RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 PPP1R3GB7ZBB8 358 aa11.13□□□□□ -0.63
MSH3-203ENST00000512531 UBE2Q2LH0YL09 131 aa11.13□□□□□ -0.63
MSH3-203ENST00000512531 GPR25O00155 361 aa11.13□□□□□ -0.63
MSH3-203ENST00000512531 DNAJB2P25686 324 aa11.13□□□□□ -0.63
MSH3-203ENST00000512531 GJA5P36382 358 aa11.13□□□□□ -0.63
MSH3-203ENST00000512531 SOX10P56693 466 aa11.13□□□□□ -0.63
MSH3-203ENST00000512531 TRDNQ13061 729 aa11.13□□□□□ -0.63
MSH3-203ENST00000512531 PUM3Q15397 648 aaKnown RBP11.13□□□□□ -0.63
MSH3-203ENST00000512531 NBPF9Q3BBW0 867 aa11.13□□□□□ -0.63
MSH3-203ENST00000512531 ZMYM1Q5SVZ6 1142 aa11.13□□□□□ -0.63
MSH3-203ENST00000512531 LDLRAD1Q5T700 205 aa11.13□□□□□ -0.63
MSH3-203ENST00000512531 FBXO46Q6PJ61 603 aaPredicted RBP11.13□□□□□ -0.63
MSH3-203ENST00000512531 ARMC9Q7Z3E5 817 aa11.13□□□□□ -0.63
MSH3-203ENST00000512531 CCDC83Q8IWF9 413 aa11.13□□□□□ -0.63
MSH3-203ENST00000512531 FAM184AQ8NB25 1140 aa11.13□□□□□ -0.63
MSH3-203ENST00000512531 ZNF296Q8WUU4 475 aaPredicted RBP11.13□□□□□ -0.63
MSH3-203ENST00000512531 ZBED3Q96IU2 234 aaPredicted RBP11.13□□□□□ -0.63
MSH3-203ENST00000512531 LLPHQ9BRT6 129 aaKnown RBP11.13□□□□□ -0.63
MSH3-203ENST00000512531 HMX1Q9NP08 348 aaPredicted RBP11.13□□□□□ -0.63
MSH3-203ENST00000512531 PCDHGC3Q9UN70 934 aa11.13□□□□□ -0.63
MSH3-203ENST00000512531 POTEB2H3BUK9 544 aa11.12□□□□□ -0.63
MSH3-203ENST00000512531 F13A1P00488 732 aa11.12□□□□□ -0.63
MSH3-203ENST00000512531 GJB2P29033 226 aa11.12□□□□□ -0.63
MSH3-203ENST00000512531 TIMM10P62072 90 aa11.12□□□□□ -0.63
MSH3-203ENST00000512531 CCDC173Q0VFZ6 552 aa11.12□□□□□ -0.63
MSH3-203ENST00000512531 MAP3K11Q16584 847 aa11.12□□□□□ -0.63
MSH3-203ENST00000512531 LRRC24Q50LG9 513 aa11.12□□□□□ -0.63
MSH3-203ENST00000512531 LARP1BQ659C4 914 aaKnown RBP11.12□□□□□ -0.63
MSH3-203ENST00000512531 CAVIN1Q6NZI2 390 aaKnown RBP11.12□□□□□ -0.63
MSH3-203ENST00000512531 C15orf52Q6ZUT6 534 aaKnown RBP11.12□□□□□ -0.63
MSH3-203ENST00000512531 DHX32Q7L7V1 743 aaKnown RBP11.12□□□□□ -0.63
MSH3-203ENST00000512531 KCTD17Q8N5Z5 321 aa11.12□□□□□ -0.63
MSH3-203ENST00000512531 TMEM87AQ8NBN3 555 aa11.12□□□□□ -0.63
MSH3-203ENST00000512531 LPIN2Q92539 896 aa11.12□□□□□ -0.63
MSH3-203ENST00000512531 APPBP2Q92624 585 aa11.12□□□□□ -0.63
MSH3-203ENST00000512531 IL25Q9H293 177 aa11.12□□□□□ -0.63
MSH3-203ENST00000512531 GREM2Q9H772 168 aa11.12□□□□□ -0.63
MSH3-203ENST00000512531 GNL3LQ9NVN8 582 aaKnown RBP11.12□□□□□ -0.63
MSH3-203ENST00000512531 PNMA3Q9UL41 463 aa11.12□□□□□ -0.63
MSH3-203ENST00000512531 PPP2R3BQ9Y5P8 575 aa11.12□□□□□ -0.63
MSH3-203ENST00000512531 GOLGA6L4A6NEF3 574 aa11.11□□□□□ -0.63
MSH3-203ENST00000512531 H3BQV1 296 aa11.11□□□□□ -0.63
MSH3-203ENST00000512531 FKTNO75072 461 aa11.11□□□□□ -0.63
MSH3-203ENST00000512531 UBE2HP62256 183 aa11.11□□□□□ -0.63
MSH3-203ENST00000512531 FKBP1AP62942 108 aaKnown RBP11.11□□□□□ -0.63
MSH3-203ENST00000512531 KRT85P78386 507 aa11.11□□□□□ -0.63
MSH3-203ENST00000512531 TTLL5Q6EMB2 1281 aa11.11□□□□□ -0.63
MSH3-203ENST00000512531 RALYLQ86SE5 291 aaKnown RBP11.11□□□□□ -0.63
MSH3-203ENST00000512531 ZNF594Q96JF6 807 aaPredicted RBP11.11□□□□□ -0.63
MSH3-203ENST00000512531 CALR3Q96L12 384 aaKnown RBP11.11□□□□□ -0.63
MSH3-203ENST00000512531 CCDC85AQ96PX6 553 aaPredicted RBP11.11□□□□□ -0.63
MSH3-203ENST00000512531 SCAND2PQ9GZW5 306 aaPredicted RBP11.11□□□□□ -0.63
MSH3-203ENST00000512531 ZNF646O15015 1829 aaPredicted RBP11.11□□□□□ -0.63
MSH3-203ENST00000512531 ZNF804BA4D1E1 1349 aa11.1□□□□□ -0.63
MSH3-203ENST00000512531 VPS37CA5D8V6 355 aaPredicted RBP11.1□□□□□ -0.63
MSH3-203ENST00000512531 MANSC4A6NHS7 340 aaPredicted RBP11.1□□□□□ -0.63
MSH3-203ENST00000512531 PDE8BO95263 885 aa11.1□□□□□ -0.63
MSH3-203ENST00000512531 TBC1D8O95759 1140 aa11.1□□□□□ -0.63
MSH3-203ENST00000512531 ZBTB48P10074 688 aaPredicted RBP11.1□□□□□ -0.63
MSH3-203ENST00000512531 SYT1P21579 422 aa11.1□□□□□ -0.63
MSH3-203ENST00000512531 NASPP49321 788 aaPredicted RBP11.1□□□□□ -0.63
MSH3-203ENST00000512531 GUCA2AQ02747 115 aa11.1□□□□□ -0.63
MSH3-203ENST00000512531 MAP3K12Q12852 859 aa11.1□□□□□ -0.63
MSH3-203ENST00000512531 PROX2Q3B8N5 592 aa11.1□□□□□ -0.63
MSH3-203ENST00000512531 SPRYD7Q5W111 196 aa11.1□□□□□ -0.63
MSH3-203ENST00000512531 MOB2Q70IA6 237 aa11.1□□□□□ -0.63
MSH3-203ENST00000512531 ZNF589Q86UQ0 364 aaPredicted RBP11.1□□□□□ -0.63
MSH3-203ENST00000512531 TRIM34Q9BYJ4 488 aa11.1□□□□□ -0.63
MSH3-203ENST00000512531 ZSCAN16Q9H4T2 348 aaPredicted RBP11.1□□□□□ -0.63
MSH3-203ENST00000512531 RIPOR2Q9Y4F9 1068 aa11.1□□□□□ -0.63
MSH3-203ENST00000512531 WDR19Q8NEZ3 1342 aa11.09□□□□□ -0.63
MSH3-203ENST00000512531 GNAT2P19087 354 aa11.09□□□□□ -0.63
MSH3-203ENST00000512531 UBE3CQ15386 1083 aa11.09□□□□□ -0.63
MSH3-203ENST00000512531 ADCK5Q3MIX3 580 aa11.09□□□□□ -0.63
MSH3-203ENST00000512531 ZSCAN23Q3MJ62 389 aa11.09□□□□□ -0.63
MSH3-203ENST00000512531 ATL3Q6DD88 541 aa11.09□□□□□ -0.63
MSH3-203ENST00000512531 TMED8Q6PL24 325 aaPredicted RBP11.09□□□□□ -0.63
MSH3-203ENST00000512531 CPLX2Q6PUV4 134 aaKnown RBP11.09□□□□□ -0.63
MSH3-203ENST00000512531 Q6ZUG5 572 aa11.09□□□□□ -0.63
MSH3-203ENST00000512531 FAM43AQ8N2R8 423 aa11.09□□□□□ -0.63
MSH3-203ENST00000512531 CFAP45Q9UL16 551 aa11.09□□□□□ -0.63
MSH3-203ENST00000512531 ZDHHC9Q9Y397 364 aa11.09□□□□□ -0.63
MSH3-203ENST00000512531 WTIPA6NIX2 430 aaPredicted RBP11.08□□□□□ -0.64
MSH3-203ENST00000512531 ZNF213O14771 459 aa11.08□□□□□ -0.64
MSH3-203ENST00000512531 HOXA2O43364 376 aa11.08□□□□□ -0.64
MSH3-203ENST00000512531 PPP1R12BO60237 982 aaPredicted RBP11.08□□□□□ -0.64
MSH3-203ENST00000512531 IGSF3O75054 1194 aa11.08□□□□□ -0.64
MSH3-203ENST00000512531 HSPD1P10809 573 aaKnown RBP11.08□□□□□ -0.64
MSH3-203ENST00000512531 XRCC6P12956 609 aaKnown RBP eCLIP11.08□□□□□ -0.64
MSH3-203ENST00000512531 PKP1Q13835 747 aa11.08□□□□□ -0.64
MSH3-203ENST00000512531 ME3Q16798 604 aa11.08□□□□□ -0.64
MSH3-203ENST00000512531 CCDC183Q5T5S1 534 aa11.08□□□□□ -0.64
MSH3-203ENST00000512531 FOXD4L5Q5VV16 416 aaPredicted RBP11.08□□□□□ -0.64
MSH3-203ENST00000512531 PRAMEF18Q5VWM3 479 aa11.08□□□□□ -0.64
MSH3-203ENST00000512531 LRSAM1Q6UWE0 723 aa11.08□□□□□ -0.64
MSH3-203ENST00000512531 TXNRD3Q86VQ6 643 aa11.08□□□□□ -0.64
MSH3-203ENST00000512531 RGS22Q8NE09 1264 aa11.08□□□□□ -0.64
MSH3-203ENST00000512531 NCOA7Q8NI08 942 aa11.08□□□□□ -0.64
MSH3-203ENST00000512531 FOXD4L4Q8WXT5 416 aaPredicted RBP11.08□□□□□ -0.64
MSH3-203ENST00000512531 GTF3C6Q969F1 213 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms