RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 PPARAQ07869 468 aa13.85□□□□□ -0.19
COL11A1-210ENST00000512756 PNOCQ13519 176 aa13.85□□□□□ -0.19
COL11A1-210ENST00000512756 RBM26Q5T8P6 1007 aaKnown RBP13.85□□□□□ -0.19
COL11A1-210ENST00000512756 TBC1D22AQ8WUA7 517 aa13.85□□□□□ -0.19
COL11A1-210ENST00000512756 NDUFB9Q9Y6M9 179 aa13.85□□□□□ -0.19
COL11A1-210ENST00000512756 SLC8A3P57103 927 aa13.85□□□□□ -0.19
COL11A1-210ENST00000512756 ATP11AP98196 1134 aa13.85□□□□□ -0.19
COL11A1-210ENST00000512756 MAIP1Q8WWC4 291 aa13.85□□□□□ -0.19
COL11A1-210ENST00000512756 IFIH1Q9BYX4 1025 aaKnown RBP13.85□□□□□ -0.19
COL11A1-210ENST00000512756 VPS54Q9P1Q0 977 aa13.85□□□□□ -0.19
COL11A1-210ENST00000512756 SAR1BQ9Y6B6 198 aa13.85□□□□□ -0.19
COL11A1-210ENST00000512756 CIB2O75838 187 aa13.85□□□□□ -0.19
COL11A1-210ENST00000512756 GAS8O95995 478 aa13.85□□□□□ -0.19
COL11A1-210ENST00000512756 USP28Q96RU2 1077 aa13.85□□□□□ -0.19
COL11A1-210ENST00000512756 CCDC160A6NGH7 325 aa13.85□□□□□ -0.19
COL11A1-210ENST00000512756 RNASE9P60153 205 aaKnown RBP13.85□□□□□ -0.19
COL11A1-210ENST00000512756 SP4Q02446 784 aa13.85□□□□□ -0.19
COL11A1-210ENST00000512756 PTH1RQ03431 593 aa13.85□□□□□ -0.19
COL11A1-210ENST00000512756 DYMQ7RTS9 669 aa13.85□□□□□ -0.19
COL11A1-210ENST00000512756 TRMT44Q8IYL2 757 aaKnown RBP13.85□□□□□ -0.19
COL11A1-210ENST00000512756 EAF2Q96CJ1 260 aaPredicted RBP13.85□□□□□ -0.19
COL11A1-210ENST00000512756 HAUS7Q99871 368 aa13.85□□□□□ -0.19
COL11A1-210ENST00000512756 PLCB1Q9NQ66 1216 aa13.85□□□□□ -0.19
COL11A1-210ENST00000512756 STAP2Q9UGK3 403 aa13.85□□□□□ -0.19
COL11A1-210ENST00000512756 KCNG1Q9UIX4 513 aa13.85□□□□□ -0.19
COL11A1-210ENST00000512756 ERBB4Q15303 1308 aa13.85□□□□□ -0.19
COL11A1-210ENST00000512756 KDM5DQ9BY66 1539 aa13.84□□□□□ -0.19
COL11A1-210ENST00000512756 A0A0D9SFI3 127 aa13.84□□□□□ -0.19
COL11A1-210ENST00000512756 TFAP4Q01664 338 aa13.84□□□□□ -0.19
COL11A1-210ENST00000512756 MCTP2Q6DN12 878 aa13.84□□□□□ -0.19
COL11A1-210ENST00000512756 TRIM58Q8NG06 486 aa13.84□□□□□ -0.19
COL11A1-210ENST00000512756 KDM3AQ9Y4C1 1321 aa13.84□□□□□ -0.19
COL11A1-210ENST00000512756 UBAP1LF5GYI3 381 aa13.84□□□□□ -0.19
COL11A1-210ENST00000512756 EXOC3O60645 756 aa13.84□□□□□ -0.19
COL11A1-210ENST00000512756 PSMC4P43686 418 aa13.84□□□□□ -0.19
COL11A1-210ENST00000512756 TRPC3Q13507 836 aa13.84□□□□□ -0.19
COL11A1-210ENST00000512756 PEX26Q7Z412 305 aa13.84□□□□□ -0.19
COL11A1-210ENST00000512756 DNAJC10Q8IXB1 793 aa13.84□□□□□ -0.19
COL11A1-210ENST00000512756 PKD2L1Q9P0L9 805 aa13.84□□□□□ -0.19
COL11A1-210ENST00000512756 TPCN1Q9ULQ1 816 aa13.84□□□□□ -0.19
COL11A1-210ENST00000512756 ZMYM6O95789 1325 aa13.84□□□□□ -0.19
COL11A1-210ENST00000512756 NR1I2O75469 434 aa13.84□□□□□ -0.19
COL11A1-210ENST00000512756 FEZ2Q9UHY8 353 aaPredicted RBP13.84□□□□□ -0.19
COL11A1-210ENST00000512756 OAS2P29728 719 aaKnown RBP13.84□□□□□ -0.19
COL11A1-210ENST00000512756 EIF6P56537 245 aaKnown RBP13.84□□□□□ -0.19
COL11A1-210ENST00000512756 SND1Q7KZF4 910 aaKnown RBP eCLIP13.84□□□□□ -0.19
COL11A1-210ENST00000512756 ASIC3Q9UHC3 531 aa13.84□□□□□ -0.19
COL11A1-210ENST00000512756 CCNL1Q9UK58 526 aaPredicted RBP13.84□□□□□ -0.19
COL11A1-210ENST00000512756 KDM5AP29375 1690 aaKnown RBP13.83□□□□□ -0.19
COL11A1-210ENST00000512756 ZBTB9Q96C00 473 aa13.83□□□□□ -0.19
COL11A1-210ENST00000512756 PARP2Q9UGN5 583 aa13.83□□□□□ -0.19
COL11A1-210ENST00000512756 DNM2P50570 870 aa13.83□□□□□ -0.2
COL11A1-210ENST00000512756 MRPS9P82933 396 aaKnown RBP13.83□□□□□ -0.2
COL11A1-210ENST00000512756 TRMT2AQ8IZ69 625 aaKnown RBP13.83□□□□□ -0.2
COL11A1-210ENST00000512756 MYCT1Q8N699 235 aa13.83□□□□□ -0.2
COL11A1-210ENST00000512756 CFAP57Q96MR6 1250 aa13.83□□□□□ -0.2
COL11A1-210ENST00000512756 BCL2L12Q9HB09 334 aa13.83□□□□□ -0.2
COL11A1-210ENST00000512756 ATP8A2Q9NTI2 1148 aa13.83□□□□□ -0.2
COL11A1-210ENST00000512756 ATP10AO60312 1499 aa13.83□□□□□ -0.2
COL11A1-210ENST00000512756 A0A1B0GUA9 196 aa13.83□□□□□ -0.2
COL11A1-210ENST00000512756 E7EVH7 732 aa13.83□□□□□ -0.2
COL11A1-210ENST00000512756 PPP2R5EQ16537 467 aa13.83□□□□□ -0.2
COL11A1-210ENST00000512756 KLHL7Q8IXQ5 586 aa13.83□□□□□ -0.2
COL11A1-210ENST00000512756 KIFC2Q96AC6 838 aa13.83□□□□□ -0.2
COL11A1-210ENST00000512756 CABS1Q96KC9 395 aa13.83□□□□□ -0.2
COL11A1-210ENST00000512756 RAB17Q9H0T7 212 aa13.83□□□□□ -0.2
COL11A1-210ENST00000512756 OSBPL3Q9H4L5 887 aa13.83□□□□□ -0.2
COL11A1-210ENST00000512756 PALD1Q9ULE6 856 aa13.83□□□□□ -0.2
COL11A1-210ENST00000512756 PPFIA4O75335 1185 aa13.83□□□□□ -0.2
COL11A1-210ENST00000512756 HSPD1P10809 573 aaKnown RBP13.83□□□□□ -0.2
COL11A1-210ENST00000512756 ETF1P62495 437 aaKnown RBP13.83□□□□□ -0.2
COL11A1-210ENST00000512756 UAP1Q16222 522 aaPredicted RBP13.83□□□□□ -0.2
COL11A1-210ENST00000512756 RRAGAQ7L523 313 aa13.83□□□□□ -0.2
COL11A1-210ENST00000512756 BLZF1Q9H2G9 400 aa13.83□□□□□ -0.2
COL11A1-210ENST00000512756 FAM184BQ9ULE4 1060 aa13.83□□□□□ -0.2
COL11A1-210ENST00000512756 KAT6BQ8WYB5 2073 aa13.82□□□□□ -0.2
COL11A1-210ENST00000512756 PPM1FP49593 454 aaPredicted RBP13.82□□□□□ -0.2
COL11A1-210ENST00000512756 GALNT17Q6IS24 598 aa13.82□□□□□ -0.2
COL11A1-210ENST00000512756 SPATA31E1Q6ZUB1 1445 aa13.82□□□□□ -0.2
COL11A1-210ENST00000512756 KCNJ18B7U540 433 aa13.82□□□□□ -0.2
COL11A1-210ENST00000512756 H7C1D1 291 aa13.82□□□□□ -0.2
COL11A1-210ENST00000512756 KCNJ12Q14500 433 aa13.82□□□□□ -0.2
COL11A1-210ENST00000512756 CDAN1Q8IWY9 1227 aa13.82□□□□□ -0.2
COL11A1-210ENST00000512756 DDX23Q9BUQ8 820 aaKnown RBP13.82□□□□□ -0.2
COL11A1-210ENST00000512756 MRPL44Q9H9J2 332 aaKnown RBP13.82□□□□□ -0.2
COL11A1-210ENST00000512756 A0A1W2PQ27 194 aa13.82□□□□□ -0.2
COL11A1-210ENST00000512756 A0A1W2PQ64 194 aa13.82□□□□□ -0.2
COL11A1-210ENST00000512756 A0A1W2PQD8 194 aa13.82□□□□□ -0.2
COL11A1-210ENST00000512756 ADKP55263 362 aaKnown RBP13.82□□□□□ -0.2
COL11A1-210ENST00000512756 CTSWP56202 376 aa13.82□□□□□ -0.2
COL11A1-210ENST00000512756 ERCC6LQ2NKX8 1250 aa13.82□□□□□ -0.2
COL11A1-210ENST00000512756 FANCBQ8NB91 859 aa13.82□□□□□ -0.2
COL11A1-210ENST00000512756 ORAI2Q96SN7 254 aa13.82□□□□□ -0.2
COL11A1-210ENST00000512756 TRIM31Q9BZY9 425 aa13.82□□□□□ -0.2
COL11A1-210ENST00000512756 GCNT3O95395 438 aa13.82□□□□□ -0.2
COL11A1-210ENST00000512756 HARSP12081 509 aaKnown RBP13.82□□□□□ -0.2
COL11A1-210ENST00000512756 LONRF3Q496Y0 759 aa13.82□□□□□ -0.2
COL11A1-210ENST00000512756 IFNL3Q8IZI9 196 aa13.82□□□□□ -0.2
COL11A1-210ENST00000512756 CACNA2D3Q8IZS8 1091 aa13.82□□□□□ -0.2
COL11A1-210ENST00000512756 IL17REQ8NFR9 667 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms