RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 PDE11AQ9HCR9 933 aa14.75□□□□□ -0.05
TCOF1-214ENST00000515035 STK32BQ9NY57 414 aa14.75□□□□□ -0.05
TCOF1-214ENST00000515035 CCT5P48643 541 aa14.75□□□□□ -0.05
TCOF1-214ENST00000515035 KLHL30Q0D2K2 578 aa14.75□□□□□ -0.05
TCOF1-214ENST00000515035 EYA3Q99504 573 aa14.75□□□□□ -0.05
TCOF1-214ENST00000515035 PPP2R2CQ9Y2T4 447 aa14.75□□□□□ -0.05
TCOF1-214ENST00000515035 CFAP74Q9C0B2 1584 aa14.75□□□□□ -0.05
TCOF1-214ENST00000515035 B4E1Z4 1266 aa14.75□□□□□ -0.05
TCOF1-214ENST00000515035 TMEM87BQ96K49 555 aa14.75□□□□□ -0.05
TCOF1-214ENST00000515035 RAB3IPQ96QF0 476 aaPredicted RBP14.75□□□□□ -0.05
TCOF1-214ENST00000515035 BABAM1Q9NWV8 329 aa14.75□□□□□ -0.05
TCOF1-214ENST00000515035 CLTAP09496 248 aa14.74□□□□□ -0.05
TCOF1-214ENST00000515035 CCDC84Q86UT8 332 aaPredicted RBP14.74□□□□□ -0.05
TCOF1-214ENST00000515035 LRRC8AQ8IWT6 810 aa14.74□□□□□ -0.05
TCOF1-214ENST00000515035 HOMER3Q9NSC5 361 aa14.74□□□□□ -0.05
TCOF1-214ENST00000515035 FLOT1O75955 427 aa14.74□□□□□ -0.05
TCOF1-214ENST00000515035 PIK3AP1Q6ZUJ8 805 aa14.74□□□□□ -0.05
TCOF1-214ENST00000515035 SYCE1Q8N0S2 351 aa14.74□□□□□ -0.05
TCOF1-214ENST00000515035 ANKRD2Q9GZV1 360 aa14.74□□□□□ -0.05
TCOF1-214ENST00000515035 RAB17Q9H0T7 212 aa14.74□□□□□ -0.05
TCOF1-214ENST00000515035 VEZTQ9HBM0 779 aa14.74□□□□□ -0.05
TCOF1-214ENST00000515035 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.74□□□□□ -0.058e-6■■□□□ 13.6
TCOF1-214ENST00000515035 USH1CQ9Y6N9 552 aa14.74□□□□□ -0.05
TCOF1-214ENST00000515035 IRS4O14654 1257 aaPredicted RBP14.74□□□□□ -0.05
TCOF1-214ENST00000515035 GSDMBQ8TAX9 411 aa14.74□□□□□ -0.05
TCOF1-214ENST00000515035 CARD14Q9BXL6 1004 aa14.74□□□□□ -0.05
TCOF1-214ENST00000515035 ANGEL1Q9UNK9 670 aaKnown RBP14.74□□□□□ -0.05
TCOF1-214ENST00000515035 PZPP20742 1482 aa14.74□□□□□ -0.05
TCOF1-214ENST00000515035 RASA3Q14644 834 aa14.74□□□□□ -0.05
TCOF1-214ENST00000515035 SNCBQ16143 134 aa14.74□□□□□ -0.05
TCOF1-214ENST00000515035 MRFAP1L1Q96HT8 127 aa14.74□□□□□ -0.05
TCOF1-214ENST00000515035 GNPATO15228 680 aa14.73□□□□□ -0.05
TCOF1-214ENST00000515035 ITIH3Q06033 890 aa14.73□□□□□ -0.05
TCOF1-214ENST00000515035 JDP2Q8WYK2 163 aa14.73□□□□□ -0.05
TCOF1-214ENST00000515035 SPATS2LQ9NUQ6 558 aaKnown RBP14.73□□□□□ -0.05
TCOF1-214ENST00000515035 TPX2Q9ULW0 747 aaKnown RBP14.73□□□□□ -0.05
TCOF1-214ENST00000515035 JAK2O60674 1132 aa14.73□□□□□ -0.05
TCOF1-214ENST00000515035 TRIM58Q8NG06 486 aa14.73□□□□□ -0.05
TCOF1-214ENST00000515035 PFDN4Q9NQP4 134 aa14.73□□□□□ -0.05
TCOF1-214ENST00000515035 KIAA1468Q9P260 1216 aa14.73□□□□□ -0.05
TCOF1-214ENST00000515035 PYCARDQ9ULZ3 195 aa14.73□□□□□ -0.05
TCOF1-214ENST00000515035 GAS8O95995 478 aa14.73□□□□□ -0.05
TCOF1-214ENST00000515035 BIRC3Q13489 604 aa14.73□□□□□ -0.05
TCOF1-214ENST00000515035 RBBP5Q15291 538 aaKnown RBP14.73□□□□□ -0.05
TCOF1-214ENST00000515035 TYW1BQ6NUM6 668 aa14.73□□□□□ -0.05
TCOF1-214ENST00000515035 NELFBQ8WX92 580 aa14.73□□□□□ -0.05
TCOF1-214ENST00000515035 CCNL1Q9UK58 526 aaPredicted RBP14.73□□□□□ -0.05
TCOF1-214ENST00000515035 TROVE2P10155 538 aaKnown RBP eCLIP14.73□□□□□ -0.05
TCOF1-214ENST00000515035 TTC38Q5R3I4 469 aa14.73□□□□□ -0.05
TCOF1-214ENST00000515035 CCT6BQ92526 530 aa14.73□□□□□ -0.05
TCOF1-214ENST00000515035 MPHOSPH6Q99547 160 aaKnown RBP14.73□□□□□ -0.05
TCOF1-214ENST00000515035 FRMD3A2A2Y4 597 aa14.72□□□□□ -0.05
TCOF1-214ENST00000515035 TTC36A6NLP5 189 aa14.72□□□□□ -0.05
TCOF1-214ENST00000515035 STX10O60499 249 aa14.72□□□□□ -0.05
TCOF1-214ENST00000515035 PICALMQ13492 652 aa14.72□□□□□ -0.05
TCOF1-214ENST00000515035 RASIP1Q5U651 963 aa14.72□□□□□ -0.05
TCOF1-214ENST00000515035 OR8K1Q8NGG5 319 aa14.72□□□□□ -0.05
TCOF1-214ENST00000515035 DDX27Q96GQ7 796 aaKnown RBP14.72□□□□□ -0.05
TCOF1-214ENST00000515035 FAM227BQ96M60 508 aa14.72□□□□□ -0.05
TCOF1-214ENST00000515035 OPHN1O60890 802 aa14.72□□□□□ -0.05
TCOF1-214ENST00000515035 LUC7L3O95232 432 aaKnown RBP14.72□□□□□ -0.05
TCOF1-214ENST00000515035 WDR44Q5JSH3 913 aa14.72□□□□□ -0.05
TCOF1-214ENST00000515035 RILPQ96NA2 401 aa14.72□□□□□ -0.05
TCOF1-214ENST00000515035 FAM207AQ9NSI2 230 aaPredicted RBP14.72□□□□□ -0.05
TCOF1-214ENST00000515035 AOX1Q06278 1338 aa14.72□□□□□ -0.05
TCOF1-214ENST00000515035 COG7P83436 770 aa14.72□□□□□ -0.05
TCOF1-214ENST00000515035 PARP10Q53GL7 1025 aa14.72□□□□□ -0.05
TCOF1-214ENST00000515035 LGSNQ5TDP6 509 aa14.72□□□□□ -0.05
TCOF1-214ENST00000515035 SFMBT2Q5VUG0 894 aa14.72□□□□□ -0.05
TCOF1-214ENST00000515035 KRT40Q6A162 431 aa14.72□□□□□ -0.05
TCOF1-214ENST00000515035 RABGGTAQ92696 567 aa14.72□□□□□ -0.05
TCOF1-214ENST00000515035 BLMP54132 1417 aaPredicted RBP14.72□□□□□ -0.05
TCOF1-214ENST00000515035 MBD4O95243 580 aa14.71□□□□□ -0.05
TCOF1-214ENST00000515035 MYCNP04198 464 aaPredicted RBP14.71□□□□□ -0.05
TCOF1-214ENST00000515035 PLCG2P16885 1265 aa14.71□□□□□ -0.05
TCOF1-214ENST00000515035 PNOCQ13519 176 aa14.71□□□□□ -0.05
TCOF1-214ENST00000515035 TMCO4Q5TGY1 634 aa14.71□□□□□ -0.05
TCOF1-214ENST00000515035 LIN9Q5TKA1 542 aa14.71□□□□□ -0.05
TCOF1-214ENST00000515035 CERS3Q8IU89 383 aa14.71□□□□□ -0.05
TCOF1-214ENST00000515035 BICC1Q9H694 974 aaKnown RBP14.71□□□□□ -0.05
TCOF1-214ENST00000515035 PARP2Q9UGN5 583 aa14.71□□□□□ -0.05
TCOF1-214ENST00000515035 V9GY48 417 aaPredicted RBP14.71□□□□□ -0.05
TCOF1-214ENST00000515035 CRCPO75575 148 aa14.71□□□□□ -0.05
TCOF1-214ENST00000515035 RRAGAQ7L523 313 aa14.71□□□□□ -0.05
TCOF1-214ENST00000515035 C2CD5Q86YS7 1000 aa14.71□□□□□ -0.05
TCOF1-214ENST00000515035 KIFC2Q96AC6 838 aa14.71□□□□□ -0.05
TCOF1-214ENST00000515035 HYOU1Q9Y4L1 999 aa14.71□□□□□ -0.05
TCOF1-214ENST00000515035 LRRD1A4D1F6 860 aa14.71□□□□□ -0.05
TCOF1-214ENST00000515035 NAP1L4Q99733 375 aaKnown RBP14.71□□□□□ -0.05
TCOF1-214ENST00000515035 VCX3AQ9NNX9 186 aa14.71□□□□□ -0.05
TCOF1-214ENST00000515035 ZBTB21Q9ULJ3 1066 aa14.71□□□□□ -0.05
TCOF1-214ENST00000515035 NSFL1CQ9UNZ2 370 aaKnown RBP14.71□□□□□ -0.05
TCOF1-214ENST00000515035 NR1I2O75469 434 aa14.71□□□□□ -0.06
TCOF1-214ENST00000515035 EFCAB13Q8IY85 973 aa14.71□□□□□ -0.06
TCOF1-214ENST00000515035 HELBQ8NG08 1087 aaPredicted RBP14.71□□□□□ -0.06
TCOF1-214ENST00000515035 GPT2Q8TD30 523 aa14.71□□□□□ -0.06
TCOF1-214ENST00000515035 STAMQ92783 540 aa14.71□□□□□ -0.06
TCOF1-214ENST00000515035 TRIM4Q9C037 500 aa14.71□□□□□ -0.06
TCOF1-214ENST00000515035 ATP8B1O43520 1251 aa14.7□□□□□ -0.06
TCOF1-214ENST00000515035 ADALQ6DHV7 355 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms