RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 GUCY1A2P33402 732 aa12.67□□□□□ -0.38
SH3RF1-203ENST00000508685 USP5P45974 858 aa12.67□□□□□ -0.38
SH3RF1-203ENST00000508685 KCNJ6P48051 423 aa12.67□□□□□ -0.38
SH3RF1-203ENST00000508685 RTN1Q16799 776 aa12.67□□□□□ -0.38
SH3RF1-203ENST00000508685 FAM47AQ5JRC9 791 aa12.67□□□□□ -0.38
SH3RF1-203ENST00000508685 PPP4R3BQ5MIZ7 849 aa12.67□□□□□ -0.38
SH3RF1-203ENST00000508685 UTP14CQ5TAP6 766 aaKnown RBP12.67□□□□□ -0.38
SH3RF1-203ENST00000508685 CEP135Q66GS9 1140 aa12.67□□□□□ -0.38
SH3RF1-203ENST00000508685 TIGD1Q96MW7 591 aa12.67□□□□□ -0.38
SH3RF1-203ENST00000508685 MTA3Q9BTC8 594 aa12.67□□□□□ -0.38
SH3RF1-203ENST00000508685 OSBPL5Q9H0X9 879 aaPredicted RBP12.67□□□□□ -0.38
SH3RF1-203ENST00000508685 KIAA1468Q9P260 1216 aa12.67□□□□□ -0.38
SH3RF1-203ENST00000508685 CGNQ9P2M7 1197 aaKnown RBP12.67□□□□□ -0.38
SH3RF1-203ENST00000508685 SPTLC2O15270 562 aa12.67□□□□□ -0.38
SH3RF1-203ENST00000508685 IFNAR1P17181 557 aa12.67□□□□□ -0.38
SH3RF1-203ENST00000508685 PDE6BP35913 854 aa12.67□□□□□ -0.38
SH3RF1-203ENST00000508685 GSTO1P78417 241 aa12.67□□□□□ -0.38
SH3RF1-203ENST00000508685 KIF23Q02241 960 aaPredicted RBP12.67□□□□□ -0.38
SH3RF1-203ENST00000508685 PTPN14Q15678 1187 aa12.67□□□□□ -0.38
SH3RF1-203ENST00000508685 TMC4Q7Z404 712 aa12.67□□□□□ -0.38
SH3RF1-203ENST00000508685 TMTC2Q8N394 836 aa12.67□□□□□ -0.38
SH3RF1-203ENST00000508685 TGFBRAP1Q8WUH2 860 aa12.67□□□□□ -0.38
SH3RF1-203ENST00000508685 C16orf45Q96MC5 204 aaPredicted RBP12.67□□□□□ -0.38
SH3RF1-203ENST00000508685 MYO1BO43795 1136 aa12.66□□□□□ -0.38
SH3RF1-203ENST00000508685 BAG3O95817 575 aa12.66□□□□□ -0.38
SH3RF1-203ENST00000508685 PCP11498 1178 aaKnown RBP12.66□□□□□ -0.38
SH3RF1-203ENST00000508685 SKILP12757 684 aa12.66□□□□□ -0.38
SH3RF1-203ENST00000508685 BTDP43251 543 aa12.66□□□□□ -0.38
SH3RF1-203ENST00000508685 GTF2IP78347 998 aa12.66□□□□□ -0.38
SH3RF1-203ENST00000508685 CCDC144BQ3MJ40 725 aa12.66□□□□□ -0.38
SH3RF1-203ENST00000508685 SBK1Q52WX2 424 aa12.66□□□□□ -0.38
SH3RF1-203ENST00000508685 IFIT1BQ5T764 474 aaKnown RBP12.66□□□□□ -0.38
SH3RF1-203ENST00000508685 KRT40Q6A162 431 aa12.66□□□□□ -0.38
SH3RF1-203ENST00000508685 IQCA1Q86XH1 822 aa12.66□□□□□ -0.38
SH3RF1-203ENST00000508685 JMYQ8N9B5 988 aa12.66□□□□□ -0.38
SH3RF1-203ENST00000508685 FANCBQ8NB91 859 aa12.66□□□□□ -0.38
SH3RF1-203ENST00000508685 CCDC150Q8NCX0 1101 aa12.66□□□□□ -0.38
SH3RF1-203ENST00000508685 PKNOX2Q96KN3 472 aa12.66□□□□□ -0.38
SH3RF1-203ENST00000508685 GTPBP4Q9BZE4 634 aaKnown RBP12.66□□□□□ -0.38
SH3RF1-203ENST00000508685 ORC4O43929 436 aa12.66□□□□□ -0.38
SH3RF1-203ENST00000508685 FMNL1O95466 1100 aaPredicted RBP12.66□□□□□ -0.38
SH3RF1-203ENST00000508685 CMA1P23946 247 aa12.66□□□□□ -0.38
SH3RF1-203ENST00000508685 SSRP1Q08945 709 aaKnown RBP12.66□□□□□ -0.38
SH3RF1-203ENST00000508685 MYSM1Q5VVJ2 828 aa12.66□□□□□ -0.38
SH3RF1-203ENST00000508685 DPP8Q6V1X1 898 aaPredicted RBP12.66□□□□□ -0.38
SH3RF1-203ENST00000508685 NBPF11Q86T75 865 aa12.66□□□□□ -0.38
SH3RF1-203ENST00000508685 MAPKAPK5Q8IW41 473 aa12.66□□□□□ -0.38
SH3RF1-203ENST00000508685 ZNF622Q969S3 477 aaKnown RBP eCLIP12.66□□□□□ -0.38
SH3RF1-203ENST00000508685 DYNLL2Q96FJ2 89 aa12.66□□□□□ -0.38
SH3RF1-203ENST00000508685 MASTLQ96GX5 879 aa12.66□□□□□ -0.38
SH3RF1-203ENST00000508685 CLIC4Q9Y696 253 aa12.66□□□□□ -0.38
SH3RF1-203ENST00000508685 STK36Q9NRP7 1315 aa12.65□□□□□ -0.38
SH3RF1-203ENST00000508685 CCP110O43303 1012 aa12.65□□□□□ -0.38
SH3RF1-203ENST00000508685 ALDH1B1P30837 517 aa12.65□□□□□ -0.38
SH3RF1-203ENST00000508685 NLRP12P59046 1061 aa12.65□□□□□ -0.38
SH3RF1-203ENST00000508685 PPP4CP60510 307 aa12.65□□□□□ -0.38
SH3RF1-203ENST00000508685 PDE4BQ07343 736 aa12.65□□□□□ -0.38
SH3RF1-203ENST00000508685 DOK7Q18PE1 504 aa12.65□□□□□ -0.38
SH3RF1-203ENST00000508685 C12orf60Q5U649 245 aa12.65□□□□□ -0.38
SH3RF1-203ENST00000508685 NYAP1Q6ZVC0 841 aa12.65□□□□□ -0.38
SH3RF1-203ENST00000508685 FBXW7Q969H0 707 aa12.65□□□□□ -0.38
SH3RF1-203ENST00000508685 NOL10Q9BSC4 688 aaKnown RBP12.65□□□□□ -0.38
SH3RF1-203ENST00000508685 SAP30BPQ9UHR5 308 aaKnown RBP12.65□□□□□ -0.38
SH3RF1-203ENST00000508685 SLC3A2P08195 630 aaKnown RBP12.64□□□□□ -0.39
SH3RF1-203ENST00000508685 PLCD1P51178 756 aa12.64□□□□□ -0.39
SH3RF1-203ENST00000508685 TROAPQ12815 778 aa12.64□□□□□ -0.39
SH3RF1-203ENST00000508685 ANO1Q5XXA6 986 aa12.64□□□□□ -0.39
SH3RF1-203ENST00000508685 CRACR2BQ8N4Y2 399 aaPredicted RBP12.64□□□□□ -0.39
SH3RF1-203ENST00000508685 AOPEPQ8N6M6 819 aa12.64□□□□□ -0.39
SH3RF1-203ENST00000508685 SLC44A5Q8NCS7 719 aa12.64□□□□□ -0.39
SH3RF1-203ENST00000508685 TSC1Q92574 1164 aa12.64□□□□□ -0.39
SH3RF1-203ENST00000508685 MXD3Q9BW11 206 aa12.64□□□□□ -0.39
SH3RF1-203ENST00000508685 ZC3H12CQ9C0D7 883 aaKnown RBP12.64□□□□□ -0.39
SH3RF1-203ENST00000508685 NAV1Q8NEY1 1877 aa12.64□□□□□ -0.39
SH3RF1-203ENST00000508685 GPR75-ASB3A0A0A6YYF3 556 aa12.64□□□□□ -0.39
SH3RF1-203ENST00000508685 TSPY2A6NKD2 308 aa12.64□□□□□ -0.39
SH3RF1-203ENST00000508685 F8W031 263 aaPredicted RBP12.64□□□□□ -0.39
SH3RF1-203ENST00000508685 IKBKBO14920 756 aa12.64□□□□□ -0.39
SH3RF1-203ENST00000508685 IGSF3O75054 1194 aa12.64□□□□□ -0.39
SH3RF1-203ENST00000508685 PPP6R2O75170 966 aa12.64□□□□□ -0.39
SH3RF1-203ENST00000508685 LDHCP07864 332 aa12.64□□□□□ -0.39
SH3RF1-203ENST00000508685 RCAN1P53805 252 aa12.64□□□□□ -0.39
SH3RF1-203ENST00000508685 CATIPQ7Z7H3 387 aa12.64□□□□□ -0.39
SH3RF1-203ENST00000508685 C2CD5Q86YS7 1000 aa12.64□□□□□ -0.39
SH3RF1-203ENST00000508685 CERS5Q8N5B7 392 aa12.64□□□□□ -0.39
SH3RF1-203ENST00000508685 KIF18AQ8NI77 898 aa12.64□□□□□ -0.39
SH3RF1-203ENST00000508685 TBC1D22AQ8WUA7 517 aa12.64□□□□□ -0.39
SH3RF1-203ENST00000508685 COA1Q9GZY4 146 aa12.64□□□□□ -0.39
SH3RF1-203ENST00000508685 OGFRQ9NZT2 677 aa12.64□□□□□ -0.39
SH3RF1-203ENST00000508685 FAM205AQ6ZU69 1335 aa12.63□□□□□ -0.39
SH3RF1-203ENST00000508685 CCDC196A0A1B0GTZ2 297 aa12.63□□□□□ -0.39
SH3RF1-203ENST00000508685 hCG_1642624A0A1W2PR95 340 aa12.63□□□□□ -0.39
SH3RF1-203ENST00000508685 PLEKHA8P1O95397 391 aa12.63□□□□□ -0.39
SH3RF1-203ENST00000508685 CHRNA5P30532 468 aa12.63□□□□□ -0.39
SH3RF1-203ENST00000508685 NDUFA8P51970 172 aa12.63□□□□□ -0.39
SH3RF1-203ENST00000508685 RHBDL3P58872 404 aa12.63□□□□□ -0.39
SH3RF1-203ENST00000508685 CCZ1BP86790 482 aa12.63□□□□□ -0.39
SH3RF1-203ENST00000508685 CCZ1P86791 482 aaPredicted RBP12.63□□□□□ -0.39
SH3RF1-203ENST00000508685 NCBP1Q09161 790 aaKnown RBP12.63□□□□□ -0.39
SH3RF1-203ENST00000508685 TRIM29Q14134 588 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms