RNA–Protein interactions for RNA: ENST00000514738.5

CDH6-205, Transcript of cadherin 6, humanhuman

TSL 1 (best) BASIC

Gene CDH6, Length 2,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-205ENST00000514738 ANKK1Q8NFD2 765 aa18.13■□□□□ 0.49
CDH6-205ENST00000514738 SLC7A5P2Q9GIP4 190 aa18.13■□□□□ 0.49
CDH6-205ENST00000514738 PZPP20742 1482 aa18.13■□□□□ 0.49
CDH6-205ENST00000514738 TMF1P82094 1093 aa18.12■□□□□ 0.49
CDH6-205ENST00000514738 SGSM1Q2NKQ1 1148 aa18.12■□□□□ 0.49
CDH6-205ENST00000514738 LACTB2Q53H82 288 aaPredicted RBP18.12■□□□□ 0.49
CDH6-205ENST00000514738 CEP128Q6ZU80 1094 aa18.12■□□□□ 0.49
CDH6-205ENST00000514738 KIFAP3Q92845 792 aa18.12■□□□□ 0.49
CDH6-205ENST00000514738 SYT15Q9BQS2 421 aa18.12■□□□□ 0.49
CDH6-205ENST00000514738 EFR3BQ9Y2G0 817 aa18.12■□□□□ 0.49
CDH6-205ENST00000514738 SH3GLB1Q9Y371 365 aa18.12■□□□□ 0.49
CDH6-205ENST00000514738 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.12■□□□□ 0.49
CDH6-205ENST00000514738 FAM69CQ0P6D2 419 aa18.12■□□□□ 0.49
CDH6-205ENST00000514738 MAATS1Q7Z4T9 603 aa18.12■□□□□ 0.49
CDH6-205ENST00000514738 PALB2Q86YC2 1186 aa18.12■□□□□ 0.49
CDH6-205ENST00000514738 NOA1Q8NC60 698 aaKnown RBP18.12■□□□□ 0.49
CDH6-205ENST00000514738 FGD4Q96M96 766 aa18.12■□□□□ 0.49
CDH6-205ENST00000514738 A0A087WWV3 80 aa18.11■□□□□ 0.49
CDH6-205ENST00000514738 ZBTB7BO15156 539 aaPredicted RBP18.11■□□□□ 0.49
CDH6-205ENST00000514738 AKR1B10O60218 316 aa18.11■□□□□ 0.49
CDH6-205ENST00000514738 FAM107AO95990 144 aa18.11■□□□□ 0.49
CDH6-205ENST00000514738 USP46P62068 366 aa18.11■□□□□ 0.49
CDH6-205ENST00000514738 PPP1R7Q15435 360 aa18.11■□□□□ 0.49
CDH6-205ENST00000514738 WDR78Q5VTH9 848 aa18.11■□□□□ 0.49
CDH6-205ENST00000514738 DDX27Q96GQ7 796 aaKnown RBP18.11■□□□□ 0.49
CDH6-205ENST00000514738 NAF1Q96HR8 494 aaKnown RBP18.11■□□□□ 0.49
CDH6-205ENST00000514738 SPATA32Q96LK8 384 aa18.11■□□□□ 0.49
CDH6-205ENST00000514738 SCAND2PQ9GZW5 306 aaPredicted RBP18.11■□□□□ 0.49
CDH6-205ENST00000514738 ITGB1BP2Q9UKP3 347 aa18.11■□□□□ 0.49
CDH6-205ENST00000514738 PTGISQ16647 500 aa18.11■□□□□ 0.49
CDH6-205ENST00000514738 ANKRD20A2Q5SQ80 823 aa18.11■□□□□ 0.49
CDH6-205ENST00000514738 ZMYM1Q5SVZ6 1142 aa18.11■□□□□ 0.49
CDH6-205ENST00000514738 ANKRD20A1Q5TYW2 823 aa18.11■□□□□ 0.49
CDH6-205ENST00000514738 NUTM2DQ5VT03 806 aaPredicted RBP18.11■□□□□ 0.49
CDH6-205ENST00000514738 ANKRD20A3Q5VUR7 823 aa18.11■□□□□ 0.49
CDH6-205ENST00000514738 ANO7Q6IWH7 933 aa18.11■□□□□ 0.49
CDH6-205ENST00000514738 DDX12PQ92771 950 aa18.11■□□□□ 0.49
CDH6-205ENST00000514738 RUNDC1Q96C34 613 aa18.11■□□□□ 0.49
CDH6-205ENST00000514738 TCHPQ9BT92 498 aa18.11■□□□□ 0.49
CDH6-205ENST00000514738 PNMA2Q9UL42 364 aa18.11■□□□□ 0.49
CDH6-205ENST00000514738 GJB2P29033 226 aa18.1■□□□□ 0.49
CDH6-205ENST00000514738 AKAP17AQ02040 695 aaKnown RBP18.1■□□□□ 0.49
CDH6-205ENST00000514738 KARSQ15046 597 aaKnown RBP18.1■□□□□ 0.49
CDH6-205ENST00000514738 TMEM53Q6P2H8 277 aa18.1■□□□□ 0.49
CDH6-205ENST00000514738 OTUD6AQ7L8S5 288 aa18.1■□□□□ 0.49
CDH6-205ENST00000514738 TRIM50Q86XT4 487 aa18.1■□□□□ 0.49
CDH6-205ENST00000514738 KLHDC4Q8TBB5 520 aa18.1■□□□□ 0.49
CDH6-205ENST00000514738 PPP2R3CQ969Q6 453 aa18.1■□□□□ 0.49
CDH6-205ENST00000514738 TTC14Q96N46 770 aa18.1■□□□□ 0.49
CDH6-205ENST00000514738 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.1■□□□□ 0.49
CDH6-205ENST00000514738 R3HDM2Q9Y2K5 976 aaKnown RBP18.1■□□□□ 0.49
CDH6-205ENST00000514738 TIMM22Q9Y584 194 aa18.1■□□□□ 0.49
CDH6-205ENST00000514738 NOS1P29475 1434 aa18.1■□□□□ 0.49
CDH6-205ENST00000514738 ATP1A2P50993 1020 aa18.1■□□□□ 0.49
CDH6-205ENST00000514738 SEC24CP53992 1094 aa18.1■□□□□ 0.49
CDH6-205ENST00000514738 PIP4K2BP78356 416 aa18.1■□□□□ 0.49
CDH6-205ENST00000514738 EMC10Q5UCC4 262 aa18.1■□□□□ 0.49
CDH6-205ENST00000514738 RNF220Q5VTB9 566 aa18.1■□□□□ 0.49
CDH6-205ENST00000514738 CCDC148Q8NFR7 591 aa18.1■□□□□ 0.49
CDH6-205ENST00000514738 WDR66Q8TBY9 1149 aa18.1■□□□□ 0.49
CDH6-205ENST00000514738 OTUD7AQ8TE49 926 aaPredicted RBP18.1■□□□□ 0.49
CDH6-205ENST00000514738 SH3GL1Q99961 368 aa18.1■□□□□ 0.49
CDH6-205ENST00000514738 EXOC1Q9NV70 894 aa18.1■□□□□ 0.49
CDH6-205ENST00000514738 SMARCA4P51532 1647 aa18.1■□□□□ 0.49
CDH6-205ENST00000514738 TAF11Q15544 211 aa18.09■□□□□ 0.49
CDH6-205ENST00000514738 ALS2CLQ60I27 953 aa18.09■□□□□ 0.49
CDH6-205ENST00000514738 FAM173BQ6P4H8 233 aa18.09■□□□□ 0.49
CDH6-205ENST00000514738 TMEM139Q8IV31 216 aa18.09■□□□□ 0.49
CDH6-205ENST00000514738 ATRIPQ8WXE1 791 aa18.09■□□□□ 0.49
CDH6-205ENST00000514738 CIDEBQ9UHD4 219 aa18.09■□□□□ 0.49
CDH6-205ENST00000514738 DDX25Q9UHL0 483 aaKnown RBP18.09■□□□□ 0.49
CDH6-205ENST00000514738 MAP3K12Q12852 859 aa18.09■□□□□ 0.49
CDH6-205ENST00000514738 ZNF653Q96CK0 615 aa18.09■□□□□ 0.49
CDH6-205ENST00000514738 INIPQ9NRY2 104 aa18.09■□□□□ 0.49
CDH6-205ENST00000514738 GOLGA8AA7E2F4 631 aa18.08■□□□□ 0.49
CDH6-205ENST00000514738 ATP2C2O75185 946 aa18.08■□□□□ 0.49
CDH6-205ENST00000514738 TFRCP02786 760 aaKnown RBP18.08■□□□□ 0.49
CDH6-205ENST00000514738 ARPC4P59998 168 aa18.08■□□□□ 0.49
CDH6-205ENST00000514738 EXOSC9Q06265 439 aaKnown RBP18.08■□□□□ 0.49
CDH6-205ENST00000514738 TCERG1LQ5VWI1 586 aa18.08■□□□□ 0.49
CDH6-205ENST00000514738 TRAPPC9Q96Q05 1148 aa18.08■□□□□ 0.49
CDH6-205ENST00000514738 SELENOOQ9BVL4 669 aa18.08■□□□□ 0.49
CDH6-205ENST00000514738 LMTK2Q8IWU2 1503 aa18.08■□□□□ 0.49
CDH6-205ENST00000514738 BIVM-ERCC5R4GMW8 1640 aa18.08■□□□□ 0.48
CDH6-205ENST00000514738 KIAA0586Q9BVV6 1533 aa18.08■□□□□ 0.48
CDH6-205ENST00000514738 PPP1R37O75864 691 aa18.08■□□□□ 0.48
CDH6-205ENST00000514738 HNRNPCP07910 306 aaKnown RBP eCLIP18.08■□□□□ 0.48
CDH6-205ENST00000514738 TAF7Q15545 349 aaPredicted RBP18.08■□□□□ 0.48
CDH6-205ENST00000514738 TOGARAM2Q6ZUX3 1019 aa18.08■□□□□ 0.48
CDH6-205ENST00000514738 EHBP1Q8NDI1 1231 aa18.08■□□□□ 0.48
CDH6-205ENST00000514738 PPP1R14BQ96C90 147 aa18.08■□□□□ 0.48
CDH6-205ENST00000514738 ABHD8Q96I13 439 aa18.08■□□□□ 0.48
CDH6-205ENST00000514738 SRPK1Q96SB4 655 aaKnown RBP18.08■□□□□ 0.48
CDH6-205ENST00000514738 FTOQ9C0B1 505 aaKnown RBP eCLIP18.08■□□□□ 0.48
CDH6-205ENST00000514738 FLOT1O75955 427 aa18.07■□□□□ 0.48
CDH6-205ENST00000514738 PDGFRBP09619 1106 aa18.07■□□□□ 0.48
CDH6-205ENST00000514738 TROVE2P10155 538 aaKnown RBP eCLIP18.07■□□□□ 0.48
CDH6-205ENST00000514738 GUCY1A3Q02108 690 aa18.07■□□□□ 0.48
CDH6-205ENST00000514738 GOLGA8FQ08AF8 430 aa18.07■□□□□ 0.48
CDH6-205ENST00000514738 GOLGA8DPQ0D2H9 430 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms