RNA–Protein interactions for RNA: ENST00000513506.5

POLR2J3-218, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-218ENST00000513506 PPP4R3BQ5MIZ7 849 aa18.4■□□□□ 0.54
POLR2J3-218ENST00000513506 PAXIP1Q6ZW49 1069 aaPredicted RBP18.4■□□□□ 0.54
POLR2J3-218ENST00000513506 PROCA1Q8NCQ7 364 aaPredicted RBP18.4■□□□□ 0.54
POLR2J3-218ENST00000513506 BRI3BPQ8WY22 251 aa18.4■□□□□ 0.54
POLR2J3-218ENST00000513506 PTPN18Q99952 460 aa18.4■□□□□ 0.54
POLR2J3-218ENST00000513506 CNNM2Q9H8M5 875 aa18.4■□□□□ 0.54
POLR2J3-218ENST00000513506 INCENPQ9NQS7 918 aa18.4■□□□□ 0.54
POLR2J3-218ENST00000513506 WBP1LQ9NX94 342 aa18.4■□□□□ 0.54
POLR2J3-218ENST00000513506 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.4■□□□□ 0.54
POLR2J3-218ENST00000513506 SLC45A1Q9Y2W3 748 aa18.4■□□□□ 0.54
POLR2J3-218ENST00000513506 GREB1LQ9C091 1923 aaPredicted RBP18.4■□□□□ 0.54
POLR2J3-218ENST00000513506 PHIPQ8WWQ0 1821 aa18.39■□□□□ 0.54
POLR2J3-218ENST00000513506 USP17L10C9JJH3 530 aa18.39■□□□□ 0.53
POLR2J3-218ENST00000513506 PRDM1O75626 825 aa18.39■□□□□ 0.53
POLR2J3-218ENST00000513506 FASTKD5Q7L8L6 764 aaKnown RBP18.39■□□□□ 0.53
POLR2J3-218ENST00000513506 MTMR4Q9NYA4 1195 aa18.39■□□□□ 0.53
POLR2J3-218ENST00000513506 TMX2Q9Y320 296 aa18.39■□□□□ 0.53
POLR2J3-218ENST00000513506 LAMA4Q16363 1823 aa18.39■□□□□ 0.53
POLR2J3-218ENST00000513506 A0A1W2PRG0 241 aa18.38■□□□□ 0.53
POLR2J3-218ENST00000513506 TFAP4Q01664 338 aa18.38■□□□□ 0.53
POLR2J3-218ENST00000513506 RAB3GAP1Q15042 981 aa18.38■□□□□ 0.53
POLR2J3-218ENST00000513506 GPAT2Q6NUI2 795 aa18.38■□□□□ 0.53
POLR2J3-218ENST00000513506 ANKRD23Q86SG2 305 aa18.38■□□□□ 0.53
POLR2J3-218ENST00000513506 CCDC84Q86UT8 332 aaPredicted RBP18.38■□□□□ 0.53
POLR2J3-218ENST00000513506 IFNL1Q8IU54 200 aa18.38■□□□□ 0.53
POLR2J3-218ENST00000513506 ESR2Q92731 530 aa18.38■□□□□ 0.53
POLR2J3-218ENST00000513506 IL17RBQ9NRM6 502 aa18.38■□□□□ 0.53
POLR2J3-218ENST00000513506 SAGE1Q9NXZ1 904 aa18.38■□□□□ 0.53
POLR2J3-218ENST00000513506 CCL15-CCL14A0A0B4J2E2 113 aa18.37■□□□□ 0.53
POLR2J3-218ENST00000513506 SLC27A2O14975 620 aa18.37■□□□□ 0.53
POLR2J3-218ENST00000513506 CA12O43570 354 aa18.37■□□□□ 0.53
POLR2J3-218ENST00000513506 ALDH1A1P00352 501 aa18.37■□□□□ 0.53
POLR2J3-218ENST00000513506 USP14P54578 494 aa18.37■□□□□ 0.53
POLR2J3-218ENST00000513506 ICA1Q05084 483 aa18.37■□□□□ 0.53
POLR2J3-218ENST00000513506 CCL15Q16663 113 aa18.37■□□□□ 0.53
POLR2J3-218ENST00000513506 CREB3L3Q68CJ9 461 aa18.37■□□□□ 0.53
POLR2J3-218ENST00000513506 ACER1Q8TDN7 264 aa18.37■□□□□ 0.53
POLR2J3-218ENST00000513506 ANKS1AQ92625 1134 aa18.37■□□□□ 0.53
POLR2J3-218ENST00000513506 TTC14Q96N46 770 aa18.37■□□□□ 0.53
POLR2J3-218ENST00000513506 USP26Q9BXU7 913 aa18.37■□□□□ 0.53
POLR2J3-218ENST00000513506 KRT23Q9C075 422 aa18.37■□□□□ 0.53
POLR2J3-218ENST00000513506 TAF6LQ9Y6J9 622 aa18.37■□□□□ 0.53
POLR2J3-218ENST00000513506 NEDD4P46934 1319 aa18.37■□□□□ 0.53
POLR2J3-218ENST00000513506 TRIM75PA6NK02 468 aa18.36■□□□□ 0.53
POLR2J3-218ENST00000513506 E7EWF7 191 aa18.36■□□□□ 0.53
POLR2J3-218ENST00000513506 IGF2BP3O00425 579 aaKnown RBP eCLIP18.36■□□□□ 0.53
POLR2J3-218ENST00000513506 MPHOSPH10O00566 681 aaKnown RBP18.36■□□□□ 0.53
POLR2J3-218ENST00000513506 TSPY3P0CV98 308 aa18.36■□□□□ 0.53
POLR2J3-218ENST00000513506 TSPY8P0CW00 308 aa18.36■□□□□ 0.53
POLR2J3-218ENST00000513506 EEF2P13639 858 aaKnown RBP18.36■□□□□ 0.53
POLR2J3-218ENST00000513506 HSPA4P34932 840 aa18.36■□□□□ 0.53
POLR2J3-218ENST00000513506 RNF20Q5VTR2 975 aa18.36■□□□□ 0.53
POLR2J3-218ENST00000513506 USP17L2Q6R6M4 530 aa18.36■□□□□ 0.53
POLR2J3-218ENST00000513506 NKX2-3Q8TAU0 364 aa18.36■□□□□ 0.53
POLR2J3-218ENST00000513506 IL17RAQ96F46 866 aa18.36■□□□□ 0.53
POLR2J3-218ENST00000513506 CEP95Q96GE4 821 aa18.36■□□□□ 0.53
POLR2J3-218ENST00000513506 MTA3Q9BTC8 594 aa18.36■□□□□ 0.53
POLR2J3-218ENST00000513506 SH2D4AQ9H788 454 aa18.36■□□□□ 0.53
POLR2J3-218ENST00000513506 EMILIN3Q9NT22 766 aa18.36■□□□□ 0.53
POLR2J3-218ENST00000513506 ATAD5Q96QE3 1844 aa18.35■□□□□ 0.53
POLR2J3-218ENST00000513506 TSPY2A6NKD2 308 aa18.35■□□□□ 0.53
POLR2J3-218ENST00000513506 RANBP6O60518 1105 aaKnown RBP18.35■□□□□ 0.53
POLR2J3-218ENST00000513506 HOXA7P31268 230 aaPredicted RBP18.35■□□□□ 0.53
POLR2J3-218ENST00000513506 MKRN3Q13064 507 aaKnown RBP18.35■□□□□ 0.53
POLR2J3-218ENST00000513506 MTMR2Q13614 643 aa18.35■□□□□ 0.53
POLR2J3-218ENST00000513506 C8orf34Q49A92 452 aa18.35■□□□□ 0.53
POLR2J3-218ENST00000513506 CCDC178Q5BJE1 867 aa18.35■□□□□ 0.53
POLR2J3-218ENST00000513506 NOM1Q5C9Z4 860 aaKnown RBP18.35■□□□□ 0.53
POLR2J3-218ENST00000513506 FAM47AQ5JRC9 791 aa18.35■□□□□ 0.53
POLR2J3-218ENST00000513506 OTUD7BQ6GQQ9 843 aa18.35■□□□□ 0.53
POLR2J3-218ENST00000513506 STOX1Q6ZVD7 989 aa18.35■□□□□ 0.53
POLR2J3-218ENST00000513506 DGKHQ86XP1 1220 aa18.35■□□□□ 0.53
POLR2J3-218ENST00000513506 LPAR1Q92633 364 aa18.35■□□□□ 0.53
POLR2J3-218ENST00000513506 ARHGEF10LQ9HCE6 1279 aa18.35■□□□□ 0.53
POLR2J3-218ENST00000513506 ZSWIM5Q9P217 1185 aa18.35■□□□□ 0.53
POLR2J3-218ENST00000513506 AGTPBP1Q9UPW5 1226 aa18.35■□□□□ 0.53
POLR2J3-218ENST00000513506 BTBD19C9JJ37 291 aa18.34■□□□□ 0.53
POLR2J3-218ENST00000513506 TTLL1O95922 423 aa18.34■□□□□ 0.53
POLR2J3-218ENST00000513506 HMGCS2P54868 508 aa18.34■□□□□ 0.53
POLR2J3-218ENST00000513506 GRM1Q13255 1194 aa18.34■□□□□ 0.53
POLR2J3-218ENST00000513506 RCSD1Q6JBY9 416 aa18.34■□□□□ 0.53
POLR2J3-218ENST00000513506 STK11IPQ8N1F8 1099 aa18.34■□□□□ 0.53
POLR2J3-218ENST00000513506 FAM43AQ8N2R8 423 aa18.34■□□□□ 0.53
POLR2J3-218ENST00000513506 VCPKMTQ9H867 229 aa18.34■□□□□ 0.53
POLR2J3-218ENST00000513506 MB21D2Q8IYB1 491 aaPredicted RBP18.33■□□□□ 0.52
POLR2J3-218ENST00000513506 RASEFQ8IZ41 740 aa18.33■□□□□ 0.52
POLR2J3-218ENST00000513506 GMCL1P1Q8NEA9 526 aa18.33■□□□□ 0.52
POLR2J3-218ENST00000513506 NCOA7Q8NI08 942 aa18.33■□□□□ 0.52
POLR2J3-218ENST00000513506 RNF186Q9NXI6 227 aa18.33■□□□□ 0.52
POLR2J3-218ENST00000513506 B4E1Z4 1266 aa18.32■□□□□ 0.52
POLR2J3-218ENST00000513506 KDM4AO75164 1064 aa18.32■□□□□ 0.52
POLR2J3-218ENST00000513506 TRDNQ13061 729 aa18.32■□□□□ 0.52
POLR2J3-218ENST00000513506 KRT32Q14532 448 aa18.32■□□□□ 0.52
POLR2J3-218ENST00000513506 CLEC10AQ8IUN9 316 aa18.32■□□□□ 0.52
POLR2J3-218ENST00000513506 PTPRFP10586 1907 aa18.31■□□□□ 0.52
POLR2J3-218ENST00000513506 WDR19Q8NEZ3 1342 aa18.31■□□□□ 0.52
POLR2J3-218ENST00000513506 ZKSCAN1P17029 563 aaPredicted RBP18.31■□□□□ 0.52
POLR2J3-218ENST00000513506 PABPC4Q13310 644 aaKnown RBP eCLIP18.31■□□□□ 0.52
POLR2J3-218ENST00000513506 IQCA1Q86XH1 822 aa18.31■□□□□ 0.52
POLR2J3-218ENST00000513506 TMOD4Q9NZQ9 345 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms