RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-223ENST00000514402 CDH24Q86UP0 819 aa7.19□□□□□ -1.26
MATR3-223ENST00000514402 EHMT1Q9H9B1 1298 aa7.19□□□□□ -1.26
MATR3-223ENST00000514402 ADAMTS1Q9UHI8 967 aa7.19□□□□□ -1.26
MATR3-223ENST00000514402 ST14Q9Y5Y6 855 aa7.19□□□□□ -1.26
MATR3-223ENST00000514402 PRR33A8MZF0 331 aa7.18□□□□□ -1.26
MATR3-223ENST00000514402 SCAMP3O14828 347 aaKnown RBP7.18□□□□□ -1.26
MATR3-223ENST00000514402 GRIN3BO60391 1043 aa7.18□□□□□ -1.26
MATR3-223ENST00000514402 ITGB5P18084 799 aa7.18□□□□□ -1.26
MATR3-223ENST00000514402 FBXO27Q8NI29 283 aa7.18□□□□□ -1.26
MATR3-223ENST00000514402 PI4K2BQ8TCG2 481 aa7.18□□□□□ -1.26
MATR3-223ENST00000514402 PPP1R13LQ8WUF5 828 aa7.18□□□□□ -1.26
MATR3-223ENST00000514402 RNF141Q8WVD5 230 aa7.18□□□□□ -1.26
MATR3-223ENST00000514402 RNF34Q969K3 372 aa7.18□□□□□ -1.26
MATR3-223ENST00000514402 CCDC74BQ96LY2 380 aa7.18□□□□□ -1.26
MATR3-223ENST00000514402 SEMA3GQ9NS98 782 aa7.18□□□□□ -1.26
MATR3-223ENST00000514402 BTBD11A6QL63 1104 aa7.17□□□□□ -1.26
MATR3-223ENST00000514402 UPK3BL1B0FP48 263 aa7.17□□□□□ -1.26
MATR3-223ENST00000514402 UPK3BL2E5RIL1 263 aa7.17□□□□□ -1.26
MATR3-223ENST00000514402 BIN1O00499 593 aa7.17□□□□□ -1.26
MATR3-223ENST00000514402 CBX7O95931 251 aa7.17□□□□□ -1.26
MATR3-223ENST00000514402 RECKO95980 971 aa7.17□□□□□ -1.26
MATR3-223ENST00000514402 ZNF165P49910 485 aa7.17□□□□□ -1.26
MATR3-223ENST00000514402 APOBRQ0VD83 1088 aa7.17□□□□□ -1.26
MATR3-223ENST00000514402 IKZF1Q13422 519 aa7.17□□□□□ -1.26
MATR3-223ENST00000514402 USP48Q86UV5 1035 aa7.17□□□□□ -1.26
MATR3-223ENST00000514402 KIAA0825Q8IV33 1275 aa7.17□□□□□ -1.26
MATR3-223ENST00000514402 SLITRK4Q8IW52 837 aa7.17□□□□□ -1.26
MATR3-223ENST00000514402 HSPA12BQ96MM6 686 aa7.17□□□□□ -1.26
MATR3-223ENST00000514402 SPON2Q9BUD6 331 aa7.17□□□□□ -1.26
MATR3-223ENST00000514402 BRMS1Q9HCU9 246 aa7.17□□□□□ -1.26
MATR3-223ENST00000514402 GMIPQ9P107 970 aa7.17□□□□□ -1.26
MATR3-223ENST00000514402 KLHL3Q9UH77 587 aa7.17□□□□□ -1.26
MATR3-223ENST00000514402 KCNH3Q9ULD8 1083 aa7.17□□□□□ -1.26
MATR3-223ENST00000514402 CNTNAP4Q9C0A0 1308 aa7.17□□□□□ -1.26
MATR3-223ENST00000514402 TLR3O15455 904 aaKnown RBP7.16□□□□□ -1.26
MATR3-223ENST00000514402 CRKP46108 304 aa7.16□□□□□ -1.26
MATR3-223ENST00000514402 TNK2Q07912 1038 aa7.16□□□□□ -1.26
MATR3-223ENST00000514402 LRRFIP1Q32MZ4 808 aaKnown RBP7.16□□□□□ -1.26
MATR3-223ENST00000514402 TMPRSS7Q7RTY8 843 aa7.16□□□□□ -1.26
MATR3-223ENST00000514402 ATG4DQ86TL0 474 aaPredicted RBP7.16□□□□□ -1.26
MATR3-223ENST00000514402 ASPNQ9BXN1 380 aa7.16□□□□□ -1.26
MATR3-223ENST00000514402 TRIT1Q9H3H1 467 aaKnown RBP7.16□□□□□ -1.26
MATR3-223ENST00000514402 PCDHB14Q9Y5E9 798 aa7.16□□□□□ -1.26
MATR3-223ENST00000514402 CHURC1-FNTBB4DL54 471 aa7.15□□□□□ -1.26
MATR3-223ENST00000514402 RNASE1P07998 156 aaKnown RBP7.15□□□□□ -1.26
MATR3-223ENST00000514402 CD96P40200 585 aa7.15□□□□□ -1.26
MATR3-223ENST00000514402 CCNFP41002 786 aa7.15□□□□□ -1.26
MATR3-223ENST00000514402 ZP2Q05996 745 aa7.15□□□□□ -1.26
MATR3-223ENST00000514402 CDKAL1Q5VV42 579 aa7.15□□□□□ -1.26
MATR3-223ENST00000514402 CDCP2Q5VXM1 449 aa7.15□□□□□ -1.26
MATR3-223ENST00000514402 PHACTR4Q8IZ21 702 aa7.15□□□□□ -1.26
MATR3-223ENST00000514402 NKD1Q969G9 470 aa7.15□□□□□ -1.26
MATR3-223ENST00000514402 ASIC4Q96FT7 647 aa7.15□□□□□ -1.26
MATR3-223ENST00000514402 CCDC120Q96HB5 630 aa7.15□□□□□ -1.26
MATR3-223ENST00000514402 FMNL2Q96PY5 1086 aa7.15□□□□□ -1.26
MATR3-223ENST00000514402 RC3H2Q9HBD1 1191 aaKnown RBP7.15□□□□□ -1.26
MATR3-223ENST00000514402 MBNL3Q9NUK0 354 aaKnown RBP7.15□□□□□ -1.26
MATR3-223ENST00000514402 UBP1Q9NZI7 540 aa7.15□□□□□ -1.26
MATR3-223ENST00000514402 SLC22A31A6NKX4 558 aa7.14□□□□□ -1.27
MATR3-223ENST00000514402 MEIS3P2A8K0S8 358 aa7.14□□□□□ -1.27
MATR3-223ENST00000514402 H3BS24 57 aa7.14□□□□□ -1.27
MATR3-223ENST00000514402 RGS13O14921 159 aa7.14□□□□□ -1.27
MATR3-223ENST00000514402 TNNI2P48788 182 aa7.14□□□□□ -1.27
MATR3-223ENST00000514402 RGS22Q8NE09 1264 aa7.14□□□□□ -1.27
MATR3-223ENST00000514402 Q96M66 194 aa7.14□□□□□ -1.27
MATR3-223ENST00000514402 GPR62Q9BZJ7 368 aa7.14□□□□□ -1.27
MATR3-223ENST00000514402 DNAJA2O60884 412 aa7.13□□□□□ -1.27
MATR3-223ENST00000514402 SRFP11831 508 aa7.13□□□□□ -1.27
MATR3-223ENST00000514402 IMPDH2P12268 514 aa7.13□□□□□ -1.27
MATR3-223ENST00000514402 CHMP4BP1P59074 171 aa7.13□□□□□ -1.27
MATR3-223ENST00000514402 RAD51AP2Q09MP3 1159 aa7.13□□□□□ -1.27
MATR3-223ENST00000514402 SEZ6Q53EL9 994 aa7.13□□□□□ -1.27
MATR3-223ENST00000514402 DTWD2Q8NBA8 298 aa7.13□□□□□ -1.27
MATR3-223ENST00000514402 FLAD1Q8NFF5 587 aa7.13□□□□□ -1.27
MATR3-223ENST00000514402 MRRFQ96E11 262 aaKnown RBP7.13□□□□□ -1.27
MATR3-223ENST00000514402 EAF1Q96JC9 268 aaPredicted RBP7.13□□□□□ -1.27
MATR3-223ENST00000514402 SPATA32Q96LK8 384 aa7.13□□□□□ -1.27
MATR3-223ENST00000514402 KREMEN1Q96MU8 473 aa7.13□□□□□ -1.27
MATR3-223ENST00000514402 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.13□□□□□ -1.27
MATR3-223ENST00000514402 ATP13A1Q9HD20 1204 aa7.13□□□□□ -1.27
MATR3-223ENST00000514402 ADAMTS6Q9UKP5 1117 aa7.13□□□□□ -1.27
MATR3-223ENST00000514402 CCDC9Q9Y3X0 531 aaKnown RBP7.13□□□□□ -1.27
MATR3-223ENST00000514402 RAG1P15918 1043 aa7.12□□□□□ -1.27
MATR3-223ENST00000514402 GBP1P32455 592 aa7.12□□□□□ -1.27
MATR3-223ENST00000514402 RNF4P78317 190 aa7.12□□□□□ -1.27
MATR3-223ENST00000514402 BAHD1Q8TBE0 780 aaPredicted RBP7.12□□□□□ -1.27
MATR3-223ENST00000514402 UBE2FQ969M7 185 aa7.12□□□□□ -1.27
MATR3-223ENST00000514402 CNNM2Q9H8M5 875 aa7.12□□□□□ -1.27
MATR3-223ENST00000514402 GPATCH2Q9NW75 528 aa7.12□□□□□ -1.27
MATR3-223ENST00000514402 DDX41Q9UJV9 622 aaKnown RBP7.12□□□□□ -1.27
MATR3-223ENST00000514402 PAPLNO95428 1278 aa7.11□□□□□ -1.27
MATR3-223ENST00000514402 MCM4P33991 863 aa7.11□□□□□ -1.27
MATR3-223ENST00000514402 TXKP42681 527 aa7.11□□□□□ -1.27
MATR3-223ENST00000514402 COL9A2Q14055 689 aaPredicted RBP7.11□□□□□ -1.27
MATR3-223ENST00000514402 ZNF394Q53GI3 561 aa7.11□□□□□ -1.27
MATR3-223ENST00000514402 ARSHQ5FYA8 562 aa7.11□□□□□ -1.27
MATR3-223ENST00000514402 OVOS1Q6IE37 1185 aa7.11□□□□□ -1.27
MATR3-223ENST00000514402 ZNF654Q8IZM8 581 aa7.11□□□□□ -1.27
MATR3-223ENST00000514402 LRRN4CLQ8ND94 238 aa7.11□□□□□ -1.27
MATR3-223ENST00000514402 TMEM40Q8WWA1 233 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms