RNA–Protein interactions for RNA: ENST00000515215.6

SNCAIP-221, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,708 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-221ENST00000515215 APOBEC3FQ8IUX4 373 aaKnown RBP14.66□□□□□ -0.06
SNCAIP-221ENST00000515215 RTN4Q9NQC3 1192 aaKnown RBP14.66□□□□□ -0.06
SNCAIP-221ENST00000515215 WDR90Q96KV7 1748 aa14.66□□□□□ -0.06
SNCAIP-221ENST00000515215 MYH4Q9Y623 1939 aa14.66□□□□□ -0.06
SNCAIP-221ENST00000515215 GOLGA8AA7E2F4 631 aa14.66□□□□□ -0.06
SNCAIP-221ENST00000515215 DHX16O60231 1041 aaKnown RBP14.66□□□□□ -0.06
SNCAIP-221ENST00000515215 DDAH1O94760 285 aa14.66□□□□□ -0.06
SNCAIP-221ENST00000515215 ADD1P35611 737 aaKnown RBP14.66□□□□□ -0.06
SNCAIP-221ENST00000515215 RRP1BQ14684 758 aaKnown RBP14.66□□□□□ -0.06
SNCAIP-221ENST00000515215 NTRK3Q16288 839 aa14.66□□□□□ -0.06
SNCAIP-221ENST00000515215 CERKLQ49MI3 558 aaPredicted RBP14.66□□□□□ -0.06
SNCAIP-221ENST00000515215 TMEM47Q9BQJ4 181 aa14.66□□□□□ -0.06
SNCAIP-221ENST00000515215 TRIM34Q9BYJ4 488 aa14.66□□□□□ -0.06
SNCAIP-221ENST00000515215 DEFB129Q9H1M3 183 aa14.66□□□□□ -0.06
SNCAIP-221ENST00000515215 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.66□□□□□ -0.06
SNCAIP-221ENST00000515215 MTMR4Q9NYA4 1195 aa14.66□□□□□ -0.06
SNCAIP-221ENST00000515215 PITPNM2Q9BZ72 1349 aa14.65□□□□□ -0.06
SNCAIP-221ENST00000515215 PKP1Q13835 747 aa14.65□□□□□ -0.06
SNCAIP-221ENST00000515215 CATIPQ7Z7H3 387 aa14.65□□□□□ -0.06
SNCAIP-221ENST00000515215 CCDC144CPQ8IYA2 1237 aa14.65□□□□□ -0.06
SNCAIP-221ENST00000515215 FANCBQ8NB91 859 aa14.65□□□□□ -0.06
SNCAIP-221ENST00000515215 GGA3Q9NZ52 723 aa14.65□□□□□ -0.06
SNCAIP-221ENST00000515215 STX8Q9UNK0 236 aa14.65□□□□□ -0.06
SNCAIP-221ENST00000515215 PTPDC1A2A3K4 754 aa14.64□□□□□ -0.07
SNCAIP-221ENST00000515215 CALM1P0DP23 149 aa14.64□□□□□ -0.07
SNCAIP-221ENST00000515215 CALM2P0DP24 149 aa14.64□□□□□ -0.07
SNCAIP-221ENST00000515215 CALM3P0DP25 149 aa14.64□□□□□ -0.07
SNCAIP-221ENST00000515215 PPP2R5BQ15173 497 aa14.64□□□□□ -0.07
SNCAIP-221ENST00000515215 RTN1Q16799 776 aa14.64□□□□□ -0.07
SNCAIP-221ENST00000515215 SHROOM1Q2M3G4 852 aaPredicted RBP14.64□□□□□ -0.07
SNCAIP-221ENST00000515215 PNMA1Q8ND90 353 aa14.64□□□□□ -0.07
SNCAIP-221ENST00000515215 KAT14Q9H8E8 782 aa14.64□□□□□ -0.07
SNCAIP-221ENST00000515215 GUCY1A2P33402 732 aa14.63□□□□□ -0.07
SNCAIP-221ENST00000515215 JAG1P78504 1218 aa14.63□□□□□ -0.07
SNCAIP-221ENST00000515215 NUCB2P80303 420 aa14.63□□□□□ -0.07
SNCAIP-221ENST00000515215 HMGN5P82970 282 aaKnown RBP14.63□□□□□ -0.07
SNCAIP-221ENST00000515215 RAB3GAP1Q15042 981 aa14.63□□□□□ -0.07
SNCAIP-221ENST00000515215 NUP133Q8WUM0 1156 aa14.63□□□□□ -0.07
SNCAIP-221ENST00000515215 MAP3K14Q99558 947 aa14.63□□□□□ -0.07
SNCAIP-221ENST00000515215 ZDHHC9Q9Y397 364 aa14.63□□□□□ -0.07
SNCAIP-221ENST00000515215 ATAD5Q96QE3 1844 aa14.63□□□□□ -0.07
SNCAIP-221ENST00000515215 MPHOSPH10O00566 681 aaKnown RBP14.63□□□□□ -0.07
SNCAIP-221ENST00000515215 CPLX1O14810 134 aa14.63□□□□□ -0.07
SNCAIP-221ENST00000515215 GDF11O95390 407 aa14.63□□□□□ -0.07
SNCAIP-221ENST00000515215 TTLL1O95922 423 aa14.63□□□□□ -0.07
SNCAIP-221ENST00000515215 TOP1P11387 765 aaKnown RBP14.63□□□□□ -0.07
SNCAIP-221ENST00000515215 FDPSP14324 419 aaKnown RBP14.63□□□□□ -0.07
SNCAIP-221ENST00000515215 SYT1P21579 422 aa14.63□□□□□ -0.07
SNCAIP-221ENST00000515215 ABCB5Q2M3G0 1257 aa14.63□□□□□ -0.07
SNCAIP-221ENST00000515215 TMEM179Q6ZVK1 233 aa14.63□□□□□ -0.07
SNCAIP-221ENST00000515215 MIGA2Q7L4E1 593 aa14.63□□□□□ -0.07
SNCAIP-221ENST00000515215 CLEC10AQ8IUN9 316 aa14.63□□□□□ -0.07
SNCAIP-221ENST00000515215 PPP2R3BQ9Y5P8 575 aa14.63□□□□□ -0.07
SNCAIP-221ENST00000515215 CCDC196A0A1B0GTZ2 297 aa14.62□□□□□ -0.07
SNCAIP-221ENST00000515215 POTECB2RU33 542 aa14.62□□□□□ -0.07
SNCAIP-221ENST00000515215 BRD1O95696 1058 aa14.62□□□□□ -0.07
SNCAIP-221ENST00000515215 IFNAR1P17181 557 aa14.62□□□□□ -0.07
SNCAIP-221ENST00000515215 NBPF12Q5TAG4 269 aaPredicted RBP14.62□□□□□ -0.07
SNCAIP-221ENST00000515215 USP50Q70EL3 339 aaPredicted RBP14.62□□□□□ -0.07
SNCAIP-221ENST00000515215 DDX11Q96FC9 970 aa14.62□□□□□ -0.07
SNCAIP-221ENST00000515215 RBM28Q9NW13 759 aaKnown RBP14.62□□□□□ -0.07
SNCAIP-221ENST00000515215 MYH6P13533 1939 aa14.62□□□□□ -0.07
SNCAIP-221ENST00000515215 PHF20L1A8MW92 1017 aa14.61□□□□□ -0.07
SNCAIP-221ENST00000515215 CDKL5O76039 1030 aa14.61□□□□□ -0.07
SNCAIP-221ENST00000515215 GH2P01242 217 aa14.61□□□□□ -0.07
SNCAIP-221ENST00000515215 EPHX2P34913 555 aa14.61□□□□□ -0.07
SNCAIP-221ENST00000515215 FUT2Q10981 343 aa14.61□□□□□ -0.07
SNCAIP-221ENST00000515215 GRM4Q14833 912 aa14.61□□□□□ -0.07
SNCAIP-221ENST00000515215 SEPT2Q15019 361 aa14.61□□□□□ -0.07
SNCAIP-221ENST00000515215 PPP4R3BQ5MIZ7 849 aa14.61□□□□□ -0.07
SNCAIP-221ENST00000515215 CPLX2Q6PUV4 134 aaKnown RBP14.61□□□□□ -0.07
SNCAIP-221ENST00000515215 NBPF11Q86T75 865 aa14.61□□□□□ -0.07
SNCAIP-221ENST00000515215 SIAH1Q8IUQ4 282 aa14.61□□□□□ -0.07
SNCAIP-221ENST00000515215 MKL1Q969V6 931 aa14.61□□□□□ -0.07
SNCAIP-221ENST00000515215 KANSL2Q9H9L4 492 aa14.61□□□□□ -0.07
SNCAIP-221ENST00000515215 NYAP2Q9P242 653 aa14.61□□□□□ -0.07
SNCAIP-221ENST00000515215 SSC5DA1L4H1 1573 aa14.61□□□□□ -0.07
SNCAIP-221ENST00000515215 STX6O43752 255 aa14.61□□□□□ -0.07
SNCAIP-221ENST00000515215 PPFIA3O75145 1194 aa14.61□□□□□ -0.07
SNCAIP-221ENST00000515215 TAF1DQ9H5J8 278 aaPredicted RBP14.61□□□□□ -0.07
SNCAIP-221ENST00000515215 CLIP2Q9UDT6 1046 aa14.61□□□□□ -0.07
SNCAIP-221ENST00000515215 STK36Q9NRP7 1315 aa14.6□□□□□ -0.07
SNCAIP-221ENST00000515215 IQCA1LA6NCM1 817 aa14.6□□□□□ -0.07
SNCAIP-221ENST00000515215 PLEKHA8P1O95397 391 aa14.6□□□□□ -0.07
SNCAIP-221ENST00000515215 PDCP20941 246 aa14.6□□□□□ -0.07
SNCAIP-221ENST00000515215 CAP2P40123 477 aa14.6□□□□□ -0.07
SNCAIP-221ENST00000515215 LARP1BQ659C4 914 aaKnown RBP14.6□□□□□ -0.07
SNCAIP-221ENST00000515215 TMTC3Q6ZXV5 915 aa14.6□□□□□ -0.07
SNCAIP-221ENST00000515215 LRRC47Q8N1G4 583 aaKnown RBP14.6□□□□□ -0.07
SNCAIP-221ENST00000515215 CTCFLQ8NI51 663 aaPredicted RBP14.6□□□□□ -0.07
SNCAIP-221ENST00000515215 ZC3H15Q8WU90 426 aaKnown RBP14.6□□□□□ -0.07
SNCAIP-221ENST00000515215 PHKBQ93100 1093 aa14.6□□□□□ -0.07
SNCAIP-221ENST00000515215 CABP5Q9NP86 173 aa14.6□□□□□ -0.07
SNCAIP-221ENST00000515215 ORC3Q9UBD5 711 aaPredicted RBP14.6□□□□□ -0.07
SNCAIP-221ENST00000515215 MAD2L2Q9UI95 211 aa14.6□□□□□ -0.07
SNCAIP-221ENST00000515215 ZBTB21Q9ULJ3 1066 aa14.6□□□□□ -0.07
SNCAIP-221ENST00000515215 DOCK1Q14185 1865 aa14.59□□□□□ -0.07
SNCAIP-221ENST00000515215 PALM3A6NDB9 673 aaPredicted RBP14.59□□□□□ -0.07
SNCAIP-221ENST00000515215 FMNL1O95466 1100 aaPredicted RBP14.59□□□□□ -0.07
SNCAIP-221ENST00000515215 SNHG28P0DPA3 235 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms