RNA–Protein interactions for RNA: ENST00000509599.5

PTPN20-221, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-221ENST00000509599 FOXO4P98177 505 aa12.19□□□□□ -0.46
PTPN20-221ENST00000509599 NHLH1Q02575 133 aa12.19□□□□□ -0.46
PTPN20-221ENST00000509599 FBXO33Q7Z6M2 555 aa12.19□□□□□ -0.46
PTPN20-221ENST00000509599 BBXQ8WY36 941 aaPredicted RBP12.19□□□□□ -0.46
PTPN20-221ENST00000509599 DDX20Q9UHI6 824 aaKnown RBP12.19□□□□□ -0.46
PTPN20-221ENST00000509599 SMCHD1A6NHR9 2005 aa12.19□□□□□ -0.46
PTPN20-221ENST00000509599 ZNF318Q5VUA4 2279 aa12.18□□□□□ -0.46
PTPN20-221ENST00000509599 MAST3O60307 1309 aa12.18□□□□□ -0.46
PTPN20-221ENST00000509599 SMIM22K7EJ46 135 aa12.18□□□□□ -0.46
PTPN20-221ENST00000509599 MAP3K10Q02779 954 aa12.18□□□□□ -0.46
PTPN20-221ENST00000509599 MORN1Q5T089 497 aa12.18□□□□□ -0.46
PTPN20-221ENST00000509599 GJC2Q5T442 439 aaPredicted RBP12.18□□□□□ -0.46
PTPN20-221ENST00000509599 LDHAL6AQ6ZMR3 332 aa12.18□□□□□ -0.46
PTPN20-221ENST00000509599 APBA2Q99767 749 aa12.18□□□□□ -0.46
PTPN20-221ENST00000509599 EPAS1Q99814 870 aa12.18□□□□□ -0.46
PTPN20-221ENST00000509599 PBX4Q9BYU1 374 aa12.18□□□□□ -0.46
PTPN20-221ENST00000509599 TXNRD2Q9NNW7 524 aa12.18□□□□□ -0.46
PTPN20-221ENST00000509599 GRXCR1A8MXD5 290 aa12.17□□□□□ -0.46
PTPN20-221ENST00000509599 CTNND1O60716 968 aaKnown RBP12.17□□□□□ -0.46
PTPN20-221ENST00000509599 RGS2P41220 211 aa12.17□□□□□ -0.46
PTPN20-221ENST00000509599 DDX12PQ92771 950 aa12.17□□□□□ -0.46
PTPN20-221ENST00000509599 CNNM1Q9NRU3 951 aa12.17□□□□□ -0.46
PTPN20-221ENST00000509599 FLRT1Q9NZU1 646 aa12.17□□□□□ -0.46
PTPN20-221ENST00000509599 KIAA1468Q9P260 1216 aa12.17□□□□□ -0.46
PTPN20-221ENST00000509599 SUGT1Q9Y2Z0 365 aa12.17□□□□□ -0.46
PTPN20-221ENST00000509599 CHMP3Q9Y3E7 222 aa12.17□□□□□ -0.46
PTPN20-221ENST00000509599 CFAP54Q96N23 3096 aa12.17□□□□□ -0.46
PTPN20-221ENST00000509599 CLSPNQ9HAW4 1339 aa12.16□□□□□ -0.46
PTPN20-221ENST00000509599 SPTBN4Q9H254 2564 aa12.16□□□□□ -0.46
PTPN20-221ENST00000509599 MSCO60682 206 aa12.16□□□□□ -0.46
PTPN20-221ENST00000509599 HMGCS2P54868 508 aa12.16□□□□□ -0.46
PTPN20-221ENST00000509599 TLE2Q04725 743 aa12.16□□□□□ -0.46
PTPN20-221ENST00000509599 SPP2Q13103 211 aa12.16□□□□□ -0.46
PTPN20-221ENST00000509599 AAK1Q2M2I8 961 aa12.16□□□□□ -0.46
PTPN20-221ENST00000509599 C6orf132Q5T0Z8 1188 aa12.16□□□□□ -0.46
PTPN20-221ENST00000509599 SH3BP5LQ7L8J4 393 aa12.16□□□□□ -0.46
PTPN20-221ENST00000509599 C8orf58Q8NAV2 365 aa12.16□□□□□ -0.46
PTPN20-221ENST00000509599 PORCNQ9H237 461 aa12.16□□□□□ -0.46
PTPN20-221ENST00000509599 LRRFIP2Q9Y608 721 aaKnown RBP12.16□□□□□ -0.46
PTPN20-221ENST00000509599 UTYO14607 1347 aa12.15□□□□□ -0.46
PTPN20-221ENST00000509599 ZNF853P0CG23 659 aa12.15□□□□□ -0.46
PTPN20-221ENST00000509599 CNGA1P29973 690 aa12.15□□□□□ -0.46
PTPN20-221ENST00000509599 MAPK4P31152 587 aa12.15□□□□□ -0.46
PTPN20-221ENST00000509599 FPGSQ05932 587 aa12.15□□□□□ -0.46
PTPN20-221ENST00000509599 PABPC4Q13310 644 aaKnown RBP eCLIP12.15□□□□□ -0.46
PTPN20-221ENST00000509599 DIXDC1Q155Q3 683 aa12.15□□□□□ -0.46
PTPN20-221ENST00000509599 C1orf53Q5VUE5 145 aa12.15□□□□□ -0.46
PTPN20-221ENST00000509599 GPR142Q7Z601 462 aa12.15□□□□□ -0.46
PTPN20-221ENST00000509599 VPS37DQ86XT2 251 aa12.15□□□□□ -0.46
PTPN20-221ENST00000509599 TRPV1Q8NER1 839 aa12.15□□□□□ -0.46
PTPN20-221ENST00000509599 GPRC5AQ8NFJ5 357 aa12.15□□□□□ -0.46
PTPN20-221ENST00000509599 CACNA1FO60840 1977 aa12.14□□□□□ -0.47
PTPN20-221ENST00000509599 PI4K2BG5E9Z4 385 aa12.14□□□□□ -0.47
PTPN20-221ENST00000509599 KIAA0355O15063 1070 aa12.14□□□□□ -0.47
PTPN20-221ENST00000509599 ERC2O15083 957 aa12.14□□□□□ -0.47
PTPN20-221ENST00000509599 FRAT2O75474 233 aaPredicted RBP12.14□□□□□ -0.47
PTPN20-221ENST00000509599 Q3C1V9 767 aa12.14□□□□□ -0.47
PTPN20-221ENST00000509599 EPHA10Q5JZY3 1008 aa12.14□□□□□ -0.47
PTPN20-221ENST00000509599 CCDC30Q5VVM6 783 aa12.14□□□□□ -0.47
PTPN20-221ENST00000509599 MFSD14CQ5VZR4 134 aa12.14□□□□□ -0.47
PTPN20-221ENST00000509599 LAPTM4BQ86VI4 370 aa12.14□□□□□ -0.47
PTPN20-221ENST00000509599 CCDC146Q8IYE0 955 aa12.14□□□□□ -0.47
PTPN20-221ENST00000509599 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.14□□□□□ -0.47
PTPN20-221ENST00000509599 TACC3Q9Y6A5 838 aa12.14□□□□□ -0.47
PTPN20-221ENST00000509599 PRR33A8MZF0 331 aa12.13□□□□□ -0.47
PTPN20-221ENST00000509599 KBTBD13C9JR72 458 aa12.13□□□□□ -0.47
PTPN20-221ENST00000509599 TLL1O43897 1013 aa12.13□□□□□ -0.47
PTPN20-221ENST00000509599 CLTBP09497 229 aa12.13□□□□□ -0.47
PTPN20-221ENST00000509599 RAG1P15918 1043 aa12.13□□□□□ -0.47
PTPN20-221ENST00000509599 ADCYAP1R1P41586 468 aa12.13□□□□□ -0.47
PTPN20-221ENST00000509599 RGS3P49796 1198 aa12.13□□□□□ -0.47
PTPN20-221ENST00000509599 MAP2K5Q13163 448 aa12.13□□□□□ -0.47
PTPN20-221ENST00000509599 LMBR1LQ6UX01 489 aa12.13□□□□□ -0.47
PTPN20-221ENST00000509599 CCDC129Q6ZRS4 1044 aa12.13□□□□□ -0.47
PTPN20-221ENST00000509599 G2E3Q7L622 706 aa12.13□□□□□ -0.47
PTPN20-221ENST00000509599 PLEKHH3Q7Z736 793 aa12.13□□□□□ -0.47
PTPN20-221ENST00000509599 ARRDC4Q8NCT1 418 aa12.13□□□□□ -0.47
PTPN20-221ENST00000509599 ZNF280CQ8ND82 737 aa12.13□□□□□ -0.47
PTPN20-221ENST00000509599 FERMT2Q96AC1 680 aa12.13□□□□□ -0.47
PTPN20-221ENST00000509599 PUS3Q9BZE2 481 aaKnown RBP12.13□□□□□ -0.47
PTPN20-221ENST00000509599 CD320Q9NPF0 282 aa12.13□□□□□ -0.47
PTPN20-221ENST00000509599 USP40Q9NVE5 1235 aa12.13□□□□□ -0.47
PTPN20-221ENST00000509599 RBPJLQ9UBG7 517 aa12.13□□□□□ -0.47
PTPN20-221ENST00000509599 SEPT9Q9UHD8 586 aaPredicted RBP12.13□□□□□ -0.47
PTPN20-221ENST00000509599 RFX7Q2KHR2 1363 aa12.13□□□□□ -0.47
PTPN20-221ENST00000509599 USP34Q70CQ2 3546 aa12.12□□□□□ -0.47
PTPN20-221ENST00000509599 DDTLA6NHG4 134 aaPredicted RBP12.12□□□□□ -0.47
PTPN20-221ENST00000509599 HERVK_113P62684 666 aa12.12□□□□□ -0.47
PTPN20-221ENST00000509599 IRX3P78415 501 aaPredicted RBP12.12□□□□□ -0.47
PTPN20-221ENST00000509599 CCDC57Q2TAC2 916 aa12.12□□□□□ -0.47
PTPN20-221ENST00000509599 TAF7LQ5H9L4 462 aa12.12□□□□□ -0.47
PTPN20-221ENST00000509599 SH3D19Q5HYK7 790 aa12.12□□□□□ -0.47
PTPN20-221ENST00000509599 RASIP1Q5U651 963 aa12.12□□□□□ -0.47
PTPN20-221ENST00000509599 ANO1Q5XXA6 986 aa12.12□□□□□ -0.47
PTPN20-221ENST00000509599 MICALL1Q8N3F8 863 aa12.12□□□□□ -0.47
PTPN20-221ENST00000509599 FBXL18Q96ME1 805 aa12.12□□□□□ -0.47
PTPN20-221ENST00000509599 MYH16Q9H6N6 1097 aa12.12□□□□□ -0.47
PTPN20-221ENST00000509599 MYBBP1AQ9BQG0 1328 aaKnown RBP12.11□□□□□ -0.47
PTPN20-221ENST00000509599 A0A0G2JMZ2 1700 aa12.11□□□□□ -0.47
PTPN20-221ENST00000509599 ENTPD3O75355 529 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms