RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 CHURC1-FNTBB4DL54 471 aa9.18□□□□□ -0.94
TOPBP1-206ENST00000508524 RNASE1P07998 156 aaKnown RBP9.18□□□□□ -0.94
TOPBP1-206ENST00000508524 ITGB5P18084 799 aa9.18□□□□□ -0.94
TOPBP1-206ENST00000508524 ZNF76P36508 570 aa9.18□□□□□ -0.94
TOPBP1-206ENST00000508524 KIR3DL1P43629 444 aa9.18□□□□□ -0.94
TOPBP1-206ENST00000508524 FANCCQ00597 558 aa9.18□□□□□ -0.94
TOPBP1-206ENST00000508524 TNK2Q07912 1038 aa9.18□□□□□ -0.94
TOPBP1-206ENST00000508524 IKZF1Q13422 519 aa9.18□□□□□ -0.94
TOPBP1-206ENST00000508524 CDKAL1Q5VV42 579 aa9.18□□□□□ -0.94
TOPBP1-206ENST00000508524 BRMS1Q9HCU9 246 aa9.18□□□□□ -0.94
TOPBP1-206ENST00000508524 UBP1Q9NZI7 540 aa9.18□□□□□ -0.94
TOPBP1-206ENST00000508524 KLHL3Q9UH77 587 aa9.18□□□□□ -0.94
TOPBP1-206ENST00000508524 RECKO95980 971 aa9.17□□□□□ -0.94
TOPBP1-206ENST00000508524 Q96M66 194 aa9.17□□□□□ -0.94
TOPBP1-206ENST00000508524 ATP13A1Q9HD20 1204 aa9.17□□□□□ -0.94
TOPBP1-206ENST00000508524 METTL5Q9NRN9 209 aaKnown RBP9.17□□□□□ -0.94
TOPBP1-206ENST00000508524 H3BS24 57 aa9.16□□□□□ -0.94
TOPBP1-206ENST00000508524 VAMP1P23763 118 aa9.16□□□□□ -0.94
TOPBP1-206ENST00000508524 PI4K2BQ8TCG2 481 aa9.16□□□□□ -0.94
TOPBP1-206ENST00000508524 PRDM7Q9NQW5 492 aa9.16□□□□□ -0.94
TOPBP1-206ENST00000508524 ATE1O95260 518 aa9.15□□□□□ -0.94
TOPBP1-206ENST00000508524 ZP2Q05996 745 aa9.15□□□□□ -0.94
TOPBP1-206ENST00000508524 SLC23A3Q6PIS1 610 aa9.15□□□□□ -0.94
TOPBP1-206ENST00000508524 RC3H2Q9HBD1 1191 aaKnown RBP9.15□□□□□ -0.94
TOPBP1-206ENST00000508524 PCDHB14Q9Y5E9 798 aa9.15□□□□□ -0.94
TOPBP1-206ENST00000508524 PAPLNO95428 1278 aa9.14□□□□□ -0.95
TOPBP1-206ENST00000508524 SEZ6Q53EL9 994 aa9.14□□□□□ -0.95
TOPBP1-206ENST00000508524 THAP5Q7Z6K1 395 aa9.14□□□□□ -0.95
TOPBP1-206ENST00000508524 LRRN4CLQ8ND94 238 aa9.14□□□□□ -0.95
TOPBP1-206ENST00000508524 BAHD1Q8TBE0 780 aaPredicted RBP9.14□□□□□ -0.95
TOPBP1-206ENST00000508524 PIWIL2Q8TC59 973 aaKnown RBP9.14□□□□□ -0.95
TOPBP1-206ENST00000508524 EAF1Q96JC9 268 aaPredicted RBP9.14□□□□□ -0.95
TOPBP1-206ENST00000508524 NT5C1AQ9BXI3 368 aa9.14□□□□□ -0.95
TOPBP1-206ENST00000508524 EHMT1Q9H9B1 1298 aa9.14□□□□□ -0.95
TOPBP1-206ENST00000508524 SLC22A31A6NKX4 558 aa9.13□□□□□ -0.95
TOPBP1-206ENST00000508524 PAX4O43316 350 aa9.13□□□□□ -0.95
TOPBP1-206ENST00000508524 APOBRQ0VD83 1088 aa9.13□□□□□ -0.95
TOPBP1-206ENST00000508524 ZNF394Q53GI3 561 aa9.13□□□□□ -0.95
TOPBP1-206ENST00000508524 SPON2Q9BUD6 331 aa9.13□□□□□ -0.95
TOPBP1-206ENST00000508524 LMCD1Q9NZU5 365 aa9.13□□□□□ -0.95
TOPBP1-206ENST00000508524 JUNBP17275 347 aaPredicted RBP9.12□□□□□ -0.95
TOPBP1-206ENST00000508524 USP48Q86UV5 1035 aa9.12□□□□□ -0.95
TOPBP1-206ENST00000508524 KIAA0825Q8IV33 1275 aa9.12□□□□□ -0.95
TOPBP1-206ENST00000508524 SLITRK4Q8IW52 837 aa9.12□□□□□ -0.95
TOPBP1-206ENST00000508524 DTWD2Q8NBA8 298 aa9.12□□□□□ -0.95
TOPBP1-206ENST00000508524 RNF141Q8WVD5 230 aa9.12□□□□□ -0.95
TOPBP1-206ENST00000508524 CCDC74BQ96LY2 380 aa9.12□□□□□ -0.95
TOPBP1-206ENST00000508524 FMNL2Q96PY5 1086 aa9.12□□□□□ -0.95
TOPBP1-206ENST00000508524 CARS2Q9HA77 564 aaKnown RBP9.12□□□□□ -0.95
TOPBP1-206ENST00000508524 GMIPQ9P107 970 aa9.12□□□□□ -0.95
TOPBP1-206ENST00000508524 PCDHGB7Q9Y5F8 929 aa9.12□□□□□ -0.95
TOPBP1-206ENST00000508524 CLCQ05315 142 aa9.11□□□□□ -0.95
TOPBP1-206ENST00000508524 PHACTR4Q8IZ21 702 aa9.11□□□□□ -0.95
TOPBP1-206ENST00000508524 REXO1Q8N1G1 1221 aaKnown RBP9.11□□□□□ -0.95
TOPBP1-206ENST00000508524 RGS22Q8NE09 1264 aa9.11□□□□□ -0.95
TOPBP1-206ENST00000508524 UBE2FQ969M7 185 aa9.11□□□□□ -0.95
TOPBP1-206ENST00000508524 KIF2CQ99661 725 aa9.11□□□□□ -0.95
TOPBP1-206ENST00000508524 DUSP15Q9H1R2 295 aaPredicted RBP9.11□□□□□ -0.95
TOPBP1-206ENST00000508524 ZSWIM5Q9P217 1185 aa9.11□□□□□ -0.95
TOPBP1-206ENST00000508524 RGS13O14921 159 aa9.1□□□□□ -0.95
TOPBP1-206ENST00000508524 TNNI2P48788 182 aa9.1□□□□□ -0.95
TOPBP1-206ENST00000508524 MLECQ14165 292 aa9.1□□□□□ -0.95
TOPBP1-206ENST00000508524 ARSHQ5FYA8 562 aa9.1□□□□□ -0.95
TOPBP1-206ENST00000508524 OVOS1Q6IE37 1185 aa9.1□□□□□ -0.95
TOPBP1-206ENST00000508524 ATG4DQ86TL0 474 aaPredicted RBP9.1□□□□□ -0.95
TOPBP1-206ENST00000508524 NKD1Q969G9 470 aa9.1□□□□□ -0.95
TOPBP1-206ENST00000508524 RNF34Q969K3 372 aa9.1□□□□□ -0.95
TOPBP1-206ENST00000508524 KREMEN1Q96MU8 473 aa9.1□□□□□ -0.95
TOPBP1-206ENST00000508524 KRTAP9-2Q9BYQ4 174 aa9.1□□□□□ -0.95
TOPBP1-206ENST00000508524 WASH4PA8MWX3 477 aa9.09□□□□□ -0.95
TOPBP1-206ENST00000508524 SCAMP3O14828 347 aaKnown RBP9.09□□□□□ -0.95
TOPBP1-206ENST00000508524 LRRN2O75325 713 aa9.09□□□□□ -0.95
TOPBP1-206ENST00000508524 UBOX5O94941 541 aa9.09□□□□□ -0.95
TOPBP1-206ENST00000508524 SRFP11831 508 aa9.09□□□□□ -0.95
TOPBP1-206ENST00000508524 GK5Q6ZS86 529 aa9.09□□□□□ -0.95
TOPBP1-206ENST00000508524 VWCEQ96DN2 955 aa9.09□□□□□ -0.95
TOPBP1-206ENST00000508524 KIAA1522Q9P206 1035 aaPredicted RBP9.09□□□□□ -0.95
TOPBP1-206ENST00000508524 RNF114Q9Y508 228 aa9.09□□□□□ -0.95
TOPBP1-206ENST00000508524 RACK1P63244 317 aaKnown RBP9.08□□□□□ -0.96
TOPBP1-206ENST00000508524 CDCP2Q5VXM1 449 aa9.08□□□□□ -0.96
TOPBP1-206ENST00000508524 METTL16Q86W50 562 aaKnown RBP9.08□□□□□ -0.96
TOPBP1-206ENST00000508524 MRRFQ96E11 262 aaKnown RBP9.08□□□□□ -0.96
TOPBP1-206ENST00000508524 ASPNQ9BXN1 380 aa9.08□□□□□ -0.96
TOPBP1-206ENST00000508524 GPR62Q9BZJ7 368 aa9.08□□□□□ -0.96
TOPBP1-206ENST00000508524 DDX41Q9UJV9 622 aaKnown RBP9.08□□□□□ -0.96
TOPBP1-206ENST00000508524 UNCXA6NJT0 531 aa9.07□□□□□ -0.96
TOPBP1-206ENST00000508524 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.07□□□□□ -0.96
TOPBP1-206ENST00000508524 ESR1P03372 595 aa9.07□□□□□ -0.96
TOPBP1-206ENST00000508524 RAG1P15918 1043 aa9.07□□□□□ -0.96
TOPBP1-206ENST00000508524 MCM4P33991 863 aa9.07□□□□□ -0.96
TOPBP1-206ENST00000508524 ZNF165P49910 485 aa9.07□□□□□ -0.96
TOPBP1-206ENST00000508524 GAB4Q2WGN9 574 aa9.07□□□□□ -0.96
TOPBP1-206ENST00000508524 TMPRSS7Q7RTY8 843 aa9.07□□□□□ -0.96
TOPBP1-206ENST00000508524 FLAD1Q8NFF5 587 aa9.07□□□□□ -0.96
TOPBP1-206ENST00000508524 ATG4CQ96DT6 458 aa9.07□□□□□ -0.96
TOPBP1-206ENST00000508524 ASIC4Q96FT7 647 aa9.07□□□□□ -0.96
TOPBP1-206ENST00000508524 ANTXR1Q9H6X2 564 aa9.07□□□□□ -0.96
TOPBP1-206ENST00000508524 CNNM2Q9H8M5 875 aa9.07□□□□□ -0.96
TOPBP1-206ENST00000508524 KCNH3Q9ULD8 1083 aa9.07□□□□□ -0.96
TOPBP1-206ENST00000508524 CARMIL2Q6F5E8 1435 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms