RNA–Protein interactions for RNA: ENST00000512925.1

PFDN1-205, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 900 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-205ENST00000512925 RTP1P59025 263 aa12.82□□□□□ -0.36
PFDN1-205ENST00000512925 FOXP4Q8IVH2 680 aaPredicted RBP12.82□□□□□ -0.36
PFDN1-205ENST00000512925 GTF3C2Q8WUA4 911 aaPredicted RBP12.82□□□□□ -0.36
PFDN1-205ENST00000512925 RAI14Q9P0K7 980 aa12.82□□□□□ -0.36
PFDN1-205ENST00000512925 ZBTB21Q9ULJ3 1066 aa12.82□□□□□ -0.36
PFDN1-205ENST00000512925 AKAP2Q9Y2D5 859 aa12.82□□□□□ -0.36
PFDN1-205ENST00000512925 NDUFB9Q9Y6M9 179 aa12.82□□□□□ -0.36
PFDN1-205ENST00000512925 MSCO60682 206 aa12.81□□□□□ -0.36
PFDN1-205ENST00000512925 ARID4AP29374 1257 aaPredicted RBP12.81□□□□□ -0.36
PFDN1-205ENST00000512925 PPP4CP60510 307 aa12.81□□□□□ -0.36
PFDN1-205ENST00000512925 ALDH1L2Q3SY69 923 aa12.81□□□□□ -0.36
PFDN1-205ENST00000512925 MFSD14CQ5VZR4 134 aa12.81□□□□□ -0.36
PFDN1-205ENST00000512925 MAPKAPK5Q8IW41 473 aa12.81□□□□□ -0.36
PFDN1-205ENST00000512925 CCAR1Q8IX12 1150 aaKnown RBP12.81□□□□□ -0.36
PFDN1-205ENST00000512925 NPLOC4Q8TAT6 608 aa12.81□□□□□ -0.36
PFDN1-205ENST00000512925 NEUROD6Q96NK8 337 aa12.81□□□□□ -0.36
PFDN1-205ENST00000512925 GINM1Q9NU53 330 aa12.81□□□□□ -0.36
PFDN1-205ENST00000512925 RABGAP1Q9Y3P9 1069 aa12.81□□□□□ -0.36
PFDN1-205ENST00000512925 SLC15A5A6NIM6 579 aa12.8□□□□□ -0.36
PFDN1-205ENST00000512925 CYP2C19P33261 490 aa12.8□□□□□ -0.36
PFDN1-205ENST00000512925 MCAMP43121 646 aa12.8□□□□□ -0.36
PFDN1-205ENST00000512925 SMAD3P84022 425 aaKnown RBP12.8□□□□□ -0.36
PFDN1-205ENST00000512925 GJC2Q5T442 439 aaPredicted RBP12.8□□□□□ -0.36
PFDN1-205ENST00000512925 USP17L2Q6R6M4 530 aa12.8□□□□□ -0.36
PFDN1-205ENST00000512925 SLC39A5Q6ZMH5 540 aa12.8□□□□□ -0.36
PFDN1-205ENST00000512925 ADGRA1Q86SQ6 560 aa12.8□□□□□ -0.36
PFDN1-205ENST00000512925 FAM9BQ8IZU0 186 aa12.8□□□□□ -0.36
PFDN1-205ENST00000512925 TGFBRAP1Q8WUH2 860 aa12.8□□□□□ -0.36
PFDN1-205ENST00000512925 BADQ92934 168 aa12.8□□□□□ -0.36
PFDN1-205ENST00000512925 C12orf42Q96LP6 360 aa12.8□□□□□ -0.36
PFDN1-205ENST00000512925 DCBLD2Q96PD2 775 aa12.8□□□□□ -0.36
PFDN1-205ENST00000512925 MEIS3Q99687 375 aa12.8□□□□□ -0.36
PFDN1-205ENST00000512925 AATFQ9NY61 560 aaKnown RBP eCLIP12.8□□□□□ -0.36
PFDN1-205ENST00000512925 PRKAG2Q9UGJ0 569 aa12.8□□□□□ -0.36
PFDN1-205ENST00000512925 PALD1Q9ULE6 856 aa12.8□□□□□ -0.36
PFDN1-205ENST00000512925 ATP11BQ9Y2G3 1177 aa12.8□□□□□ -0.36
PFDN1-205ENST00000512925 FLT1P17948 1338 aa12.8□□□□□ -0.36
PFDN1-205ENST00000512925 LTBP2Q14767 1821 aa12.79□□□□□ -0.36
PFDN1-205ENST00000512925 CYBAP13498 195 aa12.79□□□□□ -0.36
PFDN1-205ENST00000512925 CNGA1P29973 690 aa12.79□□□□□ -0.36
PFDN1-205ENST00000512925 ATP2B2Q01814 1243 aa12.79□□□□□ -0.36
PFDN1-205ENST00000512925 GRB14Q14449 540 aa12.79□□□□□ -0.36
PFDN1-205ENST00000512925 SNX17Q15036 470 aa12.79□□□□□ -0.36
PFDN1-205ENST00000512925 LBX2Q6XYB7 198 aa12.79□□□□□ -0.36
PFDN1-205ENST00000512925 CATSPERGQ6ZRH7 1159 aa12.79□□□□□ -0.36
PFDN1-205ENST00000512925 SH3RF1Q7Z6J0 888 aa12.79□□□□□ -0.36
PFDN1-205ENST00000512925 BTBD7Q9P203 1132 aa12.79□□□□□ -0.36
PFDN1-205ENST00000512925 LRP2BPQ9P2M1 347 aa12.79□□□□□ -0.36
PFDN1-205ENST00000512925 FRMPD3Q5JV73 1810 aa12.78□□□□□ -0.36
PFDN1-205ENST00000512925 TRIM43BA6NCK2 446 aa12.78□□□□□ -0.36
PFDN1-205ENST00000512925 USP17L15C9J2P7 530 aa12.78□□□□□ -0.36
PFDN1-205ENST00000512925 USP17L13C9JLJ4 530 aa12.78□□□□□ -0.36
PFDN1-205ENST00000512925 USP17L11C9JVI0 530 aa12.78□□□□□ -0.36
PFDN1-205ENST00000512925 USP17L18D6R9N7 530 aa12.78□□□□□ -0.36
PFDN1-205ENST00000512925 USP17L22D6RA61 530 aa12.78□□□□□ -0.36
PFDN1-205ENST00000512925 USP17L17D6RBQ6 530 aa12.78□□□□□ -0.36
PFDN1-205ENST00000512925 USP17L19D6RCP7 530 aa12.78□□□□□ -0.36
PFDN1-205ENST00000512925 USP17L20D6RJB6 530 aa12.78□□□□□ -0.36
PFDN1-205ENST00000512925 GLRX3O76003 335 aaKnown RBP12.78□□□□□ -0.36
PFDN1-205ENST00000512925 BAG3O95817 575 aa12.78□□□□□ -0.36
PFDN1-205ENST00000512925 CCNA1P78396 465 aa12.78□□□□□ -0.36
PFDN1-205ENST00000512925 USP17L24Q0WX57 530 aa12.78□□□□□ -0.36
PFDN1-205ENST00000512925 MTX1Q13505 466 aa12.78□□□□□ -0.36
PFDN1-205ENST00000512925 CRACR2BQ8N4Y2 399 aaPredicted RBP12.78□□□□□ -0.36
PFDN1-205ENST00000512925 SYMPKQ92797 1274 aaKnown RBP12.78□□□□□ -0.36
PFDN1-205ENST00000512925 TRIM43Q96BQ3 446 aaPredicted RBP12.78□□□□□ -0.36
PFDN1-205ENST00000512925 CWC22Q9HCG8 908 aaKnown RBP12.78□□□□□ -0.36
PFDN1-205ENST00000512925 PDLIM7Q9NR12 457 aa12.78□□□□□ -0.36
PFDN1-205ENST00000512925 NOB1Q9ULX3 412 aaKnown RBP12.78□□□□□ -0.36
PFDN1-205ENST00000512925 HDAC5Q9UQL6 1122 aa12.78□□□□□ -0.36
PFDN1-205ENST00000512925 E9PSI1 815 aa12.77□□□□□ -0.37
PFDN1-205ENST00000512925 SRGAP3O43295 1099 aa12.77□□□□□ -0.37
PFDN1-205ENST00000512925 GH2P01242 217 aa12.77□□□□□ -0.37
PFDN1-205ENST00000512925 FOSL2P15408 326 aa12.77□□□□□ -0.37
PFDN1-205ENST00000512925 ITGB8P26012 769 aa12.77□□□□□ -0.37
PFDN1-205ENST00000512925 SLFN5Q08AF3 891 aa12.77□□□□□ -0.37
PFDN1-205ENST00000512925 TRIM60Q495X7 471 aa12.77□□□□□ -0.37
PFDN1-205ENST00000512925 NAA16Q6N069 864 aaPredicted RBP12.77□□□□□ -0.37
PFDN1-205ENST00000512925 TATDN1Q6P1N9 297 aa12.77□□□□□ -0.37
PFDN1-205ENST00000512925 ARRDC4Q8NCT1 418 aa12.77□□□□□ -0.37
PFDN1-205ENST00000512925 SMC4Q9NTJ3 1288 aa12.77□□□□□ -0.37
PFDN1-205ENST00000512925 PLCG2P16885 1265 aa12.76□□□□□ -0.37
PFDN1-205ENST00000512925 VCAM1P19320 739 aa12.76□□□□□ -0.37
PFDN1-205ENST00000512925 COL9A1P20849 921 aa12.76□□□□□ -0.37
PFDN1-205ENST00000512925 EPHB4P54760 987 aa12.76□□□□□ -0.37
PFDN1-205ENST00000512925 ZYXQ15942 572 aaKnown RBP12.76□□□□□ -0.37
PFDN1-205ENST00000512925 GORABQ5T7V8 394 aa12.76□□□□□ -0.37
PFDN1-205ENST00000512925 WDR78Q5VTH9 848 aa12.76□□□□□ -0.37
PFDN1-205ENST00000512925 C1orf53Q5VUE5 145 aa12.76□□□□□ -0.37
PFDN1-205ENST00000512925 ANO1Q5XXA6 986 aa12.76□□□□□ -0.37
PFDN1-205ENST00000512925 OLFML2BQ68BL8 750 aa12.76□□□□□ -0.37
PFDN1-205ENST00000512925 USP38Q8NB14 1042 aa12.76□□□□□ -0.37
PFDN1-205ENST00000512925 ACER1Q8TDN7 264 aa12.76□□□□□ -0.37
PFDN1-205ENST00000512925 NOL10Q9BSC4 688 aaKnown RBP12.76□□□□□ -0.37
PFDN1-205ENST00000512925 PRDM5Q9NQX1 630 aaPredicted RBP12.76□□□□□ -0.37
PFDN1-205ENST00000512925 SNRKQ9NRH2 765 aa12.76□□□□□ -0.37
PFDN1-205ENST00000512925 SAP30BPQ9UHR5 308 aaKnown RBP12.76□□□□□ -0.37
PFDN1-205ENST00000512925 RLFQ13129 1914 aa12.76□□□□□ -0.37
PFDN1-205ENST00000512925 TMEM265A0A087WTH1 108 aa12.75□□□□□ -0.37
PFDN1-205ENST00000512925 SPDYE16A6NNV3 312 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms