa14.07□□□□□ -0.16
SNF8-215ENST00000515572 NECTIN1Q15223 517 aa14.07□□□□□ -0.16
SNF8-215ENST00000515572 RRP12Q5JTH9 1297 aaKnown RBP14.07□□□□□ -0.16
SNF8-215ENST00000515572 USP17L2Q6R6M4 530 aa14.07□□□□□ -0.16
SNF8-215ENST00000515572 ANKRD23Q86SG2 305 aa14.07□□□□□ -0.16
SNF8-215ENST00000515572 INCENPQ9NQS7 918 aa14.07□□□□□ -0.16
SNF8-215ENST00000515572 NYAP2Q9P242 653 aa14.07□□□□□ -0.16
SNF8-215ENST00000515572 SLC45A1Q9Y2W3 748 aa14.07□□□□□ -0.16
SNF8-215ENST00000515572 TACC3Q9Y6A5 838 aa14.07□□□□□ -0.16
SNF8-215ENST00000515572 TTLL1O95922 423 aa14.06□□□□□ -0.16
SNF8-215ENST00000515572 EEF2P13639 858 aaKnown RBP14.06□□□□□ -0.16
SNF8-215ENST00000515572 HMGCS2P54868 508 aa14.06□□□□□ -0.16
SNF8-215ENST00000515572 MOGSQ13724 837 aa14.06□□□□□ -0.16
SNF8-215ENST00000515572 FAM47AQ5JRC9 791 aa14.06□□□□□ -0.16
SNF8-215ENST00000515572 GADL1Q6ZQY3 521 aa14.06□□□□□ -0.16
SNF8-215ENST00000515572 ACER1Q8TDN7 264 aa14.06□□□□□ -0.16
SNF8-215ENST00000515572 CEP95Q96GE4 821 aa14.06□□□□□ -0.16
SNF8-215ENST00000515572 C12orf42Q96LP6 360 aa14.06□□□□□ -0.16
SNF8-215ENST00000515572 PTPN18Q99952 460 aa14.06□□□□□ -0.16
SNF8-215ENST00000515572 TCP11L1Q9NUJ3 509 aa14.06□□□□□ -0.16
SNF8-215ENST00000515572 MTMR4Q9NYA4 1195 aa14.06□□□□□ -0.16
SNF8-215ENST00000515572 AGTPBP1Q9UPW5 1226 aa14.06□□□□□ -0.16
SNF8-215ENST00000515572 TMX2Q9Y320 296 aa14.06□□□□□ -0.16
SNF8-215ENST00000515572 CEP350Q5VT06 3117 aa14.06□□□□□ -0.16
SNF8-215ENST00000515572 NEDD4P46934 1319 aa14.06□□□□□ -0.16
SNF8-215ENST00000515572 A0A1W2PRG0 241 aa14.05□□□□□ -0.16
SNF8-215ENST00000515572 BTBD19C9JJ37 291 aa14.05□□□□□ -0.16
SNF8-215ENST00000515572 IGF2BP3O00425 579 aaKnown RBP eCLIP14.05□□□□□ -0.16
SNF8-215ENST00000515572 SLC27A2O14975 620 aa14.05□□□□□ -0.16
SNF8-215ENST00000515572 PABPC4Q13310 644 aaKnown RBP eCLIP14.05□□□□□ -0.164e-8■■□□□ 14.5
SNF8-215ENST00000515572 CCDC178Q5BJE1 867 aa14.05□□□□□ -0.16
SNF8-215ENST00000515572 CREB3L3Q68CJ9 461 aa14.05□□□□□ -0.16
SNF8-215ENST00000515572 RALYLQ86SE5 291 aaKnown RBP14.05□□□□□ -0.16
SNF8-215ENST00000515572 IQCA1Q86XH1 822 aa14.05□□□□□ -0.16
SNF8-215ENST00000515572 SIAH1Q8IUQ4 282 aa14.05□□□□□ -0.16
SNF8-215ENST00000515572 LPAR1Q92633 364 aa14.05□□□□□ -0.16
SNF8-215ENST00000515572 CFHR5Q9BXR6 569 aa14.05□□□□□ -0.16
SNF8-215ENST00000515572 B4E1Z4 1266 aa14.04□□□□□ -0.16
SNF8-215ENST00000515572 E7EWF7 191 aa14.04□□□□□ -0.16
SNF8-215ENST00000515572 PDHXO00330 501 aa14.04□□□□□ -0.16
SNF8-215ENST00000515572 KDM4AO75164 1064 aa14.04□□□□□ -0.16
SNF8-215ENST00000515572 ZKSCAN1P17029 563 aaPredicted RBP14.04□□□□□ -0.16
SNF8-215ENST00000515572 NOVP48745 357 aa14.04□□□□□ -0.16
SNF8-215ENST00000515572 ATP2B2Q01814 1243 aa14.04□□□□□ -0.16
SNF8-215ENST00000515572 GPAT2Q6NUI2 795 aa14.04□□□□□ -0.16
SNF8-215ENST00000515572 CLEC10AQ8IUN9 316 aa14.04□□□□□ -0.16
SNF8-215ENST00000515572 FAM43AQ8N2R8 423 aa14.04□□□□□ -0.16
SNF8-215ENST00000515572 NCOA7Q8NI08 942 aa14.04□□□□□ -0.16
SNF8-215ENST00000515572 MKL1Q969V6 931 aa14.04□□□□□ -0.16
SNF8-215ENST00000515572 TTC14Q96N46 770 aa14.04□□□□□ -0.16
SNF8-215ENST00000515572 GOPCQ9HD26 462 aa14.04□□□□□ -0.16
SNF8-215ENST00000515572 IL17RBQ9NRM6 502 aa14.04□□□□□ -0.16
SNF8-215ENST00000515572 EMILIN3Q9NT22 766 aa14.04□□□□□ -0.16
SNF8-215ENST00000515572 RNF186Q9NXI6 227 aa14.04□□□□□ -0.16
SNF8-215ENST00000515572 CLIP2Q9UDT6 1046 aa14.04□□□□□ -0.16
SNF8-215ENST00000515572 PNMA3Q9UL41 463 aa14.04□□□□□ -0.16
SNF8-215ENST00000515572 HSPA4P34932 840 aa14.03□□□□□ -0.16
SNF8-215ENST00000515572 KRT32Q14532 448 aa14.03□□□□□ -0.16
SNF8-215ENST00000515572 ZYXQ15942 572 aaKnown RBP14.03□□□□□ -0.16
SNF8-215ENST00000515572 TSGA10IPQ3SY00 556 aa14.03□□□□□ -0.16
SNF8-215ENST00000515572 PARK7Q99497 189 aaKnown RBP14.03□□□□□ -0.16
SNF8-215ENST00000515572 VCPKMTQ9H867 229 aa14.03□□□□□ -0.16
SNF8-215ENST00000515572 ZSWIM5Q9P217 1185 aa14.03□□□□□ -0.16
SNF8-215ENST00000515572 STX8Q9UNK0 236 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms