RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 CYP7A1P22680 504 aa19.25■□□□□ 0.67
LMNA-223ENST00000515459 USP17L24Q0WX57 530 aa19.25■□□□□ 0.67
LMNA-223ENST00000515459 ZYXQ15942 572 aaKnown RBP19.25■□□□□ 0.67
LMNA-223ENST00000515459 TATDN1Q6P1N9 297 aa19.25■□□□□ 0.67
LMNA-223ENST00000515459 CERS3Q8IU89 383 aa19.25■□□□□ 0.67
LMNA-223ENST00000515459 EDC3Q96F86 508 aaKnown RBP19.25■□□□□ 0.67
LMNA-223ENST00000515459 PIH1D3Q9NQM4 214 aaKnown RBP19.25■□□□□ 0.67
LMNA-223ENST00000515459 SURF6O75683 361 aaKnown RBP19.24■□□□□ 0.67
LMNA-223ENST00000515459 BCAR3O75815 825 aa19.24■□□□□ 0.67
LMNA-223ENST00000515459 USP14P54578 494 aa19.24■□□□□ 0.67
LMNA-223ENST00000515459 MDM2Q00987 491 aaPredicted RBP19.24■□□□□ 0.67
LMNA-223ENST00000515459 MFSD14CQ5VZR4 134 aa19.24■□□□□ 0.67
LMNA-223ENST00000515459 SSH3Q8TE77 659 aa19.24■□□□□ 0.67
LMNA-223ENST00000515459 CNMDO75829 334 aa19.23■□□□□ 0.67
LMNA-223ENST00000515459 IDH1O75874 414 aaKnown RBP19.23■□□□□ 0.67
LMNA-223ENST00000515459 USP5P45974 858 aa19.23■□□□□ 0.67
LMNA-223ENST00000515459 ATP8B2P98198 1209 aa19.23■□□□□ 0.67
LMNA-223ENST00000515459 RAB3GAP1Q15042 981 aa19.23■□□□□ 0.67
LMNA-223ENST00000515459 WDR78Q5VTH9 848 aa19.23■□□□□ 0.67
LMNA-223ENST00000515459 CATSPERGQ6ZRH7 1159 aa19.23■□□□□ 0.67
LMNA-223ENST00000515459 EHD4Q9H223 541 aa19.23■□□□□ 0.67
LMNA-223ENST00000515459 SERPINB13Q9UIV8 391 aa19.23■□□□□ 0.67
LMNA-223ENST00000515459 NDUFB9Q9Y6M9 179 aa19.23■□□□□ 0.67
LMNA-223ENST00000515459 SLC15A5A6NIM6 579 aa19.22■□□□□ 0.67
LMNA-223ENST00000515459 MSCO60682 206 aa19.22■□□□□ 0.67
LMNA-223ENST00000515459 PTPREP23469 700 aa19.22■□□□□ 0.67
LMNA-223ENST00000515459 LBX2Q6XYB7 198 aa19.22■□□□□ 0.67
LMNA-223ENST00000515459 TMEM57Q8N5G2 664 aa19.22■□□□□ 0.67
LMNA-223ENST00000515459 MIGA1Q8NAN2 632 aa19.22■□□□□ 0.67
LMNA-223ENST00000515459 SENP6Q9GZR1 1112 aaPredicted RBP19.22■□□□□ 0.67
LMNA-223ENST00000515459 KIAA1683Q9H0B3 1180 aa19.22■□□□□ 0.67
LMNA-223ENST00000515459 FLRT1Q9NZU1 646 aa19.22■□□□□ 0.67
LMNA-223ENST00000515459 DBNLQ9UJU6 430 aaKnown RBP19.22■□□□□ 0.67
LMNA-223ENST00000515459 IVNS1ABPQ9Y6Y0 642 aa19.22■□□□□ 0.67
LMNA-223ENST00000515459 VCAM1P19320 739 aa19.21■□□□□ 0.67
LMNA-223ENST00000515459 ATP2B2Q01814 1243 aa19.21■□□□□ 0.67
LMNA-223ENST00000515459 ABCB5Q2M3G0 1257 aa19.21■□□□□ 0.67
LMNA-223ENST00000515459 CERKLQ49MI3 558 aaPredicted RBP19.21■□□□□ 0.67
LMNA-223ENST00000515459 TTC6Q86TZ1 520 aa19.21■□□□□ 0.67
LMNA-223ENST00000515459 LBHD1Q9BQE6 289 aaPredicted RBP19.21■□□□□ 0.67
LMNA-223ENST00000515459 DDX20Q9UHI6 824 aaKnown RBP19.21■□□□□ 0.67
LMNA-223ENST00000515459 HOXC6P09630 235 aa19.2■□□□□ 0.66
LMNA-223ENST00000515459 CNGA1P29973 690 aa19.2■□□□□ 0.66
LMNA-223ENST00000515459 ZKSCAN2Q63HK3 967 aa19.2■□□□□ 0.66
LMNA-223ENST00000515459 MAGEB6Q8N7X4 407 aa19.2■□□□□ 0.66
LMNA-223ENST00000515459 LPAR1Q92633 364 aa19.2■□□□□ 0.66
LMNA-223ENST00000515459 CCDC8Q9H0W5 538 aaPredicted RBP19.2■□□□□ 0.66
LMNA-223ENST00000515459 CABP5Q9NP86 173 aa19.2■□□□□ 0.66
LMNA-223ENST00000515459 TLR7Q9NYK1 1049 aaKnown RBP19.2■□□□□ 0.66
LMNA-223ENST00000515459 BTBD7Q9P203 1132 aa19.2■□□□□ 0.66
LMNA-223ENST00000515459 NOP58Q9Y2X3 529 aaKnown RBP19.2■□□□□ 0.66
LMNA-223ENST00000515459 GRB14Q14449 540 aa19.19■□□□□ 0.66
LMNA-223ENST00000515459 TMED8Q6PL24 325 aaPredicted RBP19.19■□□□□ 0.66
LMNA-223ENST00000515459 ACER1Q8TDN7 264 aa19.19■□□□□ 0.66
LMNA-223ENST00000515459 SPDYE16A6NNV3 312 aaPredicted RBP19.18■□□□□ 0.66
LMNA-223ENST00000515459 DNM1LO00429 736 aa19.18■□□□□ 0.66
LMNA-223ENST00000515459 CYP2C19P33261 490 aa19.18■□□□□ 0.66
LMNA-223ENST00000515459 MAP3K12Q12852 859 aa19.18■□□□□ 0.66
LMNA-223ENST00000515459 FAM109BQ6ICB4 259 aaPredicted RBP19.18■□□□□ 0.66
LMNA-223ENST00000515459 EAF2Q96CJ1 260 aaPredicted RBP19.18■□□□□ 0.66
LMNA-223ENST00000515459 RPAP3Q9H6T3 665 aaPredicted RBP19.18■□□□□ 0.66
LMNA-223ENST00000515459 C1orf115Q9H7X2 142 aa19.18■□□□□ 0.66
LMNA-223ENST00000515459 PRKAG2Q9UGJ0 569 aa19.18■□□□□ 0.66
LMNA-223ENST00000515459 POTEB2H3BUK9 544 aa19.17■□□□□ 0.66
LMNA-223ENST00000515459 ATN1P54259 1190 aaPredicted RBP19.17■□□□□ 0.66
LMNA-223ENST00000515459 NPLOC4Q8TAT6 608 aa19.17■□□□□ 0.66
LMNA-223ENST00000515459 ZNF236Q9UL36 1845 aa19.16■□□□□ 0.66
LMNA-223ENST00000515459 CUL9Q8IWT3 2517 aa19.16■□□□□ 0.66
LMNA-223ENST00000515459 NAV1Q8NEY1 1877 aa19.16■□□□□ 0.66
LMNA-223ENST00000515459 SHMT1P34896 483 aa19.16■□□□□ 0.66
LMNA-223ENST00000515459 PLCD1P51178 756 aa19.16■□□□□ 0.66
LMNA-223ENST00000515459 DPP9Q86TI2 863 aa19.16■□□□□ 0.66
LMNA-223ENST00000515459 ANTXR1Q9H6X2 564 aa19.16■□□□□ 0.66
LMNA-223ENST00000515459 LTBP2Q14767 1821 aa19.16■□□□□ 0.66
LMNA-223ENST00000515459 RLFQ13129 1914 aa19.15■□□□□ 0.66
LMNA-223ENST00000515459 A0A0C4DFX4 3053 aa19.15■□□□□ 0.66
LMNA-223ENST00000515459 CCER2I3L3R5 266 aa19.15■□□□□ 0.66
LMNA-223ENST00000515459 CYBAP13498 195 aa19.15■□□□□ 0.66
LMNA-223ENST00000515459 ARRDC4Q8NCT1 418 aa19.15■□□□□ 0.66
LMNA-223ENST00000515459 TRPV1Q8NER1 839 aa19.15■□□□□ 0.66
LMNA-223ENST00000515459 STRNO43815 780 aa19.14■□□□□ 0.65
LMNA-223ENST00000515459 IGHA2P01877 340 aa19.14■□□□□ 0.65
LMNA-223ENST00000515459 POLR3DP05423 398 aaPredicted RBP19.14■□□□□ 0.65
LMNA-223ENST00000515459 GUCY1A2P33402 732 aa19.14■□□□□ 0.65
LMNA-223ENST00000515459 RTP1P59025 263 aa19.14■□□□□ 0.65
LMNA-223ENST00000515459 COG2Q14746 738 aa19.14■□□□□ 0.65
LMNA-223ENST00000515459 SEPT2Q15019 361 aa19.14■□□□□ 0.65
LMNA-223ENST00000515459 OLFML2BQ68BL8 750 aa19.14■□□□□ 0.65
LMNA-223ENST00000515459 GUCD1Q96NT3 240 aa19.14■□□□□ 0.65
LMNA-223ENST00000515459 RIOK1Q9BRS2 568 aaKnown RBP19.14■□□□□ 0.65
LMNA-223ENST00000515459 HOXC10Q9NYD6 342 aa19.14■□□□□ 0.65
LMNA-223ENST00000515459 ADORA2AP29274 412 aa19.13■□□□□ 0.65
LMNA-223ENST00000515459 GABPAQ06546 454 aa19.13■□□□□ 0.65
LMNA-223ENST00000515459 GJC2Q5T442 439 aaPredicted RBP19.13■□□□□ 0.65
LMNA-223ENST00000515459 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.13■□□□□ 0.65
LMNA-223ENST00000515459 FTSJ3Q8IY81 847 aaKnown RBP19.13■□□□□ 0.65
LMNA-223ENST00000515459 MOV10L1Q9BXT6 1211 aaKnown RBP19.13■□□□□ 0.65
LMNA-223ENST00000515459 ATP11BQ9Y2G3 1177 aa19.13■□□□□ 0.65
LMNA-223ENST00000515459 A0A0G2JMZ2 1700 aa19.13■□□□□ 0.65
LMNA-223ENST00000515459 MAGEB6P1A0A0J9YX57 407 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms