RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 PRMT2P55345 433 aa15.29■□□□□ 0.04
CLCN3-210ENST00000515420 EVX2Q03828 476 aa15.29■□□□□ 0.04
CLCN3-210ENST00000515420 RAB3GAP1Q15042 981 aa15.29■□□□□ 0.04
CLCN3-210ENST00000515420 FAM110CQ1W6H9 321 aa15.29■□□□□ 0.04
CLCN3-210ENST00000515420 DYNLL2Q96FJ2 89 aa15.29■□□□□ 0.04
CLCN3-210ENST00000515420 EPB41L4AQ9HCS5 686 aaPredicted RBP15.29■□□□□ 0.04
CLCN3-210ENST00000515420 HPS5Q9UPZ3 1129 aa15.29■□□□□ 0.04
CLCN3-210ENST00000515420 PTPN22Q9Y2R2 807 aa15.29■□□□□ 0.04
CLCN3-210ENST00000515420 CYP2D7A0A087X1C5 515 aa15.28■□□□□ 0.04
CLCN3-210ENST00000515420 TDO2P48775 406 aa15.28■□□□□ 0.04
CLCN3-210ENST00000515420 SEPT2Q15019 361 aa15.28■□□□□ 0.04
CLCN3-210ENST00000515420 SLC44A5Q8NCS7 719 aa15.28■□□□□ 0.04
CLCN3-210ENST00000515420 GTF3C2Q8WUA4 911 aaPredicted RBP15.28■□□□□ 0.04
CLCN3-210ENST00000515420 SEC62Q99442 399 aaKnown RBP15.28■□□□□ 0.04
CLCN3-210ENST00000515420 FEZ1Q99689 392 aa15.28■□□□□ 0.04
CLCN3-210ENST00000515420 ASCC2Q9H1I8 757 aaPredicted RBP15.28■□□□□ 0.04
CLCN3-210ENST00000515420 ZNF287Q9HBT7 754 aa15.28■□□□□ 0.04
CLCN3-210ENST00000515420 EMILIN3Q9NT22 766 aa15.28■□□□□ 0.04
CLCN3-210ENST00000515420 ZSWIM8A7E2V4 1837 aa15.28■□□□□ 0.04
CLCN3-210ENST00000515420 TRIM6-TRIM34B2RNG4 842 aa15.27■□□□□ 0.04
CLCN3-210ENST00000515420 MPHOSPH10O00566 681 aaKnown RBP15.27■□□□□ 0.04
CLCN3-210ENST00000515420 CAPN15O75808 1086 aa15.27■□□□□ 0.04
CLCN3-210ENST00000515420 APPP05067 770 aa15.27■□□□□ 0.04
CLCN3-210ENST00000515420 HOXD10P28358 340 aa15.27■□□□□ 0.04
CLCN3-210ENST00000515420 IRX3P78415 501 aaPredicted RBP15.27■□□□□ 0.04
CLCN3-210ENST00000515420 CAP1Q01518 475 aa15.27■□□□□ 0.04
CLCN3-210ENST00000515420 IFNL3Q8IZI9 196 aa15.27■□□□□ 0.04
CLCN3-210ENST00000515420 SH2D4AQ9H788 454 aa15.27■□□□□ 0.04
CLCN3-210ENST00000515420 CCDC85CA6NKD9 419 aa15.26■□□□□ 0.03
CLCN3-210ENST00000515420 PSMC4P43686 418 aa15.26■□□□□ 0.03
CLCN3-210ENST00000515420 ARHGAP39Q9C0H5 1083 aa15.26■□□□□ 0.03
CLCN3-210ENST00000515420 NAPBQ9H115 298 aa15.26■□□□□ 0.03
CLCN3-210ENST00000515420 ZMYM6O95789 1325 aa15.25■□□□□ 0.03
CLCN3-210ENST00000515420 USP17L15C9J2P7 530 aa15.25■□□□□ 0.03
CLCN3-210ENST00000515420 USP17L13C9JLJ4 530 aa15.25■□□□□ 0.03
CLCN3-210ENST00000515420 USP17L11C9JVI0 530 aa15.25■□□□□ 0.03
CLCN3-210ENST00000515420 USP17L18D6R9N7 530 aa15.25■□□□□ 0.03
CLCN3-210ENST00000515420 USP17L22D6RA61 530 aa15.25■□□□□ 0.03
CLCN3-210ENST00000515420 USP17L17D6RBQ6 530 aa15.25■□□□□ 0.03
CLCN3-210ENST00000515420 USP17L19D6RCP7 530 aa15.25■□□□□ 0.03
CLCN3-210ENST00000515420 USP17L20D6RJB6 530 aa15.25■□□□□ 0.03
CLCN3-210ENST00000515420 HIP1O00291 1037 aa15.25■□□□□ 0.03
CLCN3-210ENST00000515420 AKR1B1P15121 316 aa15.25■□□□□ 0.03
CLCN3-210ENST00000515420 FCGRTP55899 365 aa15.25■□□□□ 0.03
CLCN3-210ENST00000515420 ICA1Q05084 483 aa15.25■□□□□ 0.03
CLCN3-210ENST00000515420 USP17L24Q0WX57 530 aa15.25■□□□□ 0.03
CLCN3-210ENST00000515420 MCMDC2Q4G0Z9 681 aa15.25■□□□□ 0.03
CLCN3-210ENST00000515420 ACER1Q8TDN7 264 aa15.25■□□□□ 0.03
CLCN3-210ENST00000515420 LPAR1Q92633 364 aa15.25■□□□□ 0.03
CLCN3-210ENST00000515420 RILPL2Q969X0 211 aa15.25■□□□□ 0.03
CLCN3-210ENST00000515420 TRIM47Q96LD4 638 aa15.25■□□□□ 0.03
CLCN3-210ENST00000515420 KANSL2Q9H9L4 492 aa15.25■□□□□ 0.03
CLCN3-210ENST00000515420 ARHGEF10LQ9HCE6 1279 aa15.25■□□□□ 0.03
CLCN3-210ENST00000515420 MORF4L1Q9UBU8 362 aa15.25■□□□□ 0.03
CLCN3-210ENST00000515420 RBBP6Q7Z6E9 1792 aaKnown RBP15.24■□□□□ 0.03
CLCN3-210ENST00000515420 A0A0D9SFI3 127 aa15.24■□□□□ 0.03
CLCN3-210ENST00000515420 MINDY4BA8MYZ0 360 aa15.24■□□□□ 0.03
CLCN3-210ENST00000515420 SMIM22K7EJ46 135 aa15.24■□□□□ 0.03
CLCN3-210ENST00000515420 FOXP2O15409 715 aa15.24■□□□□ 0.03
CLCN3-210ENST00000515420 SLC3A2P08195 630 aaKnown RBP15.24■□□□□ 0.03
CLCN3-210ENST00000515420 VCAM1P19320 739 aa15.24■□□□□ 0.03
CLCN3-210ENST00000515420 RASA1P20936 1047 aa15.24■□□□□ 0.03
CLCN3-210ENST00000515420 MFAP1P55081 439 aaKnown RBP15.24■□□□□ 0.03
CLCN3-210ENST00000515420 HERVK_113P62684 666 aa15.24■□□□□ 0.03
CLCN3-210ENST00000515420 ALX1Q15699 326 aa15.24■□□□□ 0.03
CLCN3-210ENST00000515420 LBX2Q6XYB7 198 aa15.24■□□□□ 0.03
CLCN3-210ENST00000515420 ANKRD13CQ8N6S4 541 aa15.24■□□□□ 0.03
CLCN3-210ENST00000515420 ARMC5Q96C12 935 aa15.24■□□□□ 0.03
CLCN3-210ENST00000515420 MKNK2Q9HBH9 465 aa15.24■□□□□ 0.03
CLCN3-210ENST00000515420 SRRDQ9UH36 339 aa15.24■□□□□ 0.03
CLCN3-210ENST00000515420 TMX2Q9Y320 296 aa15.24■□□□□ 0.03
CLCN3-210ENST00000515420 PLIN4Q96Q06 1357 aa15.24■□□□□ 0.03
CLCN3-210ENST00000515420 A0A1W2PRG0 241 aa15.23■□□□□ 0.03
CLCN3-210ENST00000515420 FMNL1O95466 1100 aaPredicted RBP15.23■□□□□ 0.03
CLCN3-210ENST00000515420 SDSP20132 328 aa15.23■□□□□ 0.03
CLCN3-210ENST00000515420 CTGFP29279 349 aa15.23■□□□□ 0.03
CLCN3-210ENST00000515420 PDE4BQ07343 736 aa15.23■□□□□ 0.03
CLCN3-210ENST00000515420 PPARAQ07869 468 aa15.23■□□□□ 0.03
CLCN3-210ENST00000515420 ZYXQ15942 572 aaKnown RBP15.23■□□□□ 0.03
CLCN3-210ENST00000515420 CATSPERGQ6ZRH7 1159 aa15.23■□□□□ 0.03
CLCN3-210ENST00000515420 CCDC129Q6ZRS4 1044 aa15.23■□□□□ 0.03
CLCN3-210ENST00000515420 FAM227BQ96M60 508 aa15.23■□□□□ 0.03
CLCN3-210ENST00000515420 PTCH2Q9Y6C5 1203 aa15.23■□□□□ 0.03
CLCN3-210ENST00000515420 CENPFP49454 3210 aa15.23■□□□□ 0.03
CLCN3-210ENST00000515420 DOCK3Q8IZD9 2030 aa15.22■□□□□ 0.03
CLCN3-210ENST00000515420 CCDC171Q6TFL3 1326 aa15.22■□□□□ 0.03
CLCN3-210ENST00000515420 MYH4Q9Y623 1939 aa15.22■□□□□ 0.03
CLCN3-210ENST00000515420 PDE4AP27815 886 aa15.22■□□□□ 0.03
CLCN3-210ENST00000515420 RGS19P49795 217 aa15.22■□□□□ 0.03
CLCN3-210ENST00000515420 NMIQ13287 307 aaPredicted RBP15.22■□□□□ 0.03
CLCN3-210ENST00000515420 TTC22Q5TAA0 569 aa15.22■□□□□ 0.03
CLCN3-210ENST00000515420 NBPF11Q86T75 865 aa15.22■□□□□ 0.03
CLCN3-210ENST00000515420 SIAH1Q8IUQ4 282 aa15.22■□□□□ 0.03
CLCN3-210ENST00000515420 P2RX7Q99572 595 aaKnown RBP15.22■□□□□ 0.03
CLCN3-210ENST00000515420 VCPKMTQ9H867 229 aa15.22■□□□□ 0.03
CLCN3-210ENST00000515420 ANAPC4Q9UJX5 808 aa15.22■□□□□ 0.03
CLCN3-210ENST00000515420 SYNPO2Q9UMS6 1093 aa15.22■□□□□ 0.03
CLCN3-210ENST00000515420 PARP14Q460N5 1801 aa15.22■□□□□ 0.03
CLCN3-210ENST00000515420 RLFQ13129 1914 aa15.21■□□□□ 0.03
CLCN3-210ENST00000515420 MYPNQ86TC9 1320 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms