RNA–Protein interactions for RNA: ENST00000515339.5

PACRGL-233, Transcript of parkin coregulated like, humanhuman

TSL 4

Gene PACRGL, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-233ENST00000515339 SMIM22K7EJ46 135 aa26.6■■□□□ 1.85
PACRGL-233ENST00000515339 SHISA4Q96DD7 197 aa26.6■■□□□ 1.85
PACRGL-233ENST00000515339 C12orf42Q96LP6 360 aa26.6■■□□□ 1.85
PACRGL-233ENST00000515339 KIAA1683Q9H0B3 1180 aa26.6■■□□□ 1.85
PACRGL-233ENST00000515339 RNF208Q9H0X6 261 aa26.6■■□□□ 1.85
PACRGL-233ENST00000515339 PLXNB2O15031 1838 aa26.6■■□□□ 1.85
PACRGL-233ENST00000515339 PXYLP1Q8TE99 480 aa26.59■■□□□ 1.85
PACRGL-233ENST00000515339 CRBNQ96SW2 442 aa26.59■■□□□ 1.85
PACRGL-233ENST00000515339 UNC93B1Q9H1C4 597 aa26.59■■□□□ 1.85
PACRGL-233ENST00000515339 RBPJLQ9UBG7 517 aa26.59■■□□□ 1.85
PACRGL-233ENST00000515339 SLC4A4Q9Y6R1 1079 aa26.59■■□□□ 1.85
PACRGL-233ENST00000515339 INHAP05111 366 aa26.58■■□□□ 1.85
PACRGL-233ENST00000515339 USP14P54578 494 aa26.58■■□□□ 1.85
PACRGL-233ENST00000515339 POTEEQ6S8J3 1075 aa26.58■■□□□ 1.85
PACRGL-233ENST00000515339 KBTBD3Q8NAB2 608 aa26.58■■□□□ 1.85
PACRGL-233ENST00000515339 GPRC5AQ8NFJ5 357 aa26.58■■□□□ 1.85
PACRGL-233ENST00000515339 PAGR1Q9BTK6 254 aa26.58■■□□□ 1.85
PACRGL-233ENST00000515339 SWAP70Q9UH65 585 aa26.58■■□□□ 1.85
PACRGL-233ENST00000515339 VCAM1P19320 739 aa26.57■■□□□ 1.84
PACRGL-233ENST00000515339 OTUD7AQ8TE49 926 aaPredicted RBP26.57■■□□□ 1.84
PACRGL-233ENST00000515339 GJD2Q9UKL4 321 aa26.57■■□□□ 1.84
PACRGL-233ENST00000515339 USP17L15C9J2P7 530 aa26.56■■□□□ 1.84
PACRGL-233ENST00000515339 USP17L13C9JLJ4 530 aa26.56■■□□□ 1.84
PACRGL-233ENST00000515339 USP17L12C9JPN9 530 aa26.56■■□□□ 1.84
PACRGL-233ENST00000515339 USP17L11C9JVI0 530 aa26.56■■□□□ 1.84
PACRGL-233ENST00000515339 USP17L21D6R901 530 aa26.56■■□□□ 1.84
PACRGL-233ENST00000515339 USP17L18D6R9N7 530 aa26.56■■□□□ 1.84
PACRGL-233ENST00000515339 USP17L22D6RA61 530 aa26.56■■□□□ 1.84
PACRGL-233ENST00000515339 USP17L17D6RBQ6 530 aa26.56■■□□□ 1.84
PACRGL-233ENST00000515339 USP17L19D6RCP7 530 aa26.56■■□□□ 1.84
PACRGL-233ENST00000515339 USP17L20D6RJB6 530 aa26.56■■□□□ 1.84
PACRGL-233ENST00000515339 GJB1P08034 283 aa26.56■■□□□ 1.84
PACRGL-233ENST00000515339 ERVK-9P63128 1117 aa26.56■■□□□ 1.84
PACRGL-233ENST00000515339 ERVK-24P63145 666 aa26.56■■□□□ 1.84
PACRGL-233ENST00000515339 USP17L24Q0WX57 530 aa26.56■■□□□ 1.84
PACRGL-233ENST00000515339 C12orf60Q5U649 245 aa26.56■■□□□ 1.84
PACRGL-233ENST00000515339 A0A1W2PRG0 241 aa26.55■■□□□ 1.84
PACRGL-233ENST00000515339 Q3C1V9 767 aa26.55■■□□□ 1.84
PACRGL-233ENST00000515339 CLEC10AQ8IUN9 316 aa26.55■■□□□ 1.84
PACRGL-233ENST00000515339 AMOTL1Q8IY63 956 aa26.55■■□□□ 1.84
PACRGL-233ENST00000515339 DDRGK1Q96HY6 314 aa26.55■■□□□ 1.84
PACRGL-233ENST00000515339 AKR1B1P15121 316 aa26.54■■□□□ 1.84
PACRGL-233ENST00000515339 GJA8P48165 433 aa26.54■■□□□ 1.84
PACRGL-233ENST00000515339 CATSPERGQ6ZRH7 1159 aa26.54■■□□□ 1.84
PACRGL-233ENST00000515339 TMEM179Q6ZVK1 233 aa26.54■■□□□ 1.84
PACRGL-233ENST00000515339 NKX2-3Q8TAU0 364 aa26.54■■□□□ 1.84
PACRGL-233ENST00000515339 GTF3C2Q8WUA4 911 aaPredicted RBP26.54■■□□□ 1.84
PACRGL-233ENST00000515339 PORCNQ9H237 461 aa26.54■■□□□ 1.84
PACRGL-233ENST00000515339 RNF113AO15541 343 aaKnown RBP26.53■■□□□ 1.84
PACRGL-233ENST00000515339 CDK8P49336 464 aa26.53■■□□□ 1.84
PACRGL-233ENST00000515339 CTR9Q6PD62 1173 aa26.53■■□□□ 1.84
PACRGL-233ENST00000515339 OSBP2Q969R2 916 aa26.53■■□□□ 1.84
PACRGL-233ENST00000515339 STRBPQ96SI9 672 aaKnown RBP26.53■■□□□ 1.84
PACRGL-233ENST00000515339 RPAP3Q9H6T3 665 aaPredicted RBP26.53■■□□□ 1.84
PACRGL-233ENST00000515339 CNMDO75829 334 aa26.52■■□□□ 1.84
PACRGL-233ENST00000515339 TTC41PQ6P2S7 1318 aa26.52■■□□□ 1.84
PACRGL-233ENST00000515339 C16orf86Q6ZW13 317 aa26.52■■□□□ 1.84
PACRGL-233ENST00000515339 PI4K2BQ8TCG2 481 aa26.52■■□□□ 1.84
PACRGL-233ENST00000515339 U2AF1L4Q8WU68 220 aaKnown RBP26.52■■□□□ 1.84
PACRGL-233ENST00000515339 MAPK4P31152 587 aa26.51■■□□□ 1.83
PACRGL-233ENST00000515339 APPBP2Q92624 585 aa26.51■■□□□ 1.83
PACRGL-233ENST00000515339 HMGCRP04035 888 aa26.5■■□□□ 1.83
PACRGL-233ENST00000515339 CYP2B6P20813 491 aa26.5■■□□□ 1.83
PACRGL-233ENST00000515339 TRIM32Q13049 653 aa26.5■■□□□ 1.83
PACRGL-233ENST00000515339 KIAA1755Q5JYT7 1200 aa26.5■■□□□ 1.83
PACRGL-233ENST00000515339 CCAR1Q8IX12 1150 aaKnown RBP26.5■■□□□ 1.83
PACRGL-233ENST00000515339 DEFB118Q96PH6 123 aa26.5■■□□□ 1.83
PACRGL-233ENST00000515339 RABGAP1Q9Y3P9 1069 aa26.5■■□□□ 1.83
PACRGL-233ENST00000515339 GSG1L2A8MUP6 293 aa26.49■■□□□ 1.83
PACRGL-233ENST00000515339 M0R2C6 588 aa26.49■■□□□ 1.83
PACRGL-233ENST00000515339 ERC2O15083 957 aa26.49■■□□□ 1.83
PACRGL-233ENST00000515339 ZFYP08048 801 aaPredicted RBP26.49■■□□□ 1.83
PACRGL-233ENST00000515339 ICA1Q05084 483 aa26.49■■□□□ 1.83
PACRGL-233ENST00000515339 SIAH1Q8IUQ4 282 aa26.49■■□□□ 1.83
PACRGL-233ENST00000515339 NUDT12Q9BQG2 462 aa26.49■■□□□ 1.83
PACRGL-233ENST00000515339 PAK6Q9NQU5 681 aaPredicted RBP26.49■■□□□ 1.83
PACRGL-233ENST00000515339 ARPP21Q9UBL0 812 aaPredicted RBP26.49■■□□□ 1.83
PACRGL-233ENST00000515339 SPDYE16A6NNV3 312 aaPredicted RBP26.48■■□□□ 1.83
PACRGL-233ENST00000515339 GPAA1O43292 621 aa26.48■■□□□ 1.83
PACRGL-233ENST00000515339 SGPL1O95470 568 aa26.48■■□□□ 1.83
PACRGL-233ENST00000515339 MX1P20591 662 aa26.48■■□□□ 1.83
PACRGL-233ENST00000515339 GPR142Q7Z601 462 aa26.48■■□□□ 1.83
PACRGL-233ENST00000515339 SOCS4Q8WXH5 440 aa26.48■■□□□ 1.83
PACRGL-233ENST00000515339 TRIB2Q92519 343 aa26.48■■□□□ 1.83
PACRGL-233ENST00000515339 CCDC17Q96LX7 622 aa26.48■■□□□ 1.83
PACRGL-233ENST00000515339 TANGO6Q9C0B7 1094 aa26.48■■□□□ 1.83
PACRGL-233ENST00000515339 ARHGEF10LQ9HCE6 1279 aa26.48■■□□□ 1.83
PACRGL-233ENST00000515339 BTBD7Q9P203 1132 aa26.48■■□□□ 1.83
PACRGL-233ENST00000515339 RLFQ13129 1914 aa26.47■■□□□ 1.83
PACRGL-233ENST00000515339 GLRX3O76003 335 aaKnown RBP26.47■■□□□ 1.83
PACRGL-233ENST00000515339 LBX2Q6XYB7 198 aa26.47■■□□□ 1.83
PACRGL-233ENST00000515339 PLEKHH3Q7Z736 793 aa26.47■■□□□ 1.83
PACRGL-233ENST00000515339 UBE2Q1Q7Z7E8 422 aa26.47■■□□□ 1.83
PACRGL-233ENST00000515339 STK11IPQ8N1F8 1099 aa26.47■■□□□ 1.83
PACRGL-233ENST00000515339 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.47■■□□□ 1.83
PACRGL-233ENST00000515339 CWC22Q9HCG8 908 aaKnown RBP26.47■■□□□ 1.83
PACRGL-233ENST00000515339 ANKRD45Q5TZF3 282 aa26.46■■□□□ 1.83
PACRGL-233ENST00000515339 SPICE1Q8N0Z3 855 aa26.46■■□□□ 1.83
PACRGL-233ENST00000515339 USP6NLQ92738 828 aa26.46■■□□□ 1.83
PACRGL-233ENST00000515339 FSD1Q9BTV5 496 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms