RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 KIAA1755Q5JYT7 1200 aa21.76■■□□□ 1.07
CLDND1-220ENST00000508902 OTOP1Q7RTM1 612 aa21.76■■□□□ 1.07
CLDND1-220ENST00000508902 AS3MTQ9HBK9 375 aa21.76■■□□□ 1.07
CLDND1-220ENST00000508902 HELLSQ9NRZ9 838 aa21.76■■□□□ 1.07
CLDND1-220ENST00000508902 LAMA4Q16363 1823 aa21.76■■□□□ 1.07
CLDND1-220ENST00000508902 MINDY4BA8MYZ0 360 aa21.75■■□□□ 1.07
CLDND1-220ENST00000508902 USP17L10C9JJH3 530 aa21.75■■□□□ 1.07
CLDND1-220ENST00000508902 RASA1P20936 1047 aa21.75■■□□□ 1.07
CLDND1-220ENST00000508902 TDO2P48775 406 aa21.75■■□□□ 1.07
CLDND1-220ENST00000508902 PEX10O60683 326 aa21.74■■□□□ 1.07
CLDND1-220ENST00000508902 ZYXQ15942 572 aaKnown RBP21.74■■□□□ 1.07
CLDND1-220ENST00000508902 MCMDC2Q4G0Z9 681 aa21.74■■□□□ 1.07
CLDND1-220ENST00000508902 C12orf42Q96LP6 360 aa21.74■■□□□ 1.07
CLDND1-220ENST00000508902 PARK7Q99497 189 aaKnown RBP21.74■■□□□ 1.07
CLDND1-220ENST00000508902 BRCA2P51587 3418 aa21.73■■□□□ 1.07
CLDND1-220ENST00000508902 MPHOSPH10O00566 681 aaKnown RBP21.73■■□□□ 1.07
CLDND1-220ENST00000508902 ECM2O94769 699 aaPredicted RBP21.73■■□□□ 1.07
CLDND1-220ENST00000508902 APPP05067 770 aa21.73■■□□□ 1.07
CLDND1-220ENST00000508902 NKX2-3Q8TAU0 364 aa21.73■■□□□ 1.07
CLDND1-220ENST00000508902 DDRGK1Q96HY6 314 aa21.73■■□□□ 1.07
CLDND1-220ENST00000508902 KIAA1683Q9H0B3 1180 aa21.73■■□□□ 1.07
CLDND1-220ENST00000508902 ASCC2Q9H1I8 757 aaPredicted RBP21.73■■□□□ 1.07
CLDND1-220ENST00000508902 INCENPQ9NQS7 918 aa21.73■■□□□ 1.07
CLDND1-220ENST00000508902 TAOK2Q9UL54 1235 aa21.73■■□□□ 1.07
CLDND1-220ENST00000508902 CCDC171Q6TFL3 1326 aa21.73■■□□□ 1.07
CLDND1-220ENST00000508902 MYH4Q9Y623 1939 aa21.72■■□□□ 1.07
CLDND1-220ENST00000508902 PRDM1O75626 825 aa21.72■■□□□ 1.07
CLDND1-220ENST00000508902 LACTBP83111 547 aaPredicted RBP21.72■■□□□ 1.07
CLDND1-220ENST00000508902 TMEM179Q6ZVK1 233 aa21.72■■□□□ 1.07
CLDND1-220ENST00000508902 TICAM2Q86XR7 235 aa21.72■■□□□ 1.07
CLDND1-220ENST00000508902 NBPF3Q9H094 633 aa21.72■■□□□ 1.07
CLDND1-220ENST00000508902 CABP5Q9NP86 173 aa21.72■■□□□ 1.07
CLDND1-220ENST00000508902 A0A0G2JMZ2 1700 aa21.72■■□□□ 1.07
CLDND1-220ENST00000508902 PLXNB2O15031 1838 aa21.71■■□□□ 1.07
CLDND1-220ENST00000508902 IGKV6D-41A0A0C4DH26 115 aa21.71■■□□□ 1.07
CLDND1-220ENST00000508902 C19orf81C9J6K1 198 aa21.71■■□□□ 1.07
CLDND1-220ENST00000508902 HSPD1P10809 573 aaKnown RBP21.71■■□□□ 1.07
CLDND1-220ENST00000508902 PPARAQ07869 468 aa21.71■■□□□ 1.07
CLDND1-220ENST00000508902 USP17L2Q6R6M4 530 aa21.71■■□□□ 1.07
CLDND1-220ENST00000508902 ERO1AQ96HE7 468 aa21.71■■□□□ 1.07
CLDND1-220ENST00000508902 NAPBQ9H115 298 aa21.71■■□□□ 1.07
CLDND1-220ENST00000508902 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.71■■□□□ 1.07
CLDND1-220ENST00000508902 TRIM17Q9Y577 477 aa21.71■■□□□ 1.07
CLDND1-220ENST00000508902 VCAM1P19320 739 aa21.7■■□□□ 1.06
CLDND1-220ENST00000508902 HOXA7P31268 230 aaPredicted RBP21.7■■□□□ 1.06
CLDND1-220ENST00000508902 CTDSPL2Q05D32 466 aa21.7■■□□□ 1.06
CLDND1-220ENST00000508902 ALX1Q15699 326 aa21.7■■□□□ 1.06
CLDND1-220ENST00000508902 TRIM47Q96LD4 638 aa21.7■■□□□ 1.06
CLDND1-220ENST00000508902 CCDC17Q96LX7 622 aa21.7■■□□□ 1.06
CLDND1-220ENST00000508902 CAPN15O75808 1086 aa21.69■■□□□ 1.06
CLDND1-220ENST00000508902 FGAP02671 866 aa21.69■■□□□ 1.06
CLDND1-220ENST00000508902 ICA1Q05084 483 aa21.69■■□□□ 1.06
CLDND1-220ENST00000508902 CWC27Q6UX04 472 aaKnown RBP21.69■■□□□ 1.06
CLDND1-220ENST00000508902 AMOTL1Q8IY63 956 aa21.69■■□□□ 1.06
CLDND1-220ENST00000508902 P2RX7Q99572 595 aaKnown RBP21.69■■□□□ 1.06
CLDND1-220ENST00000508902 FEZ1Q99689 392 aa21.69■■□□□ 1.06
CLDND1-220ENST00000508902 TXNRD2Q9NNW7 524 aa21.69■■□□□ 1.06
CLDND1-220ENST00000508902 TMOD4Q9NZQ9 345 aa21.69■■□□□ 1.06
CLDND1-220ENST00000508902 HPS5Q9UPZ3 1129 aa21.69■■□□□ 1.06
CLDND1-220ENST00000508902 CENPQQ7L2Z9 268 aaPredicted RBP21.68■■□□□ 1.06
CLDND1-220ENST00000508902 NACAP1Q9BZK3 213 aa21.68■■□□□ 1.06
CLDND1-220ENST00000508902 EFCC1Q9HA90 598 aa21.68■■□□□ 1.06
CLDND1-220ENST00000508902 PLIN4Q96Q06 1357 aa21.68■■□□□ 1.06
CLDND1-220ENST00000508902 ZMYM6O95789 1325 aa21.67■■□□□ 1.06
CLDND1-220ENST00000508902 EEF2P13639 858 aaKnown RBP21.67■■□□□ 1.06
CLDND1-220ENST00000508902 FBXO46Q6PJ61 603 aaPredicted RBP21.67■■□□□ 1.06
CLDND1-220ENST00000508902 ANKRD13CQ8N6S4 541 aa21.67■■□□□ 1.06
CLDND1-220ENST00000508902 ANAPC4Q9UJX5 808 aa21.67■■□□□ 1.06
CLDND1-220ENST00000508902 PTPN22Q9Y2R2 807 aa21.67■■□□□ 1.06
CLDND1-220ENST00000508902 TMX2Q9Y320 296 aa21.67■■□□□ 1.06
CLDND1-220ENST00000508902 CNMDO75829 334 aa21.66■■□□□ 1.06
CLDND1-220ENST00000508902 HERVK_113P62684 666 aa21.66■■□□□ 1.06
CLDND1-220ENST00000508902 SMCR8Q8TEV9 937 aaPredicted RBP21.66■■□□□ 1.06
CLDND1-220ENST00000508902 DIAPH3Q9NSV4 1193 aa21.66■■□□□ 1.06
CLDND1-220ENST00000508902 COL11A1P12107 1806 aaPredicted RBP21.65■■□□□ 1.06
CLDND1-220ENST00000508902 FGRP09769 529 aa21.65■■□□□ 1.06
CLDND1-220ENST00000508902 CHMLP26374 656 aa21.65■■□□□ 1.06
CLDND1-220ENST00000508902 PSMC4P43686 418 aa21.65■■□□□ 1.06
CLDND1-220ENST00000508902 FAM47AQ5JRC9 791 aa21.65■■□□□ 1.06
CLDND1-220ENST00000508902 CATSPERGQ6ZRH7 1159 aa21.65■■□□□ 1.06
CLDND1-220ENST00000508902 TBC1D10CQ8IV04 446 aa21.65■■□□□ 1.06
CLDND1-220ENST00000508902 RPAP3Q9H6T3 665 aaPredicted RBP21.65■■□□□ 1.06
CLDND1-220ENST00000508902 RBPJLQ9UBG7 517 aa21.65■■□□□ 1.06
CLDND1-220ENST00000508902 PNMA3Q9UL41 463 aa21.65■■□□□ 1.06
CLDND1-220ENST00000508902 PTCH2Q9Y6C5 1203 aa21.65■■□□□ 1.06
CLDND1-220ENST00000508902 OSBPP22059 807 aa21.64■■□□□ 1.05
CLDND1-220ENST00000508902 USP14P54578 494 aa21.64■■□□□ 1.05
CLDND1-220ENST00000508902 HAND2P61296 217 aa21.64■■□□□ 1.05
CLDND1-220ENST00000508902 PKN2Q16513 984 aaKnown RBP21.64■■□□□ 1.05
CLDND1-220ENST00000508902 FAM110CQ1W6H9 321 aa21.64■■□□□ 1.05
CLDND1-220ENST00000508902 SPICE1Q8N0Z3 855 aa21.64■■□□□ 1.05
CLDND1-220ENST00000508902 CEP95Q96GE4 821 aa21.64■■□□□ 1.05
CLDND1-220ENST00000508902 VCPKMTQ9H867 229 aa21.64■■□□□ 1.05
CLDND1-220ENST00000508902 MKNK2Q9HBH9 465 aa21.64■■□□□ 1.05
CLDND1-220ENST00000508902 MORF4L1Q9UBU8 362 aa21.64■■□□□ 1.05
CLDND1-220ENST00000508902 IRX3P78415 501 aaPredicted RBP21.63■■□□□ 1.05
CLDND1-220ENST00000508902 PABPC4Q13310 644 aaKnown RBP eCLIP21.63■■□□□ 1.05
CLDND1-220ENST00000508902 Q3C1V9 767 aa21.63■■□□□ 1.05
CLDND1-220ENST00000508902 KANSL2Q9H9L4 492 aa21.63■■□□□ 1.05
CLDND1-220ENST00000508902 GABRQQ9UN88 632 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms