RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 ERICH6Q7L0X2 663 aa11.14□□□□□ -0.63
CAST-239ENST00000513666 MRPL50Q8N5N7 158 aaKnown RBP11.14□□□□□ -0.63
CAST-239ENST00000513666 PAGR1Q9BTK6 254 aa11.14□□□□□ -0.63
CAST-239ENST00000513666 TMEM265A0A087WTH1 108 aa11.13□□□□□ -0.63
CAST-239ENST00000513666 USP17L10C9JJH3 530 aa11.13□□□□□ -0.63
CAST-239ENST00000513666 TNFRSF10AO00220 468 aa11.13□□□□□ -0.63
CAST-239ENST00000513666 LDHCP07864 332 aa11.13□□□□□ -0.63
CAST-239ENST00000513666 GSTO1P78417 241 aa11.13□□□□□ -0.63
CAST-239ENST00000513666 TJAP1Q5JTD0 557 aa11.13□□□□□ -0.63
CAST-239ENST00000513666 EDC3Q96F86 508 aaKnown RBP11.13□□□□□ -0.63
CAST-239ENST00000513666 FLRT1Q9NZU1 646 aa11.13□□□□□ -0.63
CAST-239ENST00000513666 ATP11BQ9Y2G3 1177 aa11.13□□□□□ -0.63
CAST-239ENST00000513666 GLRX3O76003 335 aaKnown RBP11.12□□□□□ -0.63
CAST-239ENST00000513666 JAG1P78504 1218 aa11.12□□□□□ -0.63
CAST-239ENST00000513666 CWC22Q9HCG8 908 aaKnown RBP11.12□□□□□ -0.63
CAST-239ENST00000513666 PI4KBQ9UBF8 816 aa11.12□□□□□ -0.63
CAST-239ENST00000513666 RABGAP1Q9Y3P9 1069 aa11.12□□□□□ -0.63
CAST-239ENST00000513666 SLC15A5A6NIM6 579 aa11.11□□□□□ -0.63
CAST-239ENST00000513666 HOXC6P09630 235 aa11.11□□□□□ -0.63
CAST-239ENST00000513666 CNGA1P29973 690 aa11.11□□□□□ -0.63
CAST-239ENST00000513666 CCNA1P78396 465 aa11.11□□□□□ -0.63
CAST-239ENST00000513666 SLC39A5Q6ZMH5 540 aa11.11□□□□□ -0.63
CAST-239ENST00000513666 TEX11Q8IYF3 940 aa11.11□□□□□ -0.63
CAST-239ENST00000513666 BADQ92934 168 aa11.11□□□□□ -0.63
CAST-239ENST00000513666 NSUN4Q96CB9 384 aaKnown RBP11.11□□□□□ -0.63
CAST-239ENST00000513666 DHX36Q9H2U1 1008 aaKnown RBP11.11□□□□□ -0.63
CAST-239ENST00000513666 PRDM5Q9NQX1 630 aaPredicted RBP11.11□□□□□ -0.63
CAST-239ENST00000513666 GINM1Q9NU53 330 aa11.11□□□□□ -0.63
CAST-239ENST00000513666 CNMDO75829 334 aa11.1□□□□□ -0.63
CAST-239ENST00000513666 PTPREP23469 700 aa11.1□□□□□ -0.63
CAST-239ENST00000513666 TIMM10P62072 90 aa11.1□□□□□ -0.63
CAST-239ENST00000513666 ATP2B2Q01814 1243 aa11.1□□□□□ -0.63
CAST-239ENST00000513666 SNX17Q15036 470 aa11.1□□□□□ -0.63
CAST-239ENST00000513666 LCE2DQ5TA82 110 aaPredicted RBP11.1□□□□□ -0.63
CAST-239ENST00000513666 METTL16Q86W50 562 aaKnown RBP11.1□□□□□ -0.63
CAST-239ENST00000513666 ARRDC4Q8NCT1 418 aa11.1□□□□□ -0.63
CAST-239ENST00000513666 TRPV1Q8NER1 839 aa11.1□□□□□ -0.63
CAST-239ENST00000513666 DNAJC18Q9H819 358 aa11.1□□□□□ -0.63
CAST-239ENST00000513666 PDLIM7Q9NR12 457 aa11.1□□□□□ -0.63
CAST-239ENST00000513666 EMILIN3Q9NT22 766 aa11.1□□□□□ -0.63
CAST-239ENST00000513666 PA2G4Q9UQ80 394 aaKnown RBP11.1□□□□□ -0.63
CAST-239ENST00000513666 IGHA2P01877 340 aa11.09□□□□□ -0.63
CAST-239ENST00000513666 UBTFL1P0CB47 393 aaPredicted RBP11.09□□□□□ -0.63
CAST-239ENST00000513666 CYBAP13498 195 aa11.09□□□□□ -0.63
CAST-239ENST00000513666 GRB14Q14449 540 aa11.09□□□□□ -0.63
CAST-239ENST00000513666 MVPQ14764 893 aaKnown RBP11.09□□□□□ -0.63
CAST-239ENST00000513666 SHROOM1Q2M3G4 852 aaPredicted RBP11.09□□□□□ -0.63
CAST-239ENST00000513666 GJC2Q5T442 439 aaPredicted RBP11.09□□□□□ -0.63
CAST-239ENST00000513666 USP17L2Q6R6M4 530 aa11.09□□□□□ -0.63
CAST-239ENST00000513666 USP38Q8NB14 1042 aa11.09□□□□□ -0.63
CAST-239ENST00000513666 NPLOC4Q8TAT6 608 aa11.09□□□□□ -0.63
CAST-239ENST00000513666 SH3RF3Q8TEJ3 882 aaPredicted RBP11.09□□□□□ -0.63
CAST-239ENST00000513666 XAGE2Q96GT9 111 aa11.09□□□□□ -0.63
CAST-239ENST00000513666 COPRSQ9NQ92 184 aa11.09□□□□□ -0.63
CAST-239ENST00000513666 HMG20BQ9P0W2 317 aa11.09□□□□□ -0.63
CAST-239ENST00000513666 RAPGEFL1Q9UHV5 662 aa11.09□□□□□ -0.63
CAST-239ENST00000513666 ZBTB21Q9ULJ3 1066 aa11.09□□□□□ -0.63
CAST-239ENST00000513666 NDUFB9Q9Y6M9 179 aa11.09□□□□□ -0.63
CAST-239ENST00000513666 CDH23Q9H251 3354 aa11.09□□□□□ -0.63
CAST-239ENST00000513666 A0A1B0GUL7 405 aa11.09□□□□□ -0.63
CAST-239ENST00000513666 TRIM43BA6NCK2 446 aa11.09□□□□□ -0.63
CAST-239ENST00000513666 KBTBD13C9JR72 458 aa11.09□□□□□ -0.63
CAST-239ENST00000513666 GDF11O95390 407 aa11.09□□□□□ -0.63
CAST-239ENST00000513666 CYP2C19P33261 490 aa11.09□□□□□ -0.63
CAST-239ENST00000513666 PLA2G5P39877 138 aa11.09□□□□□ -0.63
CAST-239ENST00000513666 MUC3AQ02505 3323 aa11.09□□□□□ -0.63
CAST-239ENST00000513666 TRIM60Q495X7 471 aa11.09□□□□□ -0.63
CAST-239ENST00000513666 WDR78Q5VTH9 848 aa11.09□□□□□ -0.63
CAST-239ENST00000513666 TBC1D9Q6ZT07 1266 aa11.09□□□□□ -0.63
CAST-239ENST00000513666 SH3RF1Q7Z6J0 888 aa11.09□□□□□ -0.63
CAST-239ENST00000513666 FOXP4Q8IVH2 680 aaPredicted RBP11.09□□□□□ -0.63
CAST-239ENST00000513666 SPATA5Q8NB90 893 aa11.09□□□□□ -0.63
CAST-239ENST00000513666 TRIM43Q96BQ3 446 aaPredicted RBP11.09□□□□□ -0.63
CAST-239ENST00000513666 C12orf42Q96LP6 360 aa11.09□□□□□ -0.63
CAST-239ENST00000513666 CDK5RAP2Q96SN8 1893 aa11.09□□□□□ -0.63
CAST-239ENST00000513666 MRS2Q9HD23 443 aa11.09□□□□□ -0.63
CAST-239ENST00000513666 RAI14Q9P0K7 980 aa11.09□□□□□ -0.63
CAST-239ENST00000513666 AKAP2Q9Y2D5 859 aa11.09□□□□□ -0.63
CAST-239ENST00000513666 IVNS1ABPQ9Y6Y0 642 aa11.09□□□□□ -0.63
CAST-239ENST00000513666 FOCADQ5VW36 1801 aa11.08□□□□□ -0.64
CAST-239ENST00000513666 USP17L15C9J2P7 530 aa11.08□□□□□ -0.64
CAST-239ENST00000513666 USP17L13C9JLJ4 530 aa11.08□□□□□ -0.64
CAST-239ENST00000513666 USP17L11C9JVI0 530 aa11.08□□□□□ -0.64
CAST-239ENST00000513666 USP17L18D6R9N7 530 aa11.08□□□□□ -0.64
CAST-239ENST00000513666 USP17L22D6RA61 530 aa11.08□□□□□ -0.64
CAST-239ENST00000513666 USP17L17D6RBQ6 530 aa11.08□□□□□ -0.64
CAST-239ENST00000513666 USP17L19D6RCP7 530 aa11.08□□□□□ -0.64
CAST-239ENST00000513666 USP17L20D6RJB6 530 aa11.08□□□□□ -0.64
CAST-239ENST00000513666 USP17L24Q0WX57 530 aa11.08□□□□□ -0.64
CAST-239ENST00000513666 GRIN2CQ14957 1233 aa11.08□□□□□ -0.64
CAST-239ENST00000513666 C1orf53Q5VUE5 145 aa11.08□□□□□ -0.64
CAST-239ENST00000513666 PI16Q6UXB8 463 aa11.08□□□□□ -0.64
CAST-239ENST00000513666 CRACR2BQ8N4Y2 399 aaPredicted RBP11.08□□□□□ -0.64
CAST-239ENST00000513666 SSH1Q8WYL5 1049 aa11.08□□□□□ -0.64
CAST-239ENST00000513666 RNPC3Q96LT9 517 aaKnown RBP11.08□□□□□ -0.64
CAST-239ENST00000513666 NOL10Q9BSC4 688 aaKnown RBP11.08□□□□□ -0.64
CAST-239ENST00000513666 ZNF236Q9UL36 1845 aa11.07□□□□□ -0.64
CAST-239ENST00000513666 TFCP2Q12800 502 aa11.07□□□□□ -0.64
CAST-239ENST00000513666 OLFML2BQ68BL8 750 aa11.07□□□□□ -0.64
CAST-239ENST00000513666 LBX2Q6XYB7 198 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms