RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 TMEM87BQ96K49 555 aa9.49□□□□□ -0.89
HTT-209ENST00000512068 PSMD1Q99460 953 aa9.49□□□□□ -0.89
HTT-209ENST00000512068 UBAC1Q9BSL1 405 aa9.49□□□□□ -0.89
HTT-209ENST00000512068 LRRC2Q9BYS8 371 aa9.49□□□□□ -0.89
HTT-209ENST00000512068 ZNF287Q9HBT7 754 aa9.49□□□□□ -0.89
HTT-209ENST00000512068 TPCN1Q9ULQ1 816 aa9.49□□□□□ -0.89
HTT-209ENST00000512068 PCDHGC3Q9UN70 934 aa9.49□□□□□ -0.89
HTT-209ENST00000512068 TTF2Q9UNY4 1162 aaKnown RBP9.49□□□□□ -0.89
HTT-209ENST00000512068 CCDC69A6NI79 296 aa9.48□□□□□ -0.89
HTT-209ENST00000512068 B4E1Z4 1266 aa9.48□□□□□ -0.89
HTT-209ENST00000512068 LILRB3O75022 631 aa9.48□□□□□ -0.89
HTT-209ENST00000512068 POLR3DP05423 398 aaPredicted RBP9.48□□□□□ -0.89
HTT-209ENST00000512068 PDCP20941 246 aa9.48□□□□□ -0.89
HTT-209ENST00000512068 NT5C2P49902 561 aa9.48□□□□□ -0.89
HTT-209ENST00000512068 RBM5P52756 815 aaKnown RBP eCLIP9.48□□□□□ -0.89
HTT-209ENST00000512068 FKBP1AP62942 108 aaKnown RBP9.48□□□□□ -0.89
HTT-209ENST00000512068 EXOSC10Q01780 885 aaKnown RBP9.48□□□□□ -0.89
HTT-209ENST00000512068 RAB3GAP1Q15042 981 aa9.48□□□□□ -0.89
HTT-209ENST00000512068 ME3Q16798 604 aa9.48□□□□□ -0.89
HTT-209ENST00000512068 STRIP1Q5VSL9 837 aa9.48□□□□□ -0.89
HTT-209ENST00000512068 CPLX2Q6PUV4 134 aaKnown RBP9.48□□□□□ -0.89
HTT-209ENST00000512068 CHST3Q7LGC8 479 aa9.48□□□□□ -0.89
HTT-209ENST00000512068 TBC1D10CQ8IV04 446 aa9.48□□□□□ -0.89
HTT-209ENST00000512068 NIM1KQ8IY84 436 aa9.48□□□□□ -0.89
HTT-209ENST00000512068 MB21D2Q8IYB1 491 aaPredicted RBP9.48□□□□□ -0.89
HTT-209ENST00000512068 STK11IPQ8N1F8 1099 aa9.48□□□□□ -0.89
HTT-209ENST00000512068 FAM184AQ8NB25 1140 aa9.48□□□□□ -0.89
HTT-209ENST00000512068 VPS33BQ9H267 617 aa9.48□□□□□ -0.89
HTT-209ENST00000512068 MCM9Q9NXL9 1143 aa9.48□□□□□ -0.89
HTT-209ENST00000512068 CD2APQ9Y5K6 639 aa9.48□□□□□ -0.89
HTT-209ENST00000512068 MYH1P12882 1939 aa9.47□□□□□ -0.89
HTT-209ENST00000512068 GPR75-ASB3A0A0A6YYF3 556 aa9.47□□□□□ -0.89
HTT-209ENST00000512068 GOLGA8BA8MQT2 603 aa9.47□□□□□ -0.89
HTT-209ENST00000512068 USP17L12C9JPN9 530 aa9.47□□□□□ -0.89
HTT-209ENST00000512068 USP17L21D6R901 530 aa9.47□□□□□ -0.89
HTT-209ENST00000512068 CPLX1O14810 134 aa9.47□□□□□ -0.89
HTT-209ENST00000512068 IFIT3O14879 490 aaKnown RBP9.47□□□□□ -0.89
HTT-209ENST00000512068 GJB2P29033 226 aa9.47□□□□□ -0.89
HTT-209ENST00000512068 GUCA2AQ02747 115 aa9.47□□□□□ -0.89
HTT-209ENST00000512068 APOBRQ0VD83 1088 aa9.47□□□□□ -0.89
HTT-209ENST00000512068 NFKBIBQ15653 356 aa9.47□□□□□ -0.89
HTT-209ENST00000512068 TMEM67Q5HYA8 995 aa9.47□□□□□ -0.89
HTT-209ENST00000512068 IQCA1Q86XH1 822 aa9.47□□□□□ -0.89
HTT-209ENST00000512068 TMTC2Q8N394 836 aa9.47□□□□□ -0.89
HTT-209ENST00000512068 SH3RF3Q8TEJ3 882 aaPredicted RBP9.47□□□□□ -0.89
HTT-209ENST00000512068 TGFBRAP1Q8WUH2 860 aa9.47□□□□□ -0.89
HTT-209ENST00000512068 C7orf43Q8WVR3 580 aa9.47□□□□□ -0.89
HTT-209ENST00000512068 GTF3C6Q969F1 213 aa9.47□□□□□ -0.89
HTT-209ENST00000512068 ZNF274Q96GC6 653 aaPredicted RBP9.47□□□□□ -0.89
HTT-209ENST00000512068 ANP32EQ9BTT0 268 aa9.47□□□□□ -0.89
HTT-209ENST00000512068 DCP1AQ9NPI6 582 aaPredicted RBP9.47□□□□□ -0.89
HTT-209ENST00000512068 ANAPC4Q9UJX5 808 aa9.47□□□□□ -0.89
HTT-209ENST00000512068 HDAC9Q9UKV0 1011 aa9.47□□□□□ -0.89
HTT-209ENST00000512068 ANGEL1Q9UNK9 670 aaKnown RBP9.47□□□□□ -0.89
HTT-209ENST00000512068 NEDD4P46934 1319 aa9.47□□□□□ -0.89
HTT-209ENST00000512068 MYO3BQ8WXR4 1341 aa9.47□□□□□ -0.89
HTT-209ENST00000512068 WDR33Q9C0J8 1336 aaKnown RBP9.47□□□□□ -0.89
HTT-209ENST00000512068 KLF18A0A0U1RQI7 1052 aa9.46□□□□□ -0.9
HTT-209ENST00000512068 RANBP6O60518 1105 aaKnown RBP9.46□□□□□ -0.9
HTT-209ENST00000512068 PFKFB2O60825 505 aa9.46□□□□□ -0.9
HTT-209ENST00000512068 CDKL5O76039 1030 aa9.46□□□□□ -0.9
HTT-209ENST00000512068 LARGE1O95461 756 aa9.46□□□□□ -0.9
HTT-209ENST00000512068 DDIT3P35638 169 aa9.46□□□□□ -0.9
HTT-209ENST00000512068 HMGN5P82970 282 aaKnown RBP9.46□□□□□ -0.9
HTT-209ENST00000512068 WTAPQ15007 396 aa9.46□□□□□ -0.9
HTT-209ENST00000512068 QPCTQ16769 361 aa9.46□□□□□ -0.9
HTT-209ENST00000512068 PUS10Q3MIT2 529 aaKnown RBP9.46□□□□□ -0.9
HTT-209ENST00000512068 SBK1Q52WX2 424 aa9.46□□□□□ -0.9
HTT-209ENST00000512068 CTR9Q6PD62 1173 aa9.46□□□□□ -0.9
HTT-209ENST00000512068 MAPKAPK5Q8IW41 473 aa9.46□□□□□ -0.9
HTT-209ENST00000512068 FBXL16Q8N461 479 aa9.46□□□□□ -0.9
HTT-209ENST00000512068 NECAB1Q8N987 351 aa9.46□□□□□ -0.9
HTT-209ENST00000512068 ZNF384Q8TF68 577 aa9.46□□□□□ -0.9
HTT-209ENST00000512068 JDP2Q8WYK2 163 aa9.46□□□□□ -0.9
HTT-209ENST00000512068 LLPHQ9BRT6 129 aaKnown RBP9.46□□□□□ -0.9
HTT-209ENST00000512068 MTA3Q9BTC8 594 aa9.46□□□□□ -0.9
HTT-209ENST00000512068 TAOK3Q9H2K8 898 aa9.46□□□□□ -0.9
HTT-209ENST00000512068 MKNK2Q9HBH9 465 aa9.46□□□□□ -0.9
HTT-209ENST00000512068 BCS1LQ9Y276 419 aa9.46□□□□□ -0.9
HTT-209ENST00000512068 SLC27A5Q9Y2P5 690 aa9.46□□□□□ -0.9
HTT-209ENST00000512068 PCDHB3Q9Y5E6 796 aa9.46□□□□□ -0.9
HTT-209ENST00000512068 ATP6V1DQ9Y5K8 247 aa9.46□□□□□ -0.9
HTT-209ENST00000512068 PSME4Q14997 1843 aa9.46□□□□□ -0.9
HTT-209ENST00000512068 GAKO14976 1311 aa9.46□□□□□ -0.9
HTT-209ENST00000512068 CDK5RAP2Q96SN8 1893 aa9.46□□□□□ -0.9
HTT-209ENST00000512068 FOCADQ5VW36 1801 aa9.45□□□□□ -0.9
HTT-209ENST00000512068 ECM29Q5VYK3 1845 aa9.45□□□□□ -0.9
HTT-209ENST00000512068 BRCA1P38398 1863 aaKnown RBP9.45□□□□□ -0.9
HTT-209ENST00000512068 MYH8P13535 1937 aa9.45□□□□□ -0.9
HTT-209ENST00000512068 TSPY2A6NKD2 308 aa9.45□□□□□ -0.9
HTT-209ENST00000512068 H3BQV1 296 aa9.45□□□□□ -0.9
HTT-209ENST00000512068 SH2B2O14492 632 aaPredicted RBP9.45□□□□□ -0.9
HTT-209ENST00000512068 HLA-DOAP06340 250 aa9.45□□□□□ -0.9
HTT-209ENST00000512068 IARSP41252 1262 aaKnown RBP9.45□□□□□ -0.9
HTT-209ENST00000512068 CRKP46108 304 aa9.45□□□□□ -0.9
HTT-209ENST00000512068 METAP2P50579 478 aaKnown RBP eCLIP9.45□□□□□ -0.9
HTT-209ENST00000512068 SCNN1DP51172 638 aa9.45□□□□□ -0.9
HTT-209ENST00000512068 PTPN5P54829 565 aa9.45□□□□□ -0.9
HTT-209ENST00000512068 GRIK5Q16478 980 aa9.45□□□□□ -0.9
HTT-209ENST00000512068 CSPP1Q1MSJ5 1256 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms