RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 UBE2OQ9C0C9 1292 aaKnown RBP11.81□□□□□ -0.52
TCOF1-212ENST00000513538 MTMR10Q9NXD2 777 aa11.81□□□□□ -0.52
TCOF1-212ENST00000513538 IPO8O15397 1037 aaKnown RBP11.8□□□□□ -0.52
TCOF1-212ENST00000513538 CYP7A1P22680 504 aa11.8□□□□□ -0.52
TCOF1-212ENST00000513538 ATP8B2P98198 1209 aa11.8□□□□□ -0.52
TCOF1-212ENST00000513538 MDM2Q00987 491 aaPredicted RBP11.8□□□□□ -0.52
TCOF1-212ENST00000513538 MAP2K5Q13163 448 aa11.8□□□□□ -0.52
TCOF1-212ENST00000513538 TRMT44Q8IYL2 757 aaKnown RBP11.8□□□□□ -0.52
TCOF1-212ENST00000513538 EAF2Q96CJ1 260 aaPredicted RBP11.8□□□□□ -0.52
TCOF1-212ENST00000513538 ANTXR1Q9H6X2 564 aa11.8□□□□□ -0.52
TCOF1-212ENST00000513538 BTBD7Q9P203 1132 aa11.8□□□□□ -0.52
TCOF1-212ENST00000513538 PARP14Q460N5 1801 aa11.8□□□□□ -0.52
TCOF1-212ENST00000513538 ZNF236Q9UL36 1845 aa11.8□□□□□ -0.52
TCOF1-212ENST00000513538 SURF6O75683 361 aaKnown RBP11.79□□□□□ -0.52
TCOF1-212ENST00000513538 IDH1O75874 414 aaKnown RBP11.79□□□□□ -0.52
TCOF1-212ENST00000513538 IGHA2P01877 340 aa11.79□□□□□ -0.52
TCOF1-212ENST00000513538 HLA-DOAP06340 250 aa11.79□□□□□ -0.52
TCOF1-212ENST00000513538 VCAM1P19320 739 aa11.79□□□□□ -0.52
TCOF1-212ENST00000513538 GUCY1A2P33402 732 aa11.79□□□□□ -0.52
TCOF1-212ENST00000513538 SHMT1P34896 483 aa11.79□□□□□ -0.52
TCOF1-212ENST00000513538 OS9Q13438 667 aaPredicted RBP11.79□□□□□ -0.52
TCOF1-212ENST00000513538 MAGEB6Q8N7X4 407 aa11.79□□□□□ -0.52
TCOF1-212ENST00000513538 TRPV1Q8NER1 839 aa11.79□□□□□ -0.52
TCOF1-212ENST00000513538 NPLOC4Q8TAT6 608 aa11.79□□□□□ -0.52
TCOF1-212ENST00000513538 GTF3C2Q8WUA4 911 aaPredicted RBP11.79□□□□□ -0.52
TCOF1-212ENST00000513538 TRIM34Q9BYJ4 488 aa11.79□□□□□ -0.52
TCOF1-212ENST00000513538 CCDC8Q9H0W5 538 aaPredicted RBP11.79□□□□□ -0.52
TCOF1-212ENST00000513538 STXBP5LQ9Y2K9 1186 aa11.79□□□□□ -0.52
TCOF1-212ENST00000513538 NOP58Q9Y2X3 529 aaKnown RBP11.79□□□□□ -0.52
TCOF1-212ENST00000513538 RABGAP1Q9Y3P9 1069 aa11.79□□□□□ -0.52
TCOF1-212ENST00000513538 CUL9Q8IWT3 2517 aa11.79□□□□□ -0.52
TCOF1-212ENST00000513538 SPDYE16A6NNV3 312 aaPredicted RBP11.78□□□□□ -0.52
TCOF1-212ENST00000513538 USP17L15C9J2P7 530 aa11.78□□□□□ -0.52
TCOF1-212ENST00000513538 USP17L13C9JLJ4 530 aa11.78□□□□□ -0.52
TCOF1-212ENST00000513538 USP17L11C9JVI0 530 aa11.78□□□□□ -0.52
TCOF1-212ENST00000513538 USP17L18D6R9N7 530 aa11.78□□□□□ -0.52
TCOF1-212ENST00000513538 USP17L22D6RA61 530 aa11.78□□□□□ -0.52
TCOF1-212ENST00000513538 USP17L17D6RBQ6 530 aa11.78□□□□□ -0.52
TCOF1-212ENST00000513538 USP17L19D6RCP7 530 aa11.78□□□□□ -0.52
TCOF1-212ENST00000513538 USP17L20D6RJB6 530 aa11.78□□□□□ -0.52
TCOF1-212ENST00000513538 RLBP1P12271 317 aa11.78□□□□□ -0.52
TCOF1-212ENST00000513538 PTPREP23469 700 aa11.78□□□□□ -0.52
TCOF1-212ENST00000513538 USP17L24Q0WX57 530 aa11.78□□□□□ -0.52
TCOF1-212ENST00000513538 RAB3GAP1Q15042 981 aa11.78□□□□□ -0.52
TCOF1-212ENST00000513538 LBX2Q6XYB7 198 aa11.78□□□□□ -0.52
TCOF1-212ENST00000513538 CATSPERGQ6ZRH7 1159 aa11.78□□□□□ -0.52
TCOF1-212ENST00000513538 EDC3Q96F86 508 aaKnown RBP11.78□□□□□ -0.52
TCOF1-212ENST00000513538 FEZ1Q99689 392 aa11.78□□□□□ -0.52
TCOF1-212ENST00000513538 RIOK1Q9BRS2 568 aaKnown RBP11.78□□□□□ -0.52
TCOF1-212ENST00000513538 KIAA1683Q9H0B3 1180 aa11.78□□□□□ -0.52
TCOF1-212ENST00000513538 EHD4Q9H223 541 aa11.78□□□□□ -0.52
TCOF1-212ENST00000513538 SERPINB13Q9UIV8 391 aa11.78□□□□□ -0.52
TCOF1-212ENST00000513538 MYH8P13535 1937 aa11.78□□□□□ -0.52
TCOF1-212ENST00000513538 HOXC6P09630 235 aa11.77□□□□□ -0.53
TCOF1-212ENST00000513538 USP5P45974 858 aa11.77□□□□□ -0.53
TCOF1-212ENST00000513538 PLCD1P51178 756 aa11.77□□□□□ -0.53
TCOF1-212ENST00000513538 GRB14Q14449 540 aa11.77□□□□□ -0.53
TCOF1-212ENST00000513538 ABCB5Q2M3G0 1257 aa11.77□□□□□ -0.53
TCOF1-212ENST00000513538 WDR78Q5VTH9 848 aa11.77□□□□□ -0.53
TCOF1-212ENST00000513538 CCAR1Q8IX12 1150 aaKnown RBP11.77□□□□□ -0.53
TCOF1-212ENST00000513538 GUCD1Q96NT3 240 aa11.77□□□□□ -0.53
TCOF1-212ENST00000513538 SENP6Q9GZR1 1112 aaPredicted RBP11.77□□□□□ -0.53
TCOF1-212ENST00000513538 DDX20Q9UHI6 824 aaKnown RBP11.77□□□□□ -0.53
TCOF1-212ENST00000513538 ZNFX1Q9P2E3 1918 aaKnown RBP11.76□□□□□ -0.53
TCOF1-212ENST00000513538 A0A1W2PRG0 241 aa11.76□□□□□ -0.53
TCOF1-212ENST00000513538 SLC15A5A6NIM6 579 aa11.76□□□□□ -0.53
TCOF1-212ENST00000513538 IGSF3O75054 1194 aa11.76□□□□□ -0.53
TCOF1-212ENST00000513538 CYBAP13498 195 aa11.76□□□□□ -0.53
TCOF1-212ENST00000513538 CYP2C19P33261 490 aa11.76□□□□□ -0.53
TCOF1-212ENST00000513538 ATN1P54259 1190 aaPredicted RBP11.76□□□□□ -0.53
TCOF1-212ENST00000513538 GABPAQ06546 454 aa11.76□□□□□ -0.53
TCOF1-212ENST00000513538 CERKLQ49MI3 558 aaPredicted RBP11.76□□□□□ -0.53
TCOF1-212ENST00000513538 MFSD14CQ5VZR4 134 aa11.76□□□□□ -0.53
TCOF1-212ENST00000513538 ZKSCAN2Q63HK3 967 aa11.76□□□□□ -0.53
TCOF1-212ENST00000513538 RPAP3Q9H6T3 665 aaPredicted RBP11.76□□□□□ -0.53
TCOF1-212ENST00000513538 COL11A1P12107 1806 aaPredicted RBP11.76□□□□□ -0.53
TCOF1-212ENST00000513538 BAZ2AQ9UIF9 1905 aaKnown RBP11.76□□□□□ -0.53
TCOF1-212ENST00000513538 POTEB2H3BUK9 544 aa11.75□□□□□ -0.53
TCOF1-212ENST00000513538 CCER2I3L3R5 266 aa11.75□□□□□ -0.53
TCOF1-212ENST00000513538 USP14P54578 494 aa11.75□□□□□ -0.53
TCOF1-212ENST00000513538 CCNA1P78396 465 aa11.75□□□□□ -0.53
TCOF1-212ENST00000513538 SEPT2Q15019 361 aa11.75□□□□□ -0.53
TCOF1-212ENST00000513538 KIAA1755Q5JYT7 1200 aa11.75□□□□□ -0.53
TCOF1-212ENST00000513538 LPAR1Q92633 364 aa11.75□□□□□ -0.53
TCOF1-212ENST00000513538 CWC22Q9HCG8 908 aaKnown RBP11.75□□□□□ -0.53
TCOF1-212ENST00000513538 SMCHD1A6NHR9 2005 aa11.75□□□□□ -0.53
TCOF1-212ENST00000513538 DNAH12Q6ZR08 3092 aa11.74□□□□□ -0.53
TCOF1-212ENST00000513538 DNM1LO00429 736 aa11.74□□□□□ -0.53
TCOF1-212ENST00000513538 RTP1P59025 263 aa11.74□□□□□ -0.53
TCOF1-212ENST00000513538 ANO1Q5XXA6 986 aa11.74□□□□□ -0.53
TCOF1-212ENST00000513538 CEP85Q6P2H3 762 aa11.74□□□□□ -0.53
TCOF1-212ENST00000513538 TTC6Q86TZ1 520 aa11.74□□□□□ -0.53
TCOF1-212ENST00000513538 CLEC10AQ8IUN9 316 aa11.74□□□□□ -0.53
TCOF1-212ENST00000513538 SLC44A5Q8NCS7 719 aa11.74□□□□□ -0.53
TCOF1-212ENST00000513538 MOV10L1Q9BXT6 1211 aaKnown RBP11.74□□□□□ -0.53
TCOF1-212ENST00000513538 EXOC6BQ9Y2D4 811 aa11.74□□□□□ -0.53
TCOF1-212ENST00000513538 A0A0C4DFX4 3053 aa11.74□□□□□ -0.53
TCOF1-212ENST00000513538 SMIM22K7EJ46 135 aa11.73□□□□□ -0.53
TCOF1-212ENST00000513538 COBLO75128 1261 aa11.73□□□□□ -0.53
TCOF1-212ENST00000513538 GLRX3O76003 335 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms