RNA–Protein interactions for RNA: ENST00000515160.5

CAST-243, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-243ENST00000515160 VIL1P09327 827 aaKnown RBP7.7□□□□□ -1.18
CAST-243ENST00000515160 NCAPHQ15003 741 aa7.7□□□□□ -1.18
CAST-243ENST00000515160 PERM1Q5SV97 790 aa7.7□□□□□ -1.18
CAST-243ENST00000515160 TAB3Q8N5C8 712 aaPredicted RBP7.7□□□□□ -1.18
CAST-243ENST00000515160 GALNT6Q8NCL4 622 aa7.7□□□□□ -1.18
CAST-243ENST00000515160 STAG1Q8WVM7 1258 aa7.7□□□□□ -1.18
CAST-243ENST00000515160 TYW1Q9NV66 732 aaKnown RBP7.7□□□□□ -1.18
CAST-243ENST00000515160 PCDHA4Q9UN74 947 aa7.7□□□□□ -1.18
CAST-243ENST00000515160 SLC6A14Q9UN76 642 aa7.7□□□□□ -1.18
CAST-243ENST00000515160 TRIM33Q9UPN9 1127 aa7.7□□□□□ -1.18
CAST-243ENST00000515160 PPME1Q9Y570 386 aa7.7□□□□□ -1.18
CAST-243ENST00000515160 PRR36Q9H6K5 1346 aa7.7□□□□□ -1.18
CAST-243ENST00000515160 RNF17Q9BXT8 1623 aaKnown RBP7.7□□□□□ -1.18
CAST-243ENST00000515160 TROQ12816 1431 aaPredicted RBP7.69□□□□□ -1.18
CAST-243ENST00000515160 MED14O60244 1454 aa7.69□□□□□ -1.18
CAST-243ENST00000515160 EIF4EBP3O60516 100 aaPredicted RBP7.69□□□□□ -1.18
CAST-243ENST00000515160 PDGFRBP09619 1106 aa7.69□□□□□ -1.18
CAST-243ENST00000515160 ITGA6P23229 1130 aa7.69□□□□□ -1.18
CAST-243ENST00000515160 CDC27P30260 824 aa7.69□□□□□ -1.18
CAST-243ENST00000515160 HSP90AB2PQ58FF8 381 aa7.69□□□□□ -1.18
CAST-243ENST00000515160 DALRD3Q5D0E6 543 aaKnown RBP7.69□□□□□ -1.18
CAST-243ENST00000515160 HGSNATQ68CP4 663 aa7.69□□□□□ -1.18
CAST-243ENST00000515160 MRM1Q6IN84 353 aaKnown RBP7.69□□□□□ -1.18
CAST-243ENST00000515160 VHLLQ6RSH7 139 aa7.69□□□□□ -1.18
CAST-243ENST00000515160 KRT26Q7Z3Y9 468 aa7.69□□□□□ -1.18
CAST-243ENST00000515160 TNFRSF25Q93038 417 aa7.69□□□□□ -1.18
CAST-243ENST00000515160 ACSBG1Q96GR2 724 aa7.69□□□□□ -1.18
CAST-243ENST00000515160 ENAMQ9NRM1 1142 aa7.69□□□□□ -1.18
CAST-243ENST00000515160 CACNA2D2Q9NY47 1150 aa7.69□□□□□ -1.18
CAST-243ENST00000515160 CHPF2Q9P2E5 772 aa7.69□□□□□ -1.18
CAST-243ENST00000515160 CD2APQ9Y5K6 639 aa7.69□□□□□ -1.18
CAST-243ENST00000515160 DEPDC5O75140 1603 aa7.68□□□□□ -1.18
CAST-243ENST00000515160 UPK3BL1B0FP48 263 aa7.68□□□□□ -1.18
CAST-243ENST00000515160 UPK3BL2E5RIL1 263 aa7.68□□□□□ -1.18
CAST-243ENST00000515160 GFRA2O00451 464 aa7.68□□□□□ -1.18
CAST-243ENST00000515160 SOX1O00570 391 aaPredicted RBP7.68□□□□□ -1.18
CAST-243ENST00000515160 CDK8P49336 464 aa7.68□□□□□ -1.18
CAST-243ENST00000515160 PCBP4P57723 403 aaKnown RBP7.68□□□□□ -1.18
CAST-243ENST00000515160 LONRF2Q1L5Z9 754 aa7.68□□□□□ -1.18
CAST-243ENST00000515160 TMEM67Q5HYA8 995 aa7.68□□□□□ -1.18
CAST-243ENST00000515160 WIPI1Q5MNZ9 446 aaPredicted RBP7.68□□□□□ -1.18
CAST-243ENST00000515160 LCE3BQ5TA77 95 aa7.68□□□□□ -1.18
CAST-243ENST00000515160 CACTIN-AS1Q8N1I8 211 aa7.68□□□□□ -1.18
CAST-243ENST00000515160 Q8N3U1 123 aa7.68□□□□□ -1.18
CAST-243ENST00000515160 GPBAR1Q8TDU6 330 aa7.68□□□□□ -1.18
CAST-243ENST00000515160 WHAMMQ8TF30 809 aa7.68□□□□□ -1.18
CAST-243ENST00000515160 SPATA9Q9BWV2 254 aa7.68□□□□□ -1.18
CAST-243ENST00000515160 FRRS1LQ9P0K9 344 aa7.68□□□□□ -1.18
CAST-243ENST00000515160 GMIPQ9P107 970 aa7.68□□□□□ -1.18
CAST-243ENST00000515160 G3BP2Q9UN86 482 aaKnown RBP7.68□□□□□ -1.18
CAST-243ENST00000515160 SNCAIPQ9Y6H5 919 aa7.68□□□□□ -1.18
CAST-243ENST00000515160 CDC42BPAQ5VT25 1732 aa7.67□□□□□ -1.18
CAST-243ENST00000515160 H3BRJ5 948 aa7.67□□□□□ -1.18
CAST-243ENST00000515160 FAM153BP0C7A2 387 aa7.67□□□□□ -1.18
CAST-243ENST00000515160 BMP4P12644 408 aa7.67□□□□□ -1.18
CAST-243ENST00000515160 EPHA1P21709 976 aa7.67□□□□□ -1.18
CAST-243ENST00000515160 CNGA1P29973 690 aa7.67□□□□□ -1.18
CAST-243ENST00000515160 GSTM4Q03013 218 aa7.67□□□□□ -1.18
CAST-243ENST00000515160 PLA2G4EQ3MJ16 856 aa7.67□□□□□ -1.18
CAST-243ENST00000515160 ZC3H12BQ5HYM0 836 aaKnown RBP7.67□□□□□ -1.18
CAST-243ENST00000515160 INTS3Q68E01 1043 aaKnown RBP7.67□□□□□ -1.18
CAST-243ENST00000515160 GDF6Q6KF10 455 aaPredicted RBP7.67□□□□□ -1.18
CAST-243ENST00000515160 UNC5AQ6ZN44 842 aa7.67□□□□□ -1.18
CAST-243ENST00000515160 SV2AQ7L0J3 742 aa7.67□□□□□ -1.18
CAST-243ENST00000515160 HDXQ7Z353 690 aa7.67□□□□□ -1.18
CAST-243ENST00000515160 SLC26A8Q96RN1 970 aa7.67□□□□□ -1.18
CAST-243ENST00000515160 SPOCK3Q9BQ16 436 aa7.67□□□□□ -1.18
CAST-243ENST00000515160 LPIN3Q9BQK8 851 aa7.67□□□□□ -1.18
CAST-243ENST00000515160 ZC3H12CQ9C0D7 883 aaKnown RBP7.67□□□□□ -1.18
CAST-243ENST00000515160 EPN3Q9H201 632 aa7.67□□□□□ -1.18
CAST-243ENST00000515160 SOX17Q9H6I2 414 aaPredicted RBP7.67□□□□□ -1.18
CAST-243ENST00000515160 PHAXQ9H814 394 aaKnown RBP7.67□□□□□ -1.18
CAST-243ENST00000515160 AVENQ9NQS1 362 aaPredicted RBP7.67□□□□□ -1.18
CAST-243ENST00000515160 REV1Q9UBZ9 1251 aa7.67□□□□□ -1.18
CAST-243ENST00000515160 NAGPAQ9UK23 515 aa7.67□□□□□ -1.18
CAST-243ENST00000515160 CORINQ9Y5Q5 1042 aa7.67□□□□□ -1.18
CAST-243ENST00000515160 INO80Q9ULG1 1556 aaPredicted RBP7.67□□□□□ -1.18
CAST-243ENST00000515160 ZC3H13Q5T200 1668 aaKnown RBP7.67□□□□□ -1.18
CAST-243ENST00000515160 IQCA1LA6NCM1 817 aa7.66□□□□□ -1.18
CAST-243ENST00000515160 CYP11A1P05108 521 aa7.66□□□□□ -1.18
CAST-243ENST00000515160 NME1P15531 152 aaKnown RBP7.66□□□□□ -1.18
CAST-243ENST00000515160 ADH7P40394 386 aa7.66□□□□□ -1.18
CAST-243ENST00000515160 ARL4DP49703 201 aa7.66□□□□□ -1.18
CAST-243ENST00000515160 HNRNPUQ00839 825 aaKnown RBP eCLIP7.66□□□□□ -1.18
CAST-243ENST00000515160 C21orf62-AS1Q17RA5 79 aa7.66□□□□□ -1.18
CAST-243ENST00000515160 RNFT1Q5M7Z0 435 aa7.66□□□□□ -1.18
CAST-243ENST00000515160 OVOS1Q6IE37 1185 aa7.66□□□□□ -1.18
CAST-243ENST00000515160 LRFN4Q6PJG9 635 aa7.66□□□□□ -1.18
CAST-243ENST00000515160 FERMT3Q86UX7 667 aa7.66□□□□□ -1.18
CAST-243ENST00000515160 LRRC47Q8N1G4 583 aaKnown RBP7.66□□□□□ -1.18
CAST-243ENST00000515160 ATG4CQ96DT6 458 aa7.66□□□□□ -1.18
CAST-243ENST00000515160 PLPPR2Q96GM1 343 aa7.66□□□□□ -1.18
CAST-243ENST00000515160 CEP89Q96ST8 783 aa7.66□□□□□ -1.18
CAST-243ENST00000515160 CORO1BQ9BR76 489 aa7.66□□□□□ -1.18
CAST-243ENST00000515160 KRT82Q9NSB4 513 aa7.66□□□□□ -1.18
CAST-243ENST00000515160 SYNMO15061 1565 aa7.66□□□□□ -1.18
CAST-243ENST00000515160 CCDC163A0A0D9SF12 145 aa7.65□□□□□ -1.18
CAST-243ENST00000515160 CDC14CA4D256 554 aa7.65□□□□□ -1.18
CAST-243ENST00000515160 SLC22A31A6NKX4 558 aa7.65□□□□□ -1.18
CAST-243ENST00000515160 GPR25O00155 361 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms