RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 DLGAP3O95886 979 aa10.02□□□□□ -0.81
RFC1-214ENST00000512726 FAM209AQ5JX71 171 aa10.02□□□□□ -0.81
RFC1-214ENST00000512726 ODR4Q5SWX8 454 aa10.02□□□□□ -0.81
RFC1-214ENST00000512726 C8orf86Q6ZUL3 223 aa10.02□□□□□ -0.81
RFC1-214ENST00000512726 CDC37L1Q7L3B6 337 aa10.02□□□□□ -0.81
RFC1-214ENST00000512726 JAMLQ86YT9 394 aa10.02□□□□□ -0.81
RFC1-214ENST00000512726 SCUBE1Q8IWY4 988 aa10.02□□□□□ -0.81
RFC1-214ENST00000512726 GPR161Q8N6U8 529 aaKnown RBP10.02□□□□□ -0.81
RFC1-214ENST00000512726 KCT2Q8NC54 265 aa10.02□□□□□ -0.81
RFC1-214ENST00000512726 RNF214Q8ND24 703 aa10.02□□□□□ -0.81
RFC1-214ENST00000512726 JDP2Q8WYK2 163 aa10.02□□□□□ -0.81
RFC1-214ENST00000512726 AARSD1Q9BTE6 412 aaKnown RBP10.02□□□□□ -0.81
RFC1-214ENST00000512726 FAM86C1Q9NVL1 165 aa10.02□□□□□ -0.81
RFC1-214ENST00000512726 MCM8Q9UJA3 840 aa10.02□□□□□ -0.81
RFC1-214ENST00000512726 TMPRSS2O15393 492 aa10.01□□□□□ -0.81
RFC1-214ENST00000512726 KCNQ2O43526 872 aa10.01□□□□□ -0.81
RFC1-214ENST00000512726 CLEC3AO75596 197 aa10.01□□□□□ -0.81
RFC1-214ENST00000512726 RAPGEF3O95398 923 aa10.01□□□□□ -0.81
RFC1-214ENST00000512726 AKAP4Q5JQC9 854 aa10.01□□□□□ -0.81
RFC1-214ENST00000512726 TDRD10Q5VZ19 366 aaKnown RBP10.01□□□□□ -0.81
RFC1-214ENST00000512726 CHSY3Q70JA7 882 aa10.01□□□□□ -0.81
RFC1-214ENST00000512726 PPFIBP1Q86W92 1011 aa10.01□□□□□ -0.81
RFC1-214ENST00000512726 DMRTC2Q8IXT2 367 aaPredicted RBP10.01□□□□□ -0.81
RFC1-214ENST00000512726 PPP1R14AQ96A00 147 aa10.01□□□□□ -0.81
RFC1-214ENST00000512726 HAUS7Q99871 368 aa10.01□□□□□ -0.81
RFC1-214ENST00000512726 IER2Q9BTL4 223 aa10.01□□□□□ -0.81
RFC1-214ENST00000512726 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.01□□□□□ -0.81
RFC1-214ENST00000512726 CRIM1Q9NZV1 1036 aa10.01□□□□□ -0.81
RFC1-214ENST00000512726 SUSD2Q9UGT4 822 aa10.01□□□□□ -0.81
RFC1-214ENST00000512726 UBOX5O94941 541 aa10□□□□□ -0.81
RFC1-214ENST00000512726 EPHX1P07099 455 aa10□□□□□ -0.81
RFC1-214ENST00000512726 CDKN1CP49918 316 aaPredicted RBP10□□□□□ -0.81
RFC1-214ENST00000512726 NFKB2Q00653 900 aa10□□□□□ -0.81
RFC1-214ENST00000512726 EXOSC10Q01780 885 aaKnown RBP10□□□□□ -0.81
RFC1-214ENST00000512726 FOXD4L6Q3SYB3 417 aaPredicted RBP10□□□□□ -0.81
RFC1-214ENST00000512726 FOXD4L3Q6VB84 417 aaPredicted RBP10□□□□□ -0.81
RFC1-214ENST00000512726 LRRN4CLQ8ND94 238 aa10□□□□□ -0.81
RFC1-214ENST00000512726 MRPL4Q9BYD3 311 aaKnown RBP10□□□□□ -0.81
RFC1-214ENST00000512726 ATXN3LQ9H3M9 355 aa10□□□□□ -0.81
RFC1-214ENST00000512726 NXF1Q9UBU9 619 aaKnown RBP10□□□□□ -0.81
RFC1-214ENST00000512726 MAPRE3Q9UPY8 281 aa10□□□□□ -0.81
RFC1-214ENST00000512726 ALG1L2C9J202 215 aa9.99□□□□□ -0.81
RFC1-214ENST00000512726 PPP2R2AP63151 447 aa9.99□□□□□ -0.81
RFC1-214ENST00000512726 DDX42Q86XP3 938 aaKnown RBP eCLIP9.99□□□□□ -0.81
RFC1-214ENST00000512726 CYB5D2Q8WUJ1 264 aa9.99□□□□□ -0.81
RFC1-214ENST00000512726 EDARADDQ8WWZ3 215 aa9.99□□□□□ -0.81
RFC1-214ENST00000512726 COL25A1Q9BXS0 654 aaPredicted RBP9.99□□□□□ -0.81
RFC1-214ENST00000512726 GBP3Q9H0R5 595 aa9.99□□□□□ -0.81
RFC1-214ENST00000512726 FBRSQ9HAH7 460 aa9.99□□□□□ -0.81
RFC1-214ENST00000512726 DISC1Q9NRI5 854 aa9.99□□□□□ -0.81
RFC1-214ENST00000512726 PPP1R9AQ9ULJ8 1098 aa9.99□□□□□ -0.81
RFC1-214ENST00000512726 FAN1Q9Y2M0 1017 aa9.99□□□□□ -0.81
RFC1-214ENST00000512726 SPDYE3A6NKU9 549 aa9.98□□□□□ -0.81
RFC1-214ENST00000512726 ITGAVP06756 1048 aa9.98□□□□□ -0.81
RFC1-214ENST00000512726 POU3F3P20264 500 aaPredicted RBP9.98□□□□□ -0.81
RFC1-214ENST00000512726 PMLP29590 882 aa9.98□□□□□ -0.81
RFC1-214ENST00000512726 NTF4P34130 210 aa9.98□□□□□ -0.81
RFC1-214ENST00000512726 EVA1CP58658 441 aa9.98□□□□□ -0.81
RFC1-214ENST00000512726 SUMO1P63165 101 aaKnown RBP9.98□□□□□ -0.81
RFC1-214ENST00000512726 SRSF11Q05519 484 aaKnown RBP9.98□□□□□ -0.81
RFC1-214ENST00000512726 DUOXA2Q1HG44 320 aa9.98□□□□□ -0.81
RFC1-214ENST00000512726 NPAS3Q8IXF0 933 aa9.98□□□□□ -0.81
RFC1-214ENST00000512726 CCDC144CPQ8IYA2 1237 aa9.98□□□□□ -0.81
RFC1-214ENST00000512726 DTWD1Q8N5C7 304 aa9.98□□□□□ -0.81
RFC1-214ENST00000512726 GALNT6Q8NCL4 622 aa9.98□□□□□ -0.81
RFC1-214ENST00000512726 FANCD2OSQ96PS1 177 aa9.98□□□□□ -0.81
RFC1-214ENST00000512726 DPH2Q9BQC3 489 aaPredicted RBP9.98□□□□□ -0.81
RFC1-214ENST00000512726 KLHL25Q9H0H3 589 aa9.98□□□□□ -0.81
RFC1-214ENST00000512726 INTS7Q9NVH2 962 aaKnown RBP9.98□□□□□ -0.81
RFC1-214ENST00000512726 KCNK4Q9NYG8 393 aa9.98□□□□□ -0.81
RFC1-214ENST00000512726 DNAJC25-GNG10A0A024R161 153 aa9.97□□□□□ -0.81
RFC1-214ENST00000512726 C9IYK1 514 aa9.97□□□□□ -0.81
RFC1-214ENST00000512726 FGFR1P11362 822 aa9.97□□□□□ -0.81
RFC1-214ENST00000512726 AXDND1Q5T1B0 1012 aaPredicted RBP9.97□□□□□ -0.81
RFC1-214ENST00000512726 YOD1Q5VVQ6 348 aaPredicted RBP9.97□□□□□ -0.81
RFC1-214ENST00000512726 WWC2Q6AWC2 1192 aa9.97□□□□□ -0.81
RFC1-214ENST00000512726 ADAT2Q7Z6V5 191 aaKnown RBP9.97□□□□□ -0.81
RFC1-214ENST00000512726 RNF180Q86T96 592 aa9.97□□□□□ -0.81
RFC1-214ENST00000512726 BAHD1Q8TBE0 780 aaPredicted RBP9.97□□□□□ -0.81
RFC1-214ENST00000512726 UBASH3BQ8TF42 649 aa9.97□□□□□ -0.81
RFC1-214ENST00000512726 ACDQ96AP0 544 aa9.97□□□□□ -0.81
RFC1-214ENST00000512726 BTBD6Q96KE9 485 aa9.97□□□□□ -0.81
RFC1-214ENST00000512726 MAGEC2Q9UBF1 373 aaPredicted RBP9.97□□□□□ -0.81
RFC1-214ENST00000512726 SUGT1Q9Y2Z0 365 aa9.97□□□□□ -0.81
RFC1-214ENST00000512726 GSG1L2A8MUP6 293 aa9.96□□□□□ -0.82
RFC1-214ENST00000512726 CPEP16870 476 aa9.96□□□□□ -0.82
RFC1-214ENST00000512726 CAP2P40123 477 aa9.96□□□□□ -0.82
RFC1-214ENST00000512726 NKG7Q16617 165 aa9.96□□□□□ -0.82
RFC1-214ENST00000512726 BRDTQ58F21 947 aaPredicted RBP9.96□□□□□ -0.82
RFC1-214ENST00000512726 RNFT1Q5M7Z0 435 aa9.96□□□□□ -0.82
RFC1-214ENST00000512726 C1orf229Q6ZS94 237 aaPredicted RBP9.96□□□□□ -0.82
RFC1-214ENST00000512726 ZNF227Q86WZ6 799 aa9.96□□□□□ -0.82
RFC1-214ENST00000512726 FMNL3Q8IVF7 1028 aa9.96□□□□□ -0.82
RFC1-214ENST00000512726 UBR7Q8N806 425 aa9.96□□□□□ -0.82
RFC1-214ENST00000512726 FGD4Q96M96 766 aa9.96□□□□□ -0.82
RFC1-214ENST00000512726 CLUHP3Q96NS8 147 aa9.96□□□□□ -0.82
RFC1-214ENST00000512726 TMPRSS13Q9BYE2 586 aa9.96□□□□□ -0.82
RFC1-214ENST00000512726 FAM126AQ9BYI3 521 aaPredicted RBP9.96□□□□□ -0.82
RFC1-214ENST00000512726 TCEAL9Q9UHQ7 104 aa9.96□□□□□ -0.82
RFC1-214ENST00000512726 AP4E1Q9UPM8 1137 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 156.7 ms