RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 C20orf194Q5TEA3 1177 aa18.6■□□□□ 0.57
TPM3-219ENST00000509409 UBE2Q1Q7Z7E8 422 aa18.6■□□□□ 0.57
TPM3-219ENST00000509409 LCORLQ8N3X6 602 aa18.6■□□□□ 0.57
TPM3-219ENST00000509409 ACER1Q8TDN7 264 aa18.6■□□□□ 0.57
TPM3-219ENST00000509409 SDR42E1Q8WUS8 393 aa18.6■□□□□ 0.57
TPM3-219ENST00000509409 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.6■□□□□ 0.57
TPM3-219ENST00000509409 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.6■□□□□ 0.57
TPM3-219ENST00000509409 ARMT1Q9H993 441 aa18.6■□□□□ 0.57
TPM3-219ENST00000509409 HMX1Q9NP08 348 aaPredicted RBP18.6■□□□□ 0.57
TPM3-219ENST00000509409 PAK6Q9NQU5 681 aaPredicted RBP18.6■□□□□ 0.57
TPM3-219ENST00000509409 NR2E3Q9Y5X4 410 aa18.6■□□□□ 0.57
TPM3-219ENST00000509409 MGAMO43451 1857 aa18.6■□□□□ 0.57
TPM3-219ENST00000509409 RPTORQ8N122 1335 aa18.59■□□□□ 0.57
TPM3-219ENST00000509409 ATAD5Q96QE3 1844 aa18.59■□□□□ 0.57
TPM3-219ENST00000509409 TCRBV5S4A2TA0A5A2 114 aa18.59■□□□□ 0.57
TPM3-219ENST00000509409 ATP5JP18859 108 aa18.59■□□□□ 0.57
TPM3-219ENST00000509409 TRIM32Q13049 653 aa18.59■□□□□ 0.57
TPM3-219ENST00000509409 C12orf42Q96LP6 360 aa18.59■□□□□ 0.57
TPM3-219ENST00000509409 LRRCC1Q9C099 1032 aa18.59■□□□□ 0.57
TPM3-219ENST00000509409 KIAA1683Q9H0B3 1180 aa18.59■□□□□ 0.57
TPM3-219ENST00000509409 SIPA1L1O43166 1804 aa18.58■□□□□ 0.57
TPM3-219ENST00000509409 SEPT2Q15019 361 aa18.58■□□□□ 0.56
TPM3-219ENST00000509409 WDR78Q5VTH9 848 aa18.58■□□□□ 0.56
TPM3-219ENST00000509409 CATSPERGQ6ZRH7 1159 aa18.58■□□□□ 0.56
TPM3-219ENST00000509409 PLEKHH3Q7Z736 793 aa18.58■□□□□ 0.56
TPM3-219ENST00000509409 SOCS4Q8WXH5 440 aa18.58■□□□□ 0.56
TPM3-219ENST00000509409 DCP1AQ9NPI6 582 aaPredicted RBP18.58■□□□□ 0.56
TPM3-219ENST00000509409 RABGAP1Q9Y3P9 1069 aa18.58■□□□□ 0.56
TPM3-219ENST00000509409 LOC285556D6RIA3 1793 aa18.58■□□□□ 0.56
TPM3-219ENST00000509409 SMARCA5O60264 1052 aaPredicted RBP18.57■□□□□ 0.56
TPM3-219ENST00000509409 MBD4O95243 580 aa18.57■□□□□ 0.56
TPM3-219ENST00000509409 CYP2D6P10635 497 aa18.57■□□□□ 0.56
TPM3-219ENST00000509409 ADD2P35612 726 aa18.57■□□□□ 0.56
TPM3-219ENST00000509409 CCNA1P78396 465 aa18.57■□□□□ 0.56
TPM3-219ENST00000509409 GABPAQ06546 454 aa18.57■□□□□ 0.56
TPM3-219ENST00000509409 SLFNL1Q499Z3 407 aa18.57■□□□□ 0.56
TPM3-219ENST00000509409 CHRDL2Q6WN34 429 aa18.57■□□□□ 0.56
TPM3-219ENST00000509409 GPR142Q7Z601 462 aa18.57■□□□□ 0.56
TPM3-219ENST00000509409 PAWRQ96IZ0 340 aaKnown RBP18.57■□□□□ 0.56
TPM3-219ENST00000509409 HAUS7Q99871 368 aa18.57■□□□□ 0.56
TPM3-219ENST00000509409 CRISPLD2Q9H0B8 497 aa18.57■□□□□ 0.56
TPM3-219ENST00000509409 PORCNQ9H237 461 aa18.57■□□□□ 0.56
TPM3-219ENST00000509409 PRKAB2O43741 272 aa18.56■□□□□ 0.56
TPM3-219ENST00000509409 EVI5O60447 810 aa18.56■□□□□ 0.56
TPM3-219ENST00000509409 GLRX3O76003 335 aaKnown RBP18.56■□□□□ 0.56
TPM3-219ENST00000509409 XRCC5P13010 732 aaKnown RBP18.56■□□□□ 0.56
TPM3-219ENST00000509409 VCAM1P19320 739 aa18.56■□□□□ 0.56
TPM3-219ENST00000509409 GUCY1A2P33402 732 aa18.56■□□□□ 0.56
TPM3-219ENST00000509409 RGS2P41220 211 aa18.56■□□□□ 0.56
TPM3-219ENST00000509409 EVX2Q03828 476 aa18.56■□□□□ 0.56
TPM3-219ENST00000509409 NECAB2Q7Z6G3 386 aa18.56■□□□□ 0.56
TPM3-219ENST00000509409 AMOTL1Q8IY63 956 aa18.56■□□□□ 0.56
TPM3-219ENST00000509409 TRMT44Q8IYL2 757 aaKnown RBP18.56■□□□□ 0.56
TPM3-219ENST00000509409 TRIB2Q92519 343 aa18.56■□□□□ 0.56
TPM3-219ENST00000509409 DDRGK1Q96HY6 314 aa18.56■□□□□ 0.56
TPM3-219ENST00000509409 RPAP3Q9H6T3 665 aaPredicted RBP18.56■□□□□ 0.56
TPM3-219ENST00000509409 ATP8A2Q9NTI2 1148 aa18.56■□□□□ 0.56
TPM3-219ENST00000509409 SWAP70Q9UH65 585 aa18.56■□□□□ 0.56
TPM3-219ENST00000509409 ZKSCAN1P17029 563 aaPredicted RBP18.55■□□□□ 0.56
TPM3-219ENST00000509409 ZSCAN25Q6NSZ9 544 aa18.55■□□□□ 0.56
TPM3-219ENST00000509409 POTEEQ6S8J3 1075 aa18.55■□□□□ 0.56
TPM3-219ENST00000509409 DYNLL2Q96FJ2 89 aa18.55■□□□□ 0.56
TPM3-219ENST00000509409 MYH1P12882 1939 aa18.55■□□□□ 0.56
TPM3-219ENST00000509409 CDK5RAP2Q96SN8 1893 aa18.54■□□□□ 0.56
TPM3-219ENST00000509409 DOCK3Q8IZD9 2030 aa18.54■□□□□ 0.56
TPM3-219ENST00000509409 FOCADQ5VW36 1801 aa18.54■□□□□ 0.56
TPM3-219ENST00000509409 CNMDO75829 334 aa18.54■□□□□ 0.56
TPM3-219ENST00000509409 PRKAR2AP13861 404 aaKnown RBP18.54■□□□□ 0.56
TPM3-219ENST00000509409 SLC44A5Q8NCS7 719 aa18.54■□□□□ 0.56
TPM3-219ENST00000509409 FXR1P51114 621 aaKnown RBP eCLIP18.53■□□□□ 0.56
TPM3-219ENST00000509409 UBE3CQ15386 1083 aa18.53■□□□□ 0.56
TPM3-219ENST00000509409 MORN1Q5T089 497 aa18.53■□□□□ 0.56
TPM3-219ENST00000509409 TMEM179Q6ZVK1 233 aa18.53■□□□□ 0.56
TPM3-219ENST00000509409 ANKLE1Q8NAG6 615 aa18.53■□□□□ 0.56
TPM3-219ENST00000509409 DIS3LQ8TF46 1054 aaKnown RBP18.53■□□□□ 0.56
TPM3-219ENST00000509409 USP6NLQ92738 828 aa18.53■□□□□ 0.56
TPM3-219ENST00000509409 HOXC10Q9NYD6 342 aa18.53■□□□□ 0.56
TPM3-219ENST00000509409 SLC4A4Q9Y6R1 1079 aa18.53■□□□□ 0.56
TPM3-219ENST00000509409 IVNS1ABPQ9Y6Y0 642 aa18.53■□□□□ 0.56
TPM3-219ENST00000509409 A0A1W2PRG0 241 aa18.52■□□□□ 0.56
TPM3-219ENST00000509409 USP17L12C9JPN9 530 aa18.52■□□□□ 0.56
TPM3-219ENST00000509409 USP17L21D6R901 530 aa18.52■□□□□ 0.56
TPM3-219ENST00000509409 CHGBP05060 677 aa18.52■□□□□ 0.56
TPM3-219ENST00000509409 CACNB2Q08289 660 aaPredicted RBP18.52■□□□□ 0.56
TPM3-219ENST00000509409 MAP2K5Q13163 448 aa18.52■□□□□ 0.56
TPM3-219ENST00000509409 COG2Q14746 738 aa18.52■□□□□ 0.56
TPM3-219ENST00000509409 CCL14Q16627 93 aa18.52■□□□□ 0.56
TPM3-219ENST00000509409 TANGO6Q9C0B7 1094 aa18.52■□□□□ 0.56
TPM3-219ENST00000509409 NBPF3Q9H094 633 aa18.52■□□□□ 0.56
TPM3-219ENST00000509409 BTBD7Q9P203 1132 aa18.52■□□□□ 0.56
TPM3-219ENST00000509409 CYP2D7A0A087X1C5 515 aa18.51■□□□□ 0.55
TPM3-219ENST00000509409 SPDYE16A6NNV3 312 aaPredicted RBP18.51■□□□□ 0.55
TPM3-219ENST00000509409 AKR1B1P15121 316 aa18.51■□□□□ 0.55
TPM3-219ENST00000509409 CDK8P49336 464 aa18.51■□□□□ 0.55
TPM3-219ENST00000509409 SAMD1Q6SPF0 538 aaPredicted RBP18.51■□□□□ 0.55
TPM3-219ENST00000509409 LBX2Q6XYB7 198 aa18.51■□□□□ 0.55
TPM3-219ENST00000509409 GPATCH3Q96I76 525 aa18.51■□□□□ 0.55
TPM3-219ENST00000509409 APBA2Q99767 749 aa18.51■□□□□ 0.55
TPM3-219ENST00000509409 ARHGEF10LQ9HCE6 1279 aa18.51■□□□□ 0.55
TPM3-219ENST00000509409 ECHDC1Q9NTX5 307 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms