RNA–Protein interactions for RNA: ENST00000511817.1

XRCC4-205, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene XRCC4, Length 1,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-205ENST00000511817 CPNE3O75131 537 aaKnown RBP4.4□□□□□ -1.7
XRCC4-205ENST00000511817 CYP7A1P22680 504 aa4.4□□□□□ -1.7
XRCC4-205ENST00000511817 MAGEA10P43363 369 aaPredicted RBP4.4□□□□□ -1.7
XRCC4-205ENST00000511817 SRSF3P84103 164 aaKnown RBP4.4□□□□□ -1.7
XRCC4-205ENST00000511817 SLBPQ14493 270 aaKnown RBP eCLIP4.4□□□□□ -1.7
XRCC4-205ENST00000511817 GAB4Q2WGN9 574 aa4.4□□□□□ -1.7
XRCC4-205ENST00000511817 LINC01356Q8N9X3 169 aa4.4□□□□□ -1.7
XRCC4-205ENST00000511817 RIN3Q8TB24 985 aa4.4□□□□□ -1.7
XRCC4-205ENST00000511817 DHX38Q92620 1227 aaKnown RBP4.4□□□□□ -1.7
XRCC4-205ENST00000511817 SHISA4Q96DD7 197 aa4.4□□□□□ -1.7
XRCC4-205ENST00000511817 GADD45BO75293 160 aaPredicted RBP4.39□□□□□ -1.71
XRCC4-205ENST00000511817 LETMD1Q6P1Q0 360 aa4.39□□□□□ -1.71
XRCC4-205ENST00000511817 MPRIPQ6WCQ1 1025 aa4.39□□□□□ -1.71
XRCC4-205ENST00000511817 DTHD1Q6ZMT9 781 aa4.39□□□□□ -1.71
XRCC4-205ENST00000511817 SPPL2CQ8IUH8 684 aa4.39□□□□□ -1.71
XRCC4-205ENST00000511817 TMEFF1Q8IYR6 380 aa4.39□□□□□ -1.71
XRCC4-205ENST00000511817 PPP1R13LQ8WUF5 828 aa4.39□□□□□ -1.71
XRCC4-205ENST00000511817 SIRT5Q9NXA8 310 aa4.39□□□□□ -1.71
XRCC4-205ENST00000511817 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.39□□□□□ -1.71
XRCC4-205ENST00000511817 WASH4PA8MWX3 477 aa4.39□□□□□ -1.71
XRCC4-205ENST00000511817 TPP2P29144 1249 aaPredicted RBP4.39□□□□□ -1.71
XRCC4-205ENST00000511817 EPHB3P54753 998 aa4.39□□□□□ -1.71
XRCC4-205ENST00000511817 SF3B2Q13435 895 aaKnown RBP4.39□□□□□ -1.71
XRCC4-205ENST00000511817 GRM2Q14416 872 aa4.39□□□□□ -1.71
XRCC4-205ENST00000511817 CRB2Q5IJ48 1285 aa4.39□□□□□ -1.71
XRCC4-205ENST00000511817 CNKSR3Q6P9H4 555 aa4.39□□□□□ -1.71
XRCC4-205ENST00000511817 TP53I13Q8NBR0 393 aaPredicted RBP4.39□□□□□ -1.71
XRCC4-205ENST00000511817 DUSP15Q9H1R2 295 aaPredicted RBP4.39□□□□□ -1.71
XRCC4-205ENST00000511817 CNTD2Q9H8S5 307 aa4.39□□□□□ -1.71
XRCC4-205ENST00000511817 GPR160Q9UJ42 338 aa4.39□□□□□ -1.71
XRCC4-205ENST00000511817 TRIM37O94972 964 aa4.38□□□□□ -1.71
XRCC4-205ENST00000511817 ADAM17P78536 824 aa4.38□□□□□ -1.71
XRCC4-205ENST00000511817 CHRNEQ04844 493 aa4.38□□□□□ -1.71
XRCC4-205ENST00000511817 CCDC74AQ96AQ1 378 aa4.38□□□□□ -1.71
XRCC4-205ENST00000511817 FBRSQ9HAH7 460 aa4.38□□□□□ -1.71
XRCC4-205ENST00000511817 CBX8Q9HC52 389 aa4.38□□□□□ -1.71
XRCC4-205ENST00000511817 FKBP4Q02790 459 aaKnown RBP eCLIP4.37□□□□□ -1.71
XRCC4-205ENST00000511817 EGR3Q06889 387 aa4.37□□□□□ -1.71
XRCC4-205ENST00000511817 FAM129CQ86XR2 697 aa4.37□□□□□ -1.71
XRCC4-205ENST00000511817 TRIT1Q9H3H1 467 aaKnown RBP4.37□□□□□ -1.71
XRCC4-205ENST00000511817 DUSP13Q9UII6 198 aa4.37□□□□□ -1.71
XRCC4-205ENST00000511817 C1QTNF3-AMACRE9PGA6 284 aa4.36□□□□□ -1.71
XRCC4-205ENST00000511817 XRCC5P13010 732 aaKnown RBP4.36□□□□□ -1.71
XRCC4-205ENST00000511817 FCGRTP55899 365 aa4.36□□□□□ -1.71
XRCC4-205ENST00000511817 ORC1Q13415 861 aa4.36□□□□□ -1.71
XRCC4-205ENST00000511817 RBAK-RBAKDNI3L0D1 243 aa4.35□□□□□ -1.71
XRCC4-205ENST00000511817 NKG7Q16617 165 aa4.35□□□□□ -1.71
XRCC4-205ENST00000511817 SCARA3Q6AZY7 606 aa4.35□□□□□ -1.71
XRCC4-205ENST00000511817 ANKS4BQ8N8V4 417 aa4.35□□□□□ -1.71
XRCC4-205ENST00000511817 GRIN3AQ8TCU5 1115 aa4.35□□□□□ -1.71
XRCC4-205ENST00000511817 ELMO3Q96BJ8 720 aa4.35□□□□□ -1.71
XRCC4-205ENST00000511817 MRIQ9BWK5 157 aa4.35□□□□□ -1.71
XRCC4-205ENST00000511817 PPP4R2Q9NY27 417 aa4.35□□□□□ -1.71
XRCC4-205ENST00000511817 BMP6P22004 513 aa4.35□□□□□ -1.71
XRCC4-205ENST00000511817 TGM1P22735 817 aa4.35□□□□□ -1.71
XRCC4-205ENST00000511817 VIPR1P32241 457 aa4.35□□□□□ -1.71
XRCC4-205ENST00000511817 KCNC1P48547 511 aa4.35□□□□□ -1.71
XRCC4-205ENST00000511817 HNRNPA0Q13151 305 aaKnown RBP4.35□□□□□ -1.71
XRCC4-205ENST00000511817 UBXN11Q5T124 520 aa4.35□□□□□ -1.71
XRCC4-205ENST00000511817 ADGRF1Q5T601 910 aa4.35□□□□□ -1.71
XRCC4-205ENST00000511817 VWCEQ96DN2 955 aa4.35□□□□□ -1.71
XRCC4-205ENST00000511817 SCAND2PQ9GZW5 306 aaPredicted RBP4.35□□□□□ -1.71
XRCC4-205ENST00000511817 PCDHA4Q9UN74 947 aa4.35□□□□□ -1.71
XRCC4-205ENST00000511817 CST3P01034 146 aaPredicted RBP4.34□□□□□ -1.71
XRCC4-205ENST00000511817 GALK1P51570 392 aa4.34□□□□□ -1.71
XRCC4-205ENST00000511817 CDR1P51861 262 aa4.34□□□□□ -1.71
XRCC4-205ENST00000511817 CAP1Q01518 475 aa4.34□□□□□ -1.71
XRCC4-205ENST00000511817 DUSP4Q13115 394 aa4.34□□□□□ -1.71
XRCC4-205ENST00000511817 CDH24Q86UP0 819 aa4.34□□□□□ -1.71
XRCC4-205ENST00000511817 NLRX1Q86UT6 975 aa4.34□□□□□ -1.71
XRCC4-205ENST00000511817 TSPYL5Q86VY4 417 aaPredicted RBP4.34□□□□□ -1.71
XRCC4-205ENST00000511817 MZB1Q8WU39 189 aa4.34□□□□□ -1.71
XRCC4-205ENST00000511817 SYTL4Q96C24 671 aaPredicted RBP4.34□□□□□ -1.71
XRCC4-205ENST00000511817 Q96M66 194 aa4.34□□□□□ -1.71
XRCC4-205ENST00000511817 NECAB3Q96P71 396 aaPredicted RBP4.34□□□□□ -1.71
XRCC4-205ENST00000511817 WNT10AQ9GZT5 417 aa4.34□□□□□ -1.71
XRCC4-205ENST00000511817 GPATCH2Q9NW75 528 aa4.34□□□□□ -1.71
XRCC4-205ENST00000511817 GDF5P43026 501 aa4.33□□□□□ -1.72
XRCC4-205ENST00000511817 YBX1P67809 324 aaKnown RBP4.33□□□□□ -1.72
XRCC4-205ENST00000511817 PLCB3Q01970 1234 aa4.33□□□□□ -1.72
XRCC4-205ENST00000511817 HID1Q8IV36 788 aa4.33□□□□□ -1.72
XRCC4-205ENST00000511817 PWWP2AQ96N64 755 aa4.33□□□□□ -1.72
XRCC4-205ENST00000511817 GPR62Q9BZJ7 368 aa4.33□□□□□ -1.72
XRCC4-205ENST00000511817 EBF1Q9UH73 591 aa4.33□□□□□ -1.72
XRCC4-205ENST00000511817 NOTOA8MTQ0 251 aa4.32□□□□□ -1.72
XRCC4-205ENST00000511817 SLPIP03973 132 aa4.32□□□□□ -1.72
XRCC4-205ENST00000511817 SSFA2P28290 1259 aa4.32□□□□□ -1.72
XRCC4-205ENST00000511817 SLURP1P55000 103 aa4.32□□□□□ -1.72
XRCC4-205ENST00000511817 PRAMEF13Q5VWM6 474 aa4.32□□□□□ -1.72
XRCC4-205ENST00000511817 SAMM50Q9Y512 469 aa4.32□□□□□ -1.72
XRCC4-205ENST00000511817 PCDHA11Q9Y5I1 949 aa4.32□□□□□ -1.72
XRCC4-205ENST00000511817 PRAMEF27A3QJZ7 478 aa4.32□□□□□ -1.72
XRCC4-205ENST00000511817 CYR61O00622 381 aa4.32□□□□□ -1.72
XRCC4-205ENST00000511817 EIF1AYO14602 144 aaKnown RBP4.32□□□□□ -1.72
XRCC4-205ENST00000511817 INPP5AQ14642 412 aa4.32□□□□□ -1.72
XRCC4-205ENST00000511817 CPZQ66K79 652 aa4.32□□□□□ -1.72
XRCC4-205ENST00000511817 SIRT2Q8IXJ6 389 aa4.32□□□□□ -1.72
XRCC4-205ENST00000511817 LINC01599Q8WXQ3 324 aa4.32□□□□□ -1.72
XRCC4-205ENST00000511817 CRTAC1Q9NQ79 661 aa4.32□□□□□ -1.72
XRCC4-205ENST00000511817 SMPD4Q9NXE4 827 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms