RNA–Protein interactions for RNA: ENST00000514231.1

PDE4D-221, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-221ENST00000514231 REV1Q9UBZ9 1251 aa9.07□□□□□ -0.96
PDE4D-221ENST00000514231 BIN1O00499 593 aa9.06□□□□□ -0.96
PDE4D-221ENST00000514231 HTR3BO95264 441 aa9.06□□□□□ -0.96
PDE4D-221ENST00000514231 CWF19L2Q2TBE0 894 aaKnown RBP9.06□□□□□ -0.96
PDE4D-221ENST00000514231 CDKAL1Q5VV42 579 aa9.06□□□□□ -0.96
PDE4D-221ENST00000514231 THAP5Q7Z6K1 395 aa9.06□□□□□ -0.96
PDE4D-221ENST00000514231 FBXO27Q8NI29 283 aa9.06□□□□□ -0.96
PDE4D-221ENST00000514231 PIWIL2Q8TC59 973 aaKnown RBP9.06□□□□□ -0.96
PDE4D-221ENST00000514231 CYB5D2Q8WUJ1 264 aa9.06□□□□□ -0.96
PDE4D-221ENST00000514231 ASIC4Q96FT7 647 aa9.06□□□□□ -0.96
PDE4D-221ENST00000514231 ADAMTS6Q9UKP5 1117 aa9.06□□□□□ -0.96
PDE4D-221ENST00000514231 GRIN3BO60391 1043 aa9.05□□□□□ -0.96
PDE4D-221ENST00000514231 ZP2Q05996 745 aa9.05□□□□□ -0.96
PDE4D-221ENST00000514231 ATG4DQ86TL0 474 aaPredicted RBP9.05□□□□□ -0.96
PDE4D-221ENST00000514231 BACH2Q9BYV9 841 aa9.05□□□□□ -0.96
PDE4D-221ENST00000514231 RNF114Q9Y508 228 aa9.05□□□□□ -0.96
PDE4D-221ENST00000514231 TXKP42681 527 aa9.04□□□□□ -0.96
PDE4D-221ENST00000514231 TNK2Q07912 1038 aa9.04□□□□□ -0.96
PDE4D-221ENST00000514231 RC3H2Q9HBD1 1191 aaKnown RBP9.04□□□□□ -0.96
PDE4D-221ENST00000514231 CHURC1-FNTBB4DL54 471 aa9.03□□□□□ -0.96
PDE4D-221ENST00000514231 H3BS24 57 aa9.03□□□□□ -0.96
PDE4D-221ENST00000514231 ATE1O95260 518 aa9.03□□□□□ -0.96
PDE4D-221ENST00000514231 CCDC74BQ96LY2 380 aa9.03□□□□□ -0.96
PDE4D-221ENST00000514231 ATP13A1Q9HD20 1204 aa9.03□□□□□ -0.96
PDE4D-221ENST00000514231 ADAMTS1Q9UHI8 967 aa9.03□□□□□ -0.96
PDE4D-221ENST00000514231 TLR3O15455 904 aaKnown RBP9.02□□□□□ -0.97
PDE4D-221ENST00000514231 MLECQ14165 292 aa9.02□□□□□ -0.97
PDE4D-221ENST00000514231 LRRN4CLQ8ND94 238 aa9.02□□□□□ -0.97
PDE4D-221ENST00000514231 UBE2FQ969M7 185 aa9.02□□□□□ -0.97
PDE4D-221ENST00000514231 Q96M66 194 aa9.02□□□□□ -0.97
PDE4D-221ENST00000514231 BRMS1Q9HCU9 246 aa9.02□□□□□ -0.97
PDE4D-221ENST00000514231 PAPLNO95428 1278 aa9.01□□□□□ -0.97
PDE4D-221ENST00000514231 LCE3BQ5TA77 95 aa9.01□□□□□ -0.97
PDE4D-221ENST00000514231 EHMT1Q9H9B1 1298 aa9.01□□□□□ -0.97
PDE4D-221ENST00000514231 PRDM7Q9NQW5 492 aa9.01□□□□□ -0.97
PDE4D-221ENST00000514231 METTL5Q9NRN9 209 aaKnown RBP9.01□□□□□ -0.97
PDE4D-221ENST00000514231 ZSWIM5Q9P217 1185 aa9.01□□□□□ -0.97
PDE4D-221ENST00000514231 KLHL3Q9UH77 587 aa9.01□□□□□ -0.97
PDE4D-221ENST00000514231 SLC22A31A6NKX4 558 aa9□□□□□ -0.97
PDE4D-221ENST00000514231 ZNF76P36508 570 aa9□□□□□ -0.97
PDE4D-221ENST00000514231 TRIM26Q12899 539 aaPredicted RBP9□□□□□ -0.97
PDE4D-221ENST00000514231 REXO1Q8N1G1 1221 aaKnown RBP9□□□□□ -0.97
PDE4D-221ENST00000514231 RNF141Q8WVD5 230 aa9□□□□□ -0.97
PDE4D-221ENST00000514231 NT5C1AQ9BXI3 368 aa9□□□□□ -0.97
PDE4D-221ENST00000514231 KCNH3Q9ULD8 1083 aa9□□□□□ -0.97
PDE4D-221ENST00000514231 PCDHB14Q9Y5E9 798 aa9□□□□□ -0.97
PDE4D-221ENST00000514231 DNAJA2O60884 412 aa8.99□□□□□ -0.97
PDE4D-221ENST00000514231 VAMP1P23763 118 aa8.99□□□□□ -0.97
PDE4D-221ENST00000514231 CRKP46108 304 aa8.99□□□□□ -0.97
PDE4D-221ENST00000514231 TMPRSS7Q7RTY8 843 aa8.99□□□□□ -0.97
PDE4D-221ENST00000514231 BAHD1Q8TBE0 780 aaPredicted RBP8.99□□□□□ -0.97
PDE4D-221ENST00000514231 DUSP15Q9H1R2 295 aaPredicted RBP8.99□□□□□ -0.97
PDE4D-221ENST00000514231 CARS2Q9HA77 564 aaKnown RBP8.99□□□□□ -0.97
PDE4D-221ENST00000514231 UBP1Q9NZI7 540 aa8.99□□□□□ -0.97
PDE4D-221ENST00000514231 RBAK-RBAKDNI3L0D1 243 aa8.98□□□□□ -0.97
PDE4D-221ENST00000514231 TNNI2P48788 182 aa8.98□□□□□ -0.97
PDE4D-221ENST00000514231 FANCCQ00597 558 aa8.98□□□□□ -0.97
PDE4D-221ENST00000514231 PHACTR4Q8IZ21 702 aa8.98□□□□□ -0.97
PDE4D-221ENST00000514231 FLAD1Q8NFF5 587 aa8.98□□□□□ -0.97
PDE4D-221ENST00000514231 GPR62Q9BZJ7 368 aa8.98□□□□□ -0.97
PDE4D-221ENST00000514231 TRIT1Q9H3H1 467 aaKnown RBP8.98□□□□□ -0.97
PDE4D-221ENST00000514231 RGS13O14921 159 aa8.97□□□□□ -0.97
PDE4D-221ENST00000514231 SRFP11831 508 aa8.97□□□□□ -0.97
PDE4D-221ENST00000514231 GBP1P32455 592 aa8.97□□□□□ -0.97
PDE4D-221ENST00000514231 APOBRQ0VD83 1088 aa8.97□□□□□ -0.97
PDE4D-221ENST00000514231 SEZ6Q53EL9 994 aa8.97□□□□□ -0.97
PDE4D-221ENST00000514231 SLITRK4Q8IW52 837 aa8.97□□□□□ -0.97
PDE4D-221ENST00000514231 DTWD2Q8NBA8 298 aa8.97□□□□□ -0.97
PDE4D-221ENST00000514231 VWCEQ96DN2 955 aa8.97□□□□□ -0.97
PDE4D-221ENST00000514231 KREMEN1Q96MU8 473 aa8.97□□□□□ -0.97
PDE4D-221ENST00000514231 KIF2CQ99661 725 aa8.97□□□□□ -0.97
PDE4D-221ENST00000514231 SPON2Q9BUD6 331 aa8.97□□□□□ -0.97
PDE4D-221ENST00000514231 GMIPQ9P107 970 aa8.97□□□□□ -0.97
PDE4D-221ENST00000514231 ZNF165P49910 485 aa8.96□□□□□ -0.98
PDE4D-221ENST00000514231 CDCP2Q5VXM1 449 aa8.96□□□□□ -0.98
PDE4D-221ENST00000514231 KIAA0825Q8IV33 1275 aa8.96□□□□□ -0.98
PDE4D-221ENST00000514231 NKD1Q969G9 470 aa8.96□□□□□ -0.98
PDE4D-221ENST00000514231 CCDC120Q96HB5 630 aa8.96□□□□□ -0.98
PDE4D-221ENST00000514231 EAF1Q96JC9 268 aaPredicted RBP8.96□□□□□ -0.98
PDE4D-221ENST00000514231 ASPNQ9BXN1 380 aa8.96□□□□□ -0.98
PDE4D-221ENST00000514231 GPATCH2Q9NW75 528 aa8.96□□□□□ -0.98
PDE4D-221ENST00000514231 CTNND2Q9UQB3 1225 aa8.96□□□□□ -0.98
PDE4D-221ENST00000514231 CARMIL2Q6F5E8 1435 aa8.96□□□□□ -0.98
PDE4D-221ENST00000514231 BTBD11A6QL63 1104 aa8.95□□□□□ -0.98
PDE4D-221ENST00000514231 ESR1P03372 595 aa8.95□□□□□ -0.98
PDE4D-221ENST00000514231 TPP2P29144 1249 aaPredicted RBP8.95□□□□□ -0.98
PDE4D-221ENST00000514231 CLCQ05315 142 aa8.95□□□□□ -0.98
PDE4D-221ENST00000514231 ARSHQ5FYA8 562 aa8.95□□□□□ -0.98
PDE4D-221ENST00000514231 USP48Q86UV5 1035 aa8.95□□□□□ -0.98
PDE4D-221ENST00000514231 RNF34Q969K3 372 aa8.95□□□□□ -0.98
PDE4D-221ENST00000514231 LRRN2O75325 713 aa8.94□□□□□ -0.98
PDE4D-221ENST00000514231 RAG1P15918 1043 aa8.94□□□□□ -0.98
PDE4D-221ENST00000514231 MCM4P33991 863 aa8.94□□□□□ -0.98
PDE4D-221ENST00000514231 GDNFP39905 211 aa8.94□□□□□ -0.98
PDE4D-221ENST00000514231 GAB4Q2WGN9 574 aa8.94□□□□□ -0.98
PDE4D-221ENST00000514231 LRRFIP1Q32MZ4 808 aaKnown RBP8.94□□□□□ -0.98
PDE4D-221ENST00000514231 GK5Q6ZS86 529 aa8.94□□□□□ -0.98
PDE4D-221ENST00000514231 TMEM40Q8WWA1 233 aa8.94□□□□□ -0.98
PDE4D-221ENST00000514231 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.94□□□□□ -0.98
PDE4D-221ENST00000514231 CNNM2Q9H8M5 875 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms