RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 GUCY1A2P33402 732 aa13.23□□□□□ -0.29
RNF4-212ENST00000509258 SHMT1P34896 483 aa13.23□□□□□ -0.29
RNF4-212ENST00000509258 USP5P45974 858 aa13.23□□□□□ -0.29
RNF4-212ENST00000509258 TATDN1Q6P1N9 297 aa13.23□□□□□ -0.29
RNF4-212ENST00000509258 TMED8Q6PL24 325 aaPredicted RBP13.23□□□□□ -0.29
RNF4-212ENST00000509258 PAWRQ96IZ0 340 aaKnown RBP13.23□□□□□ -0.29
RNF4-212ENST00000509258 HAUS7Q99871 368 aa13.23□□□□□ -0.29
RNF4-212ENST00000509258 ARMT1Q9H993 441 aa13.23□□□□□ -0.29
RNF4-212ENST00000509258 HMX1Q9NP08 348 aaPredicted RBP13.23□□□□□ -0.29
RNF4-212ENST00000509258 PAG1Q9NWQ8 432 aa13.23□□□□□ -0.29
RNF4-212ENST00000509258 GJD2Q9UKL4 321 aa13.23□□□□□ -0.29
RNF4-212ENST00000509258 GREB1LQ9C091 1923 aaPredicted RBP13.23□□□□□ -0.29
RNF4-212ENST00000509258 COL11A1P12107 1806 aaPredicted RBP13.23□□□□□ -0.29
RNF4-212ENST00000509258 USP17L10C9JJH3 530 aa13.22□□□□□ -0.29
RNF4-212ENST00000509258 ADD2P35612 726 aa13.22□□□□□ -0.29
RNF4-212ENST00000509258 HERVK_113P62684 666 aa13.22□□□□□ -0.29
RNF4-212ENST00000509258 GABPAQ06546 454 aa13.22□□□□□ -0.29
RNF4-212ENST00000509258 SLC44A5Q8NCS7 719 aa13.22□□□□□ -0.29
RNF4-212ENST00000509258 GPRC5AQ8NFJ5 357 aa13.22□□□□□ -0.29
RNF4-212ENST00000509258 DIS3LQ8TF46 1054 aaKnown RBP13.22□□□□□ -0.29
RNF4-212ENST00000509258 GTF3C2Q8WUA4 911 aaPredicted RBP13.22□□□□□ -0.29
RNF4-212ENST00000509258 TXNRD2Q9NNW7 524 aa13.22□□□□□ -0.29
RNF4-212ENST00000509258 EMILIN3Q9NT22 766 aa13.22□□□□□ -0.29
RNF4-212ENST00000509258 CYP2D7A0A087X1C5 515 aa13.21□□□□□ -0.29
RNF4-212ENST00000509258 TTF1Q15361 905 aaPredicted RBP13.21□□□□□ -0.29
RNF4-212ENST00000509258 ACER1Q8TDN7 264 aa13.21□□□□□ -0.29
RNF4-212ENST00000509258 OTUD7AQ8TE49 926 aaPredicted RBP13.21□□□□□ -0.29
RNF4-212ENST00000509258 TRIB2Q92519 343 aa13.21□□□□□ -0.29
RNF4-212ENST00000509258 P2RX7Q99572 595 aaKnown RBP13.21□□□□□ -0.29
RNF4-212ENST00000509258 NUDT12Q9BQG2 462 aa13.21□□□□□ -0.29
RNF4-212ENST00000509258 LRRCC1Q9C099 1032 aa13.21□□□□□ -0.29
RNF4-212ENST00000509258 NBPF3Q9H094 633 aa13.21□□□□□ -0.29
RNF4-212ENST00000509258 EHD4Q9H223 541 aa13.21□□□□□ -0.29
RNF4-212ENST00000509258 DCTPP1Q9H773 170 aa13.21□□□□□ -0.29
RNF4-212ENST00000509258 DCP1AQ9NPI6 582 aaPredicted RBP13.21□□□□□ -0.29
RNF4-212ENST00000509258 SERPINB13Q9UIV8 391 aa13.21□□□□□ -0.29
RNF4-212ENST00000509258 A0A0G2JMZ2 1700 aa13.21□□□□□ -0.3
RNF4-212ENST00000509258 ZNFX1Q9P2E3 1918 aaKnown RBP13.21□□□□□ -0.3
RNF4-212ENST00000509258 FRMPD3Q5JV73 1810 aa13.2□□□□□ -0.3
RNF4-212ENST00000509258 MBD4O95243 580 aa13.2□□□□□ -0.3
RNF4-212ENST00000509258 XRCC5P13010 732 aaKnown RBP13.2□□□□□ -0.3
RNF4-212ENST00000509258 MAPK4P31152 587 aa13.2□□□□□ -0.3
RNF4-212ENST00000509258 MAP3K21Q5TCX8 1036 aa13.2□□□□□ -0.3
RNF4-212ENST00000509258 CLEC10AQ8IUN9 316 aa13.2□□□□□ -0.3
RNF4-212ENST00000509258 CCAR1Q8IX12 1150 aaKnown RBP13.2□□□□□ -0.3
RNF4-212ENST00000509258 TRMT44Q8IYL2 757 aaKnown RBP13.2□□□□□ -0.3
RNF4-212ENST00000509258 DYNLL2Q96FJ2 89 aa13.2□□□□□ -0.3
RNF4-212ENST00000509258 MYH4Q9Y623 1939 aa13.19□□□□□ -0.3
RNF4-212ENST00000509258 PRKAR2AP13861 404 aaKnown RBP13.19□□□□□ -0.3
RNF4-212ENST00000509258 ZKSCAN1P17029 563 aaPredicted RBP13.19□□□□□ -0.3
RNF4-212ENST00000509258 CYP2B6P20813 491 aa13.19□□□□□ -0.3
RNF4-212ENST00000509258 RRP1P56182 461 aaKnown RBP13.19□□□□□ -0.3
RNF4-212ENST00000509258 ERVK-9P63128 1117 aa13.19□□□□□ -0.3
RNF4-212ENST00000509258 ERVK-24P63145 666 aa13.19□□□□□ -0.3
RNF4-212ENST00000509258 TRIM32Q13049 653 aa13.19□□□□□ -0.3
RNF4-212ENST00000509258 ZYXQ15942 572 aaKnown RBP13.19□□□□□ -0.3
RNF4-212ENST00000509258 C7orf61Q8IZ16 206 aa13.19□□□□□ -0.3
RNF4-212ENST00000509258 FEZ1Q99689 392 aa13.19□□□□□ -0.3
RNF4-212ENST00000509258 PUS7LQ9H0K6 701 aaKnown RBP13.19□□□□□ -0.3
RNF4-212ENST00000509258 C11orf49Q9H6J7 331 aa13.19□□□□□ -0.3
RNF4-212ENST00000509258 MCM9Q9NXL9 1143 aa13.19□□□□□ -0.3
RNF4-212ENST00000509258 OGDHLQ9ULD0 1010 aa13.19□□□□□ -0.3
RNF4-212ENST00000509258 A0A1W2PRG0 241 aa13.18□□□□□ -0.3
RNF4-212ENST00000509258 RGS2P41220 211 aa13.18□□□□□ -0.3
RNF4-212ENST00000509258 SEPT2Q15019 361 aa13.18□□□□□ -0.3
RNF4-212ENST00000509258 Q3C1V9 767 aa13.18□□□□□ -0.3
RNF4-212ENST00000509258 CERKLQ49MI3 558 aaPredicted RBP13.18□□□□□ -0.3
RNF4-212ENST00000509258 KIAA1755Q5JYT7 1200 aa13.18□□□□□ -0.3
RNF4-212ENST00000509258 USP17L2Q6R6M4 530 aa13.18□□□□□ -0.3
RNF4-212ENST00000509258 C12orf42Q96LP6 360 aa13.18□□□□□ -0.3
RNF4-212ENST00000509258 CRBNQ96SW2 442 aa13.18□□□□□ -0.3
RNF4-212ENST00000509258 APBA2Q99767 749 aa13.18□□□□□ -0.3
RNF4-212ENST00000509258 PAGR1Q9BTK6 254 aa13.18□□□□□ -0.3
RNF4-212ENST00000509258 CRNKL1Q9BZJ0 848 aaKnown RBP13.18□□□□□ -0.3
RNF4-212ENST00000509258 CHMP4BQ9H444 224 aaKnown RBP13.18□□□□□ -0.3
RNF4-212ENST00000509258 RBPJLQ9UBG7 517 aa13.18□□□□□ -0.3
RNF4-212ENST00000509258 STAP2Q9UGK3 403 aa13.18□□□□□ -0.3
RNF4-212ENST00000509258 CNMDO75829 334 aa13.17□□□□□ -0.3
RNF4-212ENST00000509258 POLR3DP05423 398 aaPredicted RBP13.17□□□□□ -0.3
RNF4-212ENST00000509258 RAB3GAP1Q15042 981 aa13.17□□□□□ -0.3
RNF4-212ENST00000509258 ABCB5Q2M3G0 1257 aa13.17□□□□□ -0.3
RNF4-212ENST00000509258 GPR142Q7Z601 462 aa13.17□□□□□ -0.3
RNF4-212ENST00000509258 TTC6Q86TZ1 520 aa13.17□□□□□ -0.3
RNF4-212ENST00000509258 YTHDC1Q96MU7 727 aaKnown RBP13.17□□□□□ -0.3
RNF4-212ENST00000509258 PORCNQ9H237 461 aa13.17□□□□□ -0.3
RNF4-212ENST00000509258 CWC22Q9HCG8 908 aaKnown RBP13.17□□□□□ -0.3
RNF4-212ENST00000509258 SOX1O00570 391 aaPredicted RBP13.16□□□□□ -0.3
RNF4-212ENST00000509258 AKR1B1P15121 316 aa13.16□□□□□ -0.3
RNF4-212ENST00000509258 BMP8BP34820 402 aa13.16□□□□□ -0.3
RNF4-212ENST00000509258 MNX1P50219 401 aaPredicted RBP13.16□□□□□ -0.3
RNF4-212ENST00000509258 USP14P54578 494 aa13.16□□□□□ -0.3
RNF4-212ENST00000509258 CCNA1P78396 465 aa13.16□□□□□ -0.3
RNF4-212ENST00000509258 UBE3CQ15386 1083 aa13.16□□□□□ -0.3
RNF4-212ENST00000509258 PLEKHH3Q7Z736 793 aa13.16□□□□□ -0.3
RNF4-212ENST00000509258 SIAH1Q8IUQ4 282 aa13.16□□□□□ -0.3
RNF4-212ENST00000509258 USP6NLQ92738 828 aa13.16□□□□□ -0.3
RNF4-212ENST00000509258 GDF15Q99988 308 aa13.16□□□□□ -0.3
RNF4-212ENST00000509258 CABP5Q9NP86 173 aa13.16□□□□□ -0.3
RNF4-212ENST00000509258 ECHDC1Q9NTX5 307 aa13.16□□□□□ -0.3
RNF4-212ENST00000509258 ZMYND8Q9ULU4 1186 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms