RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 ZNF274Q96GC6 653 aaPredicted RBP19.71■□□□□ 0.75
AP3S1-208ENST00000515066 ZSCAN31Q96LW9 406 aaPredicted RBP19.71■□□□□ 0.75
AP3S1-208ENST00000515066 SH2B1Q9NRF2 756 aaPredicted RBP19.71■□□□□ 0.75
AP3S1-208ENST00000515066 BAZ2BQ9UIF8 2168 aaKnown RBP19.71■□□□□ 0.75
AP3S1-208ENST00000515066 GH2P01242 217 aa19.71■□□□□ 0.75
AP3S1-208ENST00000515066 CAP2P40123 477 aa19.71■□□□□ 0.75
AP3S1-208ENST00000515066 SUPT20HL1Q3ZLR7 823 aa19.71■□□□□ 0.75
AP3S1-208ENST00000515066 TMEM179Q6ZVK1 233 aa19.71■□□□□ 0.75
AP3S1-208ENST00000515066 TMTC2Q8N394 836 aa19.71■□□□□ 0.75
AP3S1-208ENST00000515066 HOOK2Q96ED9 719 aa19.71■□□□□ 0.75
AP3S1-208ENST00000515066 MYL10Q9BUA6 226 aa19.71■□□□□ 0.75
AP3S1-208ENST00000515066 NID2Q14112 1375 aa19.7■□□□□ 0.74
AP3S1-208ENST00000515066 STK3Q13188 491 aa19.7■□□□□ 0.74
AP3S1-208ENST00000515066 SEPT2Q15019 361 aa19.7■□□□□ 0.74
AP3S1-208ENST00000515066 CCDC178Q5BJE1 867 aa19.7■□□□□ 0.74
AP3S1-208ENST00000515066 DCAF15Q66K64 600 aa19.7■□□□□ 0.74
AP3S1-208ENST00000515066 MAP1SQ66K74 1059 aaPredicted RBP19.7■□□□□ 0.74
AP3S1-208ENST00000515066 CDC37L1Q7L3B6 337 aa19.7■□□□□ 0.74
AP3S1-208ENST00000515066 LDHDQ86WU2 507 aa19.7■□□□□ 0.74
AP3S1-208ENST00000515066 ZNF654Q8IZM8 581 aa19.7■□□□□ 0.74
AP3S1-208ENST00000515066 NECAB1Q8N987 351 aa19.7■□□□□ 0.74
AP3S1-208ENST00000515066 CDCA5Q96FF9 252 aa19.7■□□□□ 0.74
AP3S1-208ENST00000515066 ZNF112Q9UJU3 913 aa19.7■□□□□ 0.74
AP3S1-208ENST00000515066 ZBTB21Q9ULJ3 1066 aa19.7■□□□□ 0.74
AP3S1-208ENST00000515066 STX8Q9UNK0 236 aa19.7■□□□□ 0.74
AP3S1-208ENST00000515066 MYH6P13533 1939 aa19.7■□□□□ 0.74
AP3S1-208ENST00000515066 CCDC69A6NI79 296 aa19.69■□□□□ 0.74
AP3S1-208ENST00000515066 GOLGA8BA8MQT2 603 aa19.69■□□□□ 0.74
AP3S1-208ENST00000515066 PFKFB2O60825 505 aa19.69■□□□□ 0.74
AP3S1-208ENST00000515066 TROAPQ12815 778 aa19.69■□□□□ 0.74
AP3S1-208ENST00000515066 NFXL1Q6ZNB6 911 aa19.69■□□□□ 0.74
AP3S1-208ENST00000515066 RAB11FIP4Q86YS3 637 aa19.69■□□□□ 0.74
AP3S1-208ENST00000515066 SIAH1Q8IUQ4 282 aa19.69■□□□□ 0.74
AP3S1-208ENST00000515066 GTF3C6Q969F1 213 aa19.69■□□□□ 0.74
AP3S1-208ENST00000515066 KLRG1Q96E93 195 aa19.69■□□□□ 0.74
AP3S1-208ENST00000515066 ZNF341Q9BYN7 854 aa19.69■□□□□ 0.74
AP3S1-208ENST00000515066 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.69■□□□□ 0.74
AP3S1-208ENST00000515066 CLEC11AQ9Y240 323 aa19.69■□□□□ 0.74
AP3S1-208ENST00000515066 SLC12A7Q9Y666 1083 aa19.69■□□□□ 0.74
AP3S1-208ENST00000515066 TRPM7Q96QT4 1865 aa19.69■□□□□ 0.74
AP3S1-208ENST00000515066 RXRAP19793 462 aa19.68■□□□□ 0.74
AP3S1-208ENST00000515066 INPP5BP32019 993 aa19.68■□□□□ 0.74
AP3S1-208ENST00000515066 SCRN1Q12765 414 aa19.68■□□□□ 0.74
AP3S1-208ENST00000515066 MICU3Q86XE3 530 aa19.68■□□□□ 0.74
AP3S1-208ENST00000515066 TMEM47Q9BQJ4 181 aa19.68■□□□□ 0.74
AP3S1-208ENST00000515066 PTPRFP10586 1907 aa19.68■□□□□ 0.74
AP3S1-208ENST00000515066 TTLL1O95922 423 aa19.68■□□□□ 0.74
AP3S1-208ENST00000515066 CCDC83Q8IWF9 413 aa19.68■□□□□ 0.74
AP3S1-208ENST00000515066 SLKQ9H2G2 1235 aaPredicted RBP19.68■□□□□ 0.74
AP3S1-208ENST00000515066 KANSL2Q9H9L4 492 aa19.68■□□□□ 0.74
AP3S1-208ENST00000515066 NCOA5Q9HCD5 579 aaKnown RBP19.68■□□□□ 0.74
AP3S1-208ENST00000515066 NAP1L2Q9ULW6 460 aaPredicted RBP19.68■□□□□ 0.74
AP3S1-208ENST00000515066 ZBTB43O43298 467 aa19.67■□□□□ 0.74
AP3S1-208ENST00000515066 CTNND1O60716 968 aaKnown RBP19.67■□□□□ 0.74
AP3S1-208ENST00000515066 USP2O75604 605 aaPredicted RBP19.67■□□□□ 0.74
AP3S1-208ENST00000515066 RCAN1P53805 252 aa19.67■□□□□ 0.74
AP3S1-208ENST00000515066 ICA1Q05084 483 aa19.67■□□□□ 0.74
AP3S1-208ENST00000515066 RAB3GAP1Q15042 981 aa19.67■□□□□ 0.74
AP3S1-208ENST00000515066 PNMA1Q8ND90 353 aa19.67■□□□□ 0.74
AP3S1-208ENST00000515066 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.67■□□□□ 0.74
AP3S1-208ENST00000515066 WRNIP1Q96S55 665 aa19.67■□□□□ 0.74
AP3S1-208ENST00000515066 CABP5Q9NP86 173 aa19.67■□□□□ 0.74
AP3S1-208ENST00000515066 TRAF5O00463 557 aa19.66■□□□□ 0.74
AP3S1-208ENST00000515066 ASNSP08243 561 aa19.66■□□□□ 0.74
AP3S1-208ENST00000515066 TOP1P11387 765 aaKnown RBP19.66■□□□□ 0.74
AP3S1-208ENST00000515066 EEF2P13639 858 aaKnown RBP19.66■□□□□ 0.74
AP3S1-208ENST00000515066 CCT2P78371 535 aaKnown RBP19.66■□□□□ 0.74
AP3S1-208ENST00000515066 FMR1Q06787 632 aaKnown RBP eCLIP19.66■□□□□ 0.74
AP3S1-208ENST00000515066 RASGRP2Q7LDG7 609 aa19.66■□□□□ 0.74
AP3S1-208ENST00000515066 KAT14Q9H8E8 782 aa19.66■□□□□ 0.74
AP3S1-208ENST00000515066 FAM217BQ9NTX9 383 aaPredicted RBP19.66■□□□□ 0.74
AP3S1-208ENST00000515066 NYAP2Q9P242 653 aa19.66■□□□□ 0.74
AP3S1-208ENST00000515066 DDAH1O94760 285 aa19.65■□□□□ 0.74
AP3S1-208ENST00000515066 CDC27P30260 824 aa19.65■□□□□ 0.74
AP3S1-208ENST00000515066 METAP2P50579 478 aaKnown RBP eCLIP19.65■□□□□ 0.74
AP3S1-208ENST00000515066 LRRC47Q8N1G4 583 aaKnown RBP19.65■□□□□ 0.74
AP3S1-208ENST00000515066 SPRYD3Q8NCJ5 442 aa19.65■□□□□ 0.74
AP3S1-208ENST00000515066 MKL1Q969V6 931 aa19.65■□□□□ 0.74
AP3S1-208ENST00000515066 CLIP2Q9UDT6 1046 aa19.65■□□□□ 0.74
AP3S1-208ENST00000515066 DTNBO60941 627 aa19.65■□□□□ 0.74
AP3S1-208ENST00000515066 PRKG1Q13976 671 aa19.65■□□□□ 0.74
AP3S1-208ENST00000515066 CATIPQ7Z7H3 387 aa19.65■□□□□ 0.74
AP3S1-208ENST00000515066 CCDC84Q86UT8 332 aaPredicted RBP19.65■□□□□ 0.74
AP3S1-208ENST00000515066 CCDC144CPQ8IYA2 1237 aa19.65■□□□□ 0.74
AP3S1-208ENST00000515066 ZKSCAN4Q969J2 545 aaPredicted RBP19.65■□□□□ 0.74
AP3S1-208ENST00000515066 INTS4Q96HW7 963 aaKnown RBP19.65■□□□□ 0.74
AP3S1-208ENST00000515066 FOXD4L1Q9NU39 408 aa19.65■□□□□ 0.74
AP3S1-208ENST00000515066 A0A1W2PRG0 241 aa19.64■□□□□ 0.73
AP3S1-208ENST00000515066 GOLGA8AA7E2F4 631 aa19.64■□□□□ 0.73
AP3S1-208ENST00000515066 CTDNEP1O95476 244 aa19.64■□□□□ 0.73
AP3S1-208ENST00000515066 NUP133Q8WUM0 1156 aa19.64■□□□□ 0.73
AP3S1-208ENST00000515066 GINM1Q9NU53 330 aa19.64■□□□□ 0.73
AP3S1-208ENST00000515066 PPP1R12BO60237 982 aaPredicted RBP19.63■□□□□ 0.73
AP3S1-208ENST00000515066 PPP4R3BQ5MIZ7 849 aa19.63■□□□□ 0.73
AP3S1-208ENST00000515066 SYNE3Q6ZMZ3 975 aa19.63■□□□□ 0.73
AP3S1-208ENST00000515066 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.63■□□□□ 0.73
AP3S1-208ENST00000515066 SCYL3Q8IZE3 742 aa19.63■□□□□ 0.73
AP3S1-208ENST00000515066 FANCBQ8NB91 859 aa19.63■□□□□ 0.73
AP3S1-208ENST00000515066 ADD1P35611 737 aaKnown RBP19.62■□□□□ 0.73
AP3S1-208ENST00000515066 ECE1P42892 770 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms