RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 SLC3A2P08195 630 aaKnown RBP9.78□□□□□ -0.84
NEDD4-210ENST00000513957 TDO2P48775 406 aa9.78□□□□□ -0.84
NEDD4-210ENST00000513957 PDAP1Q13442 181 aaKnown RBP9.78□□□□□ -0.84
NEDD4-210ENST00000513957 CERKLQ49MI3 558 aaPredicted RBP9.78□□□□□ -0.84
NEDD4-210ENST00000513957 MCMDC2Q4G0Z9 681 aa9.78□□□□□ -0.84
NEDD4-210ENST00000513957 SH3D19Q5HYK7 790 aa9.78□□□□□ -0.84
NEDD4-210ENST00000513957 C16orf86Q6ZW13 317 aa9.78□□□□□ -0.84
NEDD4-210ENST00000513957 BRI3BPQ8WY22 251 aa9.78□□□□□ -0.84
NEDD4-210ENST00000513957 RILPL2Q969X0 211 aa9.78□□□□□ -0.84
NEDD4-210ENST00000513957 MFRPQ9BY79 579 aa9.78□□□□□ -0.84
NEDD4-210ENST00000513957 CABP5Q9NP86 173 aa9.78□□□□□ -0.84
NEDD4-210ENST00000513957 RAD50Q92878 1312 aa9.78□□□□□ -0.84
NEDD4-210ENST00000513957 FAM196BA6NMK8 535 aa9.77□□□□□ -0.85
NEDD4-210ENST00000513957 PRKAB2O43741 272 aa9.77□□□□□ -0.85
NEDD4-210ENST00000513957 CHGBP05060 677 aa9.77□□□□□ -0.85
NEDD4-210ENST00000513957 SDSP20132 328 aa9.77□□□□□ -0.85
NEDD4-210ENST00000513957 PDE4AP27815 886 aa9.77□□□□□ -0.85
NEDD4-210ENST00000513957 SHMT1P34896 483 aa9.77□□□□□ -0.85
NEDD4-210ENST00000513957 MNX1P50219 401 aaPredicted RBP9.77□□□□□ -0.85
NEDD4-210ENST00000513957 LBX1P52954 281 aa9.77□□□□□ -0.85
NEDD4-210ENST00000513957 PABPC4Q13310 644 aaKnown RBP eCLIP9.77□□□□□ -0.85
NEDD4-210ENST00000513957 ABCB5Q2M3G0 1257 aa9.77□□□□□ -0.85
NEDD4-210ENST00000513957 SLFNL1Q499Z3 407 aa9.77□□□□□ -0.85
NEDD4-210ENST00000513957 CTR9Q6PD62 1173 aa9.77□□□□□ -0.85
NEDD4-210ENST00000513957 TMEM179Q6ZVK1 233 aa9.77□□□□□ -0.85
NEDD4-210ENST00000513957 IFNL3Q8IZI9 196 aa9.77□□□□□ -0.85
NEDD4-210ENST00000513957 CCDC136Q96JN2 1154 aa9.77□□□□□ -0.85
NEDD4-210ENST00000513957 PARK7Q99497 189 aaKnown RBP9.77□□□□□ -0.85
NEDD4-210ENST00000513957 NAPBQ9H115 298 aa9.77□□□□□ -0.85
NEDD4-210ENST00000513957 ZFYVE28Q9HCC9 887 aa9.77□□□□□ -0.85
NEDD4-210ENST00000513957 DIAPH3Q9NSV4 1193 aa9.77□□□□□ -0.85
NEDD4-210ENST00000513957 PNMA3Q9UL41 463 aa9.77□□□□□ -0.85
NEDD4-210ENST00000513957 CCDC171Q6TFL3 1326 aa9.77□□□□□ -0.85
NEDD4-210ENST00000513957 PARP14Q460N5 1801 aa9.77□□□□□ -0.85
NEDD4-210ENST00000513957 PLIN4Q96Q06 1357 aa9.76□□□□□ -0.85
NEDD4-210ENST00000513957 BTBD19C9JJ37 291 aa9.76□□□□□ -0.85
NEDD4-210ENST00000513957 USP17L10C9JJH3 530 aa9.76□□□□□ -0.85
NEDD4-210ENST00000513957 APPP05067 770 aa9.76□□□□□ -0.85
NEDD4-210ENST00000513957 PCP11498 1178 aaKnown RBP9.76□□□□□ -0.85
NEDD4-210ENST00000513957 USP14P54578 494 aa9.76□□□□□ -0.85
NEDD4-210ENST00000513957 BACE1P56817 501 aa9.76□□□□□ -0.85
NEDD4-210ENST00000513957 TAF1CQ15572 869 aaPredicted RBP9.76□□□□□ -0.85
NEDD4-210ENST00000513957 ALX1Q15699 326 aa9.76□□□□□ -0.85
NEDD4-210ENST00000513957 PPP4R3BQ5MIZ7 849 aa9.76□□□□□ -0.85
NEDD4-210ENST00000513957 RUFY2Q8WXA3 655 aa9.76□□□□□ -0.85
NEDD4-210ENST00000513957 C12orf42Q96LP6 360 aa9.76□□□□□ -0.85
NEDD4-210ENST00000513957 PTPN18Q99952 460 aa9.76□□□□□ -0.85
NEDD4-210ENST00000513957 SH2D4AQ9H788 454 aa9.76□□□□□ -0.85
NEDD4-210ENST00000513957 EPB41L4AQ9HCS5 686 aaPredicted RBP9.76□□□□□ -0.85
NEDD4-210ENST00000513957 SYNPO2Q9UMS6 1093 aa9.76□□□□□ -0.85
NEDD4-210ENST00000513957 AGTPBP1Q9UPW5 1226 aa9.76□□□□□ -0.85
NEDD4-210ENST00000513957 A0A0D9SFI3 127 aa9.75□□□□□ -0.85
NEDD4-210ENST00000513957 A6NJR5 290 aa9.75□□□□□ -0.85
NEDD4-210ENST00000513957 TRIM75PA6NK02 468 aa9.75□□□□□ -0.85
NEDD4-210ENST00000513957 GPR25O00155 361 aa9.75□□□□□ -0.85
NEDD4-210ENST00000513957 TLR2O60603 784 aa9.75□□□□□ -0.85
NEDD4-210ENST00000513957 GDF11O95390 407 aa9.75□□□□□ -0.85
NEDD4-210ENST00000513957 GH2P01242 217 aa9.75□□□□□ -0.85
NEDD4-210ENST00000513957 GSPT1P15170 499 aaKnown RBP9.75□□□□□ -0.85
NEDD4-210ENST00000513957 CDK8P49336 464 aa9.75□□□□□ -0.85
NEDD4-210ENST00000513957 PDE4BQ07343 736 aa9.75□□□□□ -0.85
NEDD4-210ENST00000513957 SPP2Q13103 211 aa9.75□□□□□ -0.85
NEDD4-210ENST00000513957 NMIQ13287 307 aaPredicted RBP9.75□□□□□ -0.85
NEDD4-210ENST00000513957 CRHR2Q13324 411 aa9.75□□□□□ -0.85
NEDD4-210ENST00000513957 MOGSQ13724 837 aa9.75□□□□□ -0.85
NEDD4-210ENST00000513957 RRP1BQ14684 758 aaKnown RBP9.75□□□□□ -0.85
NEDD4-210ENST00000513957 ARHGEF6Q15052 776 aa9.75□□□□□ -0.85
NEDD4-210ENST00000513957 PKN2Q16513 984 aaKnown RBP9.75□□□□□ -0.85
NEDD4-210ENST00000513957 SLC4A8Q2Y0W8 1093 aa9.75□□□□□ -0.85
NEDD4-210ENST00000513957 FAM43AQ8N2R8 423 aa9.75□□□□□ -0.85
NEDD4-210ENST00000513957 KCTD17Q8N5Z5 321 aa9.75□□□□□ -0.85
NEDD4-210ENST00000513957 GTF3C2Q8WUA4 911 aaPredicted RBP9.75□□□□□ -0.85
NEDD4-210ENST00000513957 FAM227BQ96M60 508 aa9.75□□□□□ -0.85
NEDD4-210ENST00000513957 SEC62Q99442 399 aaKnown RBP9.75□□□□□ -0.85
NEDD4-210ENST00000513957 KIAA1683Q9H0B3 1180 aa9.75□□□□□ -0.85
NEDD4-210ENST00000513957 TMOD4Q9NZQ9 345 aa9.75□□□□□ -0.85
NEDD4-210ENST00000513957 ANAPC4Q9UJX5 808 aa9.75□□□□□ -0.85
NEDD4-210ENST00000513957 A0A0G2JMZ2 1700 aa9.74□□□□□ -0.85
NEDD4-210ENST00000513957 PDHXO00330 501 aa9.74□□□□□ -0.85
NEDD4-210ENST00000513957 FKTNO75072 461 aa9.74□□□□□ -0.85
NEDD4-210ENST00000513957 TBC1D8O95759 1140 aa9.74□□□□□ -0.85
NEDD4-210ENST00000513957 SLURP2P0DP57 97 aa9.74□□□□□ -0.85
NEDD4-210ENST00000513957 HOXA7P31268 230 aaPredicted RBP9.74□□□□□ -0.85
NEDD4-210ENST00000513957 BMP2KLQ5H9B9 411 aa9.74□□□□□ -0.85
NEDD4-210ENST00000513957 GPAT2Q6NUI2 795 aa9.74□□□□□ -0.85
NEDD4-210ENST00000513957 USP17L2Q6R6M4 530 aa9.74□□□□□ -0.85
NEDD4-210ENST00000513957 SPDYE1Q8NFV5 336 aaPredicted RBP9.74□□□□□ -0.85
NEDD4-210ENST00000513957 LPAR1Q92633 364 aa9.74□□□□□ -0.85
NEDD4-210ENST00000513957 ERO1AQ96HE7 468 aa9.74□□□□□ -0.85
NEDD4-210ENST00000513957 DSCC1Q9BVC3 393 aa9.74□□□□□ -0.85
NEDD4-210ENST00000513957 KANSL2Q9H9L4 492 aa9.74□□□□□ -0.85
NEDD4-210ENST00000513957 ARHGEF10LQ9HCE6 1279 aa9.74□□□□□ -0.85
NEDD4-210ENST00000513957 ADGRA2Q96PE1 1338 aa9.74□□□□□ -0.85
NEDD4-210ENST00000513957 MINDY4BA8MYZ0 360 aa9.73□□□□□ -0.85
NEDD4-210ENST00000513957 MPHOSPH10O00566 681 aaKnown RBP9.73□□□□□ -0.85
NEDD4-210ENST00000513957 GNRH1P01148 92 aa9.73□□□□□ -0.85
NEDD4-210ENST00000513957 CYP2D6P10635 497 aa9.73□□□□□ -0.85
NEDD4-210ENST00000513957 HSPD1P10809 573 aaKnown RBP9.73□□□□□ -0.85
NEDD4-210ENST00000513957 OSBPP22059 807 aa9.73□□□□□ -0.85
NEDD4-210ENST00000513957 GCLCP48506 637 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms