RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 POTEJP0CG39 1038 aa11.08□□□□□ -0.64
POLR2J3-215ENST00000511313 PPP4CP60510 307 aa11.08□□□□□ -0.64
POLR2J3-215ENST00000511313 KRT25Q7Z3Z0 450 aa11.08□□□□□ -0.64
POLR2J3-215ENST00000511313 MTMR14Q8NCE2 650 aa11.08□□□□□ -0.64
POLR2J3-215ENST00000511313 EXOC4Q96A65 974 aa11.08□□□□□ -0.64
POLR2J3-215ENST00000511313 SPDYE2BA6NHP3 402 aa11.08□□□□□ -0.64
POLR2J3-215ENST00000511313 SPDYE6P0CI01 402 aa11.08□□□□□ -0.64
POLR2J3-215ENST00000511313 OTUD6AQ7L8S5 288 aa11.08□□□□□ -0.64
POLR2J3-215ENST00000511313 SLC17A8Q8NDX2 589 aa11.08□□□□□ -0.64
POLR2J3-215ENST00000511313 ARMT1Q9H993 441 aa11.08□□□□□ -0.64
POLR2J3-215ENST00000511313 MLXIPQ9HAP2 919 aa11.08□□□□□ -0.64
POLR2J3-215ENST00000511313 MAP3K20Q9NYL2 800 aaKnown RBP11.08□□□□□ -0.64
POLR2J3-215ENST00000511313 SDSP20132 328 aa11.08□□□□□ -0.64
POLR2J3-215ENST00000511313 PHKA1P46020 1223 aa11.08□□□□□ -0.64
POLR2J3-215ENST00000511313 STAT2P52630 851 aa11.08□□□□□ -0.64
POLR2J3-215ENST00000511313 SPDYE2Q495Y8 402 aa11.08□□□□□ -0.64
POLR2J3-215ENST00000511313 ARHGEF16Q5VV41 709 aa11.08□□□□□ -0.64
POLR2J3-215ENST00000511313 XRRA1Q6P2D8 792 aa11.08□□□□□ -0.64
POLR2J3-215ENST00000511313 HHIPL1Q96JK4 782 aa11.08□□□□□ -0.64
POLR2J3-215ENST00000511313 ELP3Q9H9T3 547 aa11.08□□□□□ -0.64
POLR2J3-215ENST00000511313 IGKV5-2P06315 115 aa11.07□□□□□ -0.64
POLR2J3-215ENST00000511313 PTPN12Q05209 780 aaKnown RBP11.07□□□□□ -0.64
POLR2J3-215ENST00000511313 PRPF38AQ8NAV1 312 aaKnown RBP11.07□□□□□ -0.64
POLR2J3-215ENST00000511313 FAM84BQ96KN1 310 aaPredicted RBP11.07□□□□□ -0.64
POLR2J3-215ENST00000511313 FAM167AQ96KS9 214 aa11.07□□□□□ -0.64
POLR2J3-215ENST00000511313 EHD4Q9H223 541 aa11.07□□□□□ -0.64
POLR2J3-215ENST00000511313 CLIP2Q9UDT6 1046 aa11.07□□□□□ -0.64
POLR2J3-215ENST00000511313 CCPG1Q9ULG6 757 aa11.07□□□□□ -0.64
POLR2J3-215ENST00000511313 NKRFO15226 690 aaKnown RBP eCLIP11.07□□□□□ -0.64
POLR2J3-215ENST00000511313 ZBTB24O43167 697 aaPredicted RBP11.07□□□□□ -0.64
POLR2J3-215ENST00000511313 CABYRO75952 493 aa11.07□□□□□ -0.64
POLR2J3-215ENST00000511313 EPS15P42566 896 aa11.07□□□□□ -0.64
POLR2J3-215ENST00000511313 MATR3P43243 847 aaKnown RBP eCLIP11.07□□□□□ -0.64
POLR2J3-215ENST00000511313 TFAP4Q01664 338 aa11.07□□□□□ -0.64
POLR2J3-215ENST00000511313 DHX8Q14562 1220 aaKnown RBP11.07□□□□□ -0.64
POLR2J3-215ENST00000511313 BACH1O14867 736 aa11.07□□□□□ -0.64
POLR2J3-215ENST00000511313 CCND2P30279 289 aa11.07□□□□□ -0.64
POLR2J3-215ENST00000511313 SUPT20HL2P0C7V6 817 aa11.07□□□□□ -0.64
POLR2J3-215ENST00000511313 HAUS3Q68CZ6 603 aa11.07□□□□□ -0.64
POLR2J3-215ENST00000511313 INO80BQ9C086 356 aaPredicted RBP11.07□□□□□ -0.64
POLR2J3-215ENST00000511313 HOXA7P31268 230 aaPredicted RBP11.06□□□□□ -0.64
POLR2J3-215ENST00000511313 CETN1Q12798 172 aa11.06□□□□□ -0.64
POLR2J3-215ENST00000511313 STK38Q15208 465 aa11.06□□□□□ -0.64
POLR2J3-215ENST00000511313 TNS4Q8IZW8 715 aa11.06□□□□□ -0.64
POLR2J3-215ENST00000511313 MMP19Q99542 508 aa11.06□□□□□ -0.64
POLR2J3-215ENST00000511313 RIPOR2Q9Y4F9 1068 aa11.06□□□□□ -0.64
POLR2J3-215ENST00000511313 LOC102724159A0A0B4J2E5 919 aa11.06□□□□□ -0.64
POLR2J3-215ENST00000511313 MECOMQ03112 1051 aa11.06□□□□□ -0.64
POLR2J3-215ENST00000511313 PWP2Q15269 919 aaKnown RBP11.06□□□□□ -0.64
POLR2J3-215ENST00000511313 PALM3A6NDB9 673 aaPredicted RBP11.06□□□□□ -0.64
POLR2J3-215ENST00000511313 TFRCP02786 760 aaKnown RBP11.06□□□□□ -0.64
POLR2J3-215ENST00000511313 LRRC24Q50LG9 513 aa11.06□□□□□ -0.64
POLR2J3-215ENST00000511313 DGKHQ86XP1 1220 aa11.06□□□□□ -0.64
POLR2J3-215ENST00000511313 TXLNBQ8N3L3 684 aa11.06□□□□□ -0.64
POLR2J3-215ENST00000511313 ACAD9Q9H845 621 aa11.06□□□□□ -0.64
POLR2J3-215ENST00000511313 MYPNQ86TC9 1320 aa11.06□□□□□ -0.64
POLR2J3-215ENST00000511313 ADCY7P51828 1080 aa11.05□□□□□ -0.64
POLR2J3-215ENST00000511313 RCAN1P53805 252 aa11.05□□□□□ -0.64
POLR2J3-215ENST00000511313 SP3Q02447 781 aa11.05□□□□□ -0.64
POLR2J3-215ENST00000511313 SLC9C1Q4G0N8 1177 aa11.05□□□□□ -0.64
POLR2J3-215ENST00000511313 CTU1Q7Z7A3 348 aaKnown RBP11.05□□□□□ -0.64
POLR2J3-215ENST00000511313 XPOTO43592 962 aaKnown RBP11.05□□□□□ -0.64
POLR2J3-215ENST00000511313 ADD2P35612 726 aa11.05□□□□□ -0.64
POLR2J3-215ENST00000511313 POLA2Q14181 598 aa11.05□□□□□ -0.64
POLR2J3-215ENST00000511313 JAG2Q9Y219 1238 aa11.05□□□□□ -0.64
POLR2J3-215ENST00000511313 TRIM75PA6NK02 468 aa11.05□□□□□ -0.64
POLR2J3-215ENST00000511313 TTLL4Q14679 1199 aa11.05□□□□□ -0.64
POLR2J3-215ENST00000511313 PPP1R18Q6NYC8 613 aa11.05□□□□□ -0.64
POLR2J3-215ENST00000511313 DHX32Q7L7V1 743 aaKnown RBP11.05□□□□□ -0.64
POLR2J3-215ENST00000511313 PLEKHH3Q7Z736 793 aa11.05□□□□□ -0.64
POLR2J3-215ENST00000511313 SLAIN1Q8ND83 568 aa11.05□□□□□ -0.64
POLR2J3-215ENST00000511313 VAT1LQ9HCJ6 419 aa11.05□□□□□ -0.64
POLR2J3-215ENST00000511313 SAGE1Q9NXZ1 904 aa11.05□□□□□ -0.64
POLR2J3-215ENST00000511313 NYAP2Q9P242 653 aa11.05□□□□□ -0.64
POLR2J3-215ENST00000511313 TRPM3Q9HCF6 1732 aaPredicted RBP11.05□□□□□ -0.64
POLR2J3-215ENST00000511313 CHMP4BP1P59074 171 aa11.05□□□□□ -0.64
POLR2J3-215ENST00000511313 MAP1SQ66K74 1059 aaPredicted RBP11.05□□□□□ -0.64
POLR2J3-215ENST00000511313 SMC5Q8IY18 1101 aa11.05□□□□□ -0.64
POLR2J3-215ENST00000511313 STAG1Q8WVM7 1258 aa11.05□□□□□ -0.64
POLR2J3-215ENST00000511313 KIFC2Q96AC6 838 aa11.05□□□□□ -0.64
POLR2J3-215ENST00000511313 C8orf76Q96K31 380 aa11.05□□□□□ -0.64
POLR2J3-215ENST00000511313 FAM50BQ9Y247 325 aa11.05□□□□□ -0.64
POLR2J3-215ENST00000511313 KLRG2A4D1S0 409 aaPredicted RBP11.04□□□□□ -0.64
POLR2J3-215ENST00000511313 STAM2O75886 525 aa11.04□□□□□ -0.64
POLR2J3-215ENST00000511313 RARBP10826 455 aa11.04□□□□□ -0.64
POLR2J3-215ENST00000511313 C1QTNF8P60827 252 aa11.04□□□□□ -0.64
POLR2J3-215ENST00000511313 TFDP1Q14186 410 aa11.04□□□□□ -0.64
POLR2J3-215ENST00000511313 ALX1Q15699 326 aa11.04□□□□□ -0.64
POLR2J3-215ENST00000511313 IFNL3Q8IZI9 196 aa11.04□□□□□ -0.64
POLR2J3-215ENST00000511313 STK11IPQ8N1F8 1099 aa11.04□□□□□ -0.64
POLR2J3-215ENST00000511313 FAM163AQ96GL9 167 aaPredicted RBP11.04□□□□□ -0.64
POLR2J3-215ENST00000511313 IWS1Q96ST2 819 aa11.04□□□□□ -0.64
POLR2J3-215ENST00000511313 MKRN1Q9UHC7 482 aaKnown RBP11.04□□□□□ -0.64
POLR2J3-215ENST00000511313 SLC45A1Q9Y2W3 748 aa11.04□□□□□ -0.64
POLR2J3-215ENST00000511313 GPR75-ASB3A0A0A6YYF3 556 aa11.04□□□□□ -0.64
POLR2J3-215ENST00000511313 ALAS1P13196 640 aa11.04□□□□□ -0.64
POLR2J3-215ENST00000511313 RBM25P49756 843 aaKnown RBP11.04□□□□□ -0.64
POLR2J3-215ENST00000511313 NEK4P51957 841 aa11.04□□□□□ -0.64
POLR2J3-215ENST00000511313 IFT74Q96LB3 600 aa11.04□□□□□ -0.64
POLR2J3-215ENST00000511313 PRC1O43663 620 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms