RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 PRKAB2O43741 272 aa16.11■□□□□ 0.17
PFDN1-206ENST00000514611 MBD4O95243 580 aa16.11■□□□□ 0.17
PFDN1-206ENST00000514611 HMGCRP04035 888 aa16.11■□□□□ 0.17
PFDN1-206ENST00000514611 ATP5JP18859 108 aa16.11■□□□□ 0.17
PFDN1-206ENST00000514611 VCAM1P19320 739 aa16.11■□□□□ 0.17
PFDN1-206ENST00000514611 CYP2B6P20813 491 aa16.11■□□□□ 0.17
PFDN1-206ENST00000514611 PDE3AQ14432 1141 aa16.11■□□□□ 0.17
PFDN1-206ENST00000514611 Q3C1V9 767 aa16.11■□□□□ 0.17
PFDN1-206ENST00000514611 SLC44A5Q8NCS7 719 aa16.11■□□□□ 0.17
PFDN1-206ENST00000514611 TRIB2Q92519 343 aa16.11■□□□□ 0.17
PFDN1-206ENST00000514611 HAUS7Q99871 368 aa16.11■□□□□ 0.17
PFDN1-206ENST00000514611 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.11■□□□□ 0.17
PFDN1-206ENST00000514611 PLXNB2O15031 1838 aa16.1■□□□□ 0.17
PFDN1-206ENST00000514611 SEPT2Q15019 361 aa16.1■□□□□ 0.17
PFDN1-206ENST00000514611 DPF3Q92784 378 aa16.1■□□□□ 0.17
PFDN1-206ENST00000514611 LRRCC1Q9C099 1032 aa16.1■□□□□ 0.17
PFDN1-206ENST00000514611 KIAA1683Q9H0B3 1180 aa16.1■□□□□ 0.17
PFDN1-206ENST00000514611 CABP5Q9NP86 173 aa16.1■□□□□ 0.17
PFDN1-206ENST00000514611 COLQQ9Y215 455 aaPredicted RBP16.1■□□□□ 0.17
PFDN1-206ENST00000514611 SMIM22K7EJ46 135 aa16.09■□□□□ 0.17
PFDN1-206ENST00000514611 MPHOSPH10O00566 681 aaKnown RBP16.09■□□□□ 0.17
PFDN1-206ENST00000514611 CNMDO75829 334 aa16.09■□□□□ 0.17
PFDN1-206ENST00000514611 TFRCP02786 760 aaKnown RBP16.09■□□□□ 0.17
PFDN1-206ENST00000514611 USP14P54578 494 aa16.09■□□□□ 0.17
PFDN1-206ENST00000514611 GTF3C2Q8WUA4 911 aaPredicted RBP16.09■□□□□ 0.17
PFDN1-206ENST00000514611 SOCS4Q8WXH5 440 aa16.09■□□□□ 0.17
PFDN1-206ENST00000514611 DYNLL2Q96FJ2 89 aa16.09■□□□□ 0.17
PFDN1-206ENST00000514611 DOCK3Q8IZD9 2030 aa16.09■□□□□ 0.17
PFDN1-206ENST00000514611 A0A1W2PRG0 241 aa16.08■□□□□ 0.16
PFDN1-206ENST00000514611 USP17L15C9J2P7 530 aa16.08■□□□□ 0.16
PFDN1-206ENST00000514611 USP17L13C9JLJ4 530 aa16.08■□□□□ 0.16
PFDN1-206ENST00000514611 USP17L11C9JVI0 530 aa16.08■□□□□ 0.16
PFDN1-206ENST00000514611 USP17L18D6R9N7 530 aa16.08■□□□□ 0.16
PFDN1-206ENST00000514611 USP17L22D6RA61 530 aa16.08■□□□□ 0.16
PFDN1-206ENST00000514611 USP17L17D6RBQ6 530 aa16.08■□□□□ 0.16
PFDN1-206ENST00000514611 USP17L19D6RCP7 530 aa16.08■□□□□ 0.16
PFDN1-206ENST00000514611 USP17L20D6RJB6 530 aa16.08■□□□□ 0.16
PFDN1-206ENST00000514611 MAPK4P31152 587 aa16.08■□□□□ 0.16
PFDN1-206ENST00000514611 USP17L24Q0WX57 530 aa16.08■□□□□ 0.16
PFDN1-206ENST00000514611 CATSPERGQ6ZRH7 1159 aa16.08■□□□□ 0.16
PFDN1-206ENST00000514611 GPR142Q7Z601 462 aa16.08■□□□□ 0.16
PFDN1-206ENST00000514611 CLEC10AQ8IUN9 316 aa16.08■□□□□ 0.16
PFDN1-206ENST00000514611 DIS3LQ8TF46 1054 aaKnown RBP16.08■□□□□ 0.16
PFDN1-206ENST00000514611 NUDT12Q9BQG2 462 aa16.08■□□□□ 0.16
PFDN1-206ENST00000514611 HTATIP2Q9BUP3 242 aa16.08■□□□□ 0.16
PFDN1-206ENST00000514611 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.08■□□□□ 0.16
PFDN1-206ENST00000514611 CRISPLD2Q9H0B8 497 aa16.08■□□□□ 0.16
PFDN1-206ENST00000514611 RPAP3Q9H6T3 665 aaPredicted RBP16.08■□□□□ 0.16
PFDN1-206ENST00000514611 CYP2D7A0A087X1C5 515 aa16.07■□□□□ 0.16
PFDN1-206ENST00000514611 TSHZ3Q63HK5 1081 aa16.07■□□□□ 0.16
PFDN1-206ENST00000514611 CHRDL2Q6WN34 429 aa16.07■□□□□ 0.16
PFDN1-206ENST00000514611 RPTORQ8N122 1335 aa16.06■□□□□ 0.16
PFDN1-206ENST00000514611 SPDYE16A6NNV3 312 aaPredicted RBP16.06■□□□□ 0.16
PFDN1-206ENST00000514611 PRKAR2AP13861 404 aaKnown RBP16.06■□□□□ 0.16
PFDN1-206ENST00000514611 AKR1B1P15121 316 aa16.06■□□□□ 0.16
PFDN1-206ENST00000514611 UBE3CQ15386 1083 aa16.06■□□□□ 0.16
PFDN1-206ENST00000514611 CCL14Q16627 93 aa16.06■□□□□ 0.16
PFDN1-206ENST00000514611 MORN1Q5T089 497 aa16.06■□□□□ 0.16
PFDN1-206ENST00000514611 PLEKHH3Q7Z736 793 aa16.06■□□□□ 0.16
PFDN1-206ENST00000514611 CCAR1Q8IX12 1150 aaKnown RBP16.06■□□□□ 0.16
PFDN1-206ENST00000514611 USP6NLQ92738 828 aa16.06■□□□□ 0.16
PFDN1-206ENST00000514611 PAWRQ96IZ0 340 aaKnown RBP16.06■□□□□ 0.16
PFDN1-206ENST00000514611 PUS7LQ9H0K6 701 aaKnown RBP16.06■□□□□ 0.16
PFDN1-206ENST00000514611 HMX1Q9NP08 348 aaPredicted RBP16.06■□□□□ 0.16
PFDN1-206ENST00000514611 BTBD7Q9P203 1132 aa16.06■□□□□ 0.16
PFDN1-206ENST00000514611 SWAP70Q9UH65 585 aa16.06■□□□□ 0.16
PFDN1-206ENST00000514611 RABGAP1Q9Y3P9 1069 aa16.06■□□□□ 0.16
PFDN1-206ENST00000514611 ZKSCAN1P17029 563 aaPredicted RBP16.05■□□□□ 0.16
PFDN1-206ENST00000514611 FXR1P51114 621 aaKnown RBP eCLIP16.05■□□□□ 0.16
PFDN1-206ENST00000514611 KIAA1755Q5JYT7 1200 aa16.05■□□□□ 0.16
PFDN1-206ENST00000514611 MAP3K21Q5TCX8 1036 aa16.05■□□□□ 0.16
PFDN1-206ENST00000514611 WDR78Q5VTH9 848 aa16.05■□□□□ 0.16
PFDN1-206ENST00000514611 TMEM179Q6ZVK1 233 aa16.05■□□□□ 0.16
PFDN1-206ENST00000514611 APBA2Q99767 749 aa16.05■□□□□ 0.16
PFDN1-206ENST00000514611 CWC22Q9HCG8 908 aaKnown RBP16.05■□□□□ 0.16
PFDN1-206ENST00000514611 ATP8A2Q9NTI2 1148 aa16.05■□□□□ 0.16
PFDN1-206ENST00000514611 RANBP2P49792 3224 aaKnown RBP16.05■□□□□ 0.16
PFDN1-206ENST00000514611 XRCC5P13010 732 aaKnown RBP16.04■□□□□ 0.16
PFDN1-206ENST00000514611 RGS2P41220 211 aa16.04■□□□□ 0.16
PFDN1-206ENST00000514611 C12orf60Q5U649 245 aa16.04■□□□□ 0.16
PFDN1-206ENST00000514611 LBX2Q6XYB7 198 aa16.04■□□□□ 0.16
PFDN1-206ENST00000514611 ECHDC1Q9NTX5 307 aa16.04■□□□□ 0.16
PFDN1-206ENST00000514611 SLC4A4Q9Y6R1 1079 aa16.04■□□□□ 0.16
PFDN1-206ENST00000514611 USP17L12C9JPN9 530 aa16.03■□□□□ 0.16
PFDN1-206ENST00000514611 USP17L21D6R901 530 aa16.03■□□□□ 0.16
PFDN1-206ENST00000514611 MNX1P50219 401 aaPredicted RBP16.03■□□□□ 0.16
PFDN1-206ENST00000514611 CCNA1P78396 465 aa16.03■□□□□ 0.16
PFDN1-206ENST00000514611 ICA1Q05084 483 aa16.03■□□□□ 0.16
PFDN1-206ENST00000514611 CACNB2Q08289 660 aaPredicted RBP16.03■□□□□ 0.16
PFDN1-206ENST00000514611 TANGO6Q9C0B7 1094 aa16.03■□□□□ 0.16
PFDN1-206ENST00000514611 DCTPP1Q9H773 170 aa16.03■□□□□ 0.16
PFDN1-206ENST00000514611 RBM27Q9P2N5 1060 aaKnown RBP16.03■□□□□ 0.16
PFDN1-206ENST00000514611 SZT2Q5T011 3432 aa16.02■□□□□ 0.16
PFDN1-206ENST00000514611 BAZ2AQ9UIF9 1905 aaKnown RBP16.02■□□□□ 0.16
PFDN1-206ENST00000514611 CCND3P30281 292 aaPredicted RBP16.02■□□□□ 0.16
PFDN1-206ENST00000514611 CDK8P49336 464 aa16.02■□□□□ 0.16
PFDN1-206ENST00000514611 MAP2K5Q13163 448 aa16.02■□□□□ 0.16
PFDN1-206ENST00000514611 ZSCAN25Q6NSZ9 544 aa16.02■□□□□ 0.16
PFDN1-206ENST00000514611 CTR9Q6PD62 1173 aa16.02■□□□□ 0.16
PFDN1-206ENST00000514611 C16orf86Q6ZW13 317 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms