RNA–Protein interactions for RNA: ENST00000508382.1

SGCA-206, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-206ENST00000508382 HIP1O00291 1037 aa16.28■□□□□ 0.2
SGCA-206ENST00000508382 ENTPD3O75355 529 aa16.28■□□□□ 0.2
SGCA-206ENST00000508382 RFX5P48382 616 aaPredicted RBP16.28■□□□□ 0.2
SGCA-206ENST00000508382 Q3C1V9 767 aa16.28■□□□□ 0.2
SGCA-206ENST00000508382 AACSQ86V21 672 aa16.28■□□□□ 0.2
SGCA-206ENST00000508382 TICAM2Q86XR7 235 aa16.28■□□□□ 0.2
SGCA-206ENST00000508382 WDR66Q8TBY9 1149 aa16.28■□□□□ 0.2
SGCA-206ENST00000508382 BCL11AQ9H165 835 aa16.28■□□□□ 0.2
SGCA-206ENST00000508382 MCCP23508 829 aa16.27■□□□□ 0.2
SGCA-206ENST00000508382 MORN1Q5T089 497 aa16.27■□□□□ 0.2
SGCA-206ENST00000508382 PI4K2BQ8TCG2 481 aa16.27■□□□□ 0.2
SGCA-206ENST00000508382 PORCNQ9H237 461 aa16.27■□□□□ 0.2
SGCA-206ENST00000508382 FLRT1Q9NZU1 646 aa16.27■□□□□ 0.2
SGCA-206ENST00000508382 PA2G4Q9UQ80 394 aaKnown RBP16.27■□□□□ 0.2
SGCA-206ENST00000508382 XIRP2A4UGR9 3374 aa16.27■□□□□ 0.19
SGCA-206ENST00000508382 EPHB4P54760 987 aa16.26■□□□□ 0.19
SGCA-206ENST00000508382 SH3RF1Q7Z6J0 888 aa16.26■□□□□ 0.19
SGCA-206ENST00000508382 ZSCAN29Q8IWY8 852 aaPredicted RBP16.26■□□□□ 0.19
SGCA-206ENST00000508382 ZNF280CQ8ND82 737 aa16.26■□□□□ 0.19
SGCA-206ENST00000508382 RUFY2Q8WXA3 655 aa16.26■□□□□ 0.19
SGCA-206ENST00000508382 SOCS4Q8WXH5 440 aa16.26■□□□□ 0.19
SGCA-206ENST00000508382 P2RX7Q99572 595 aaKnown RBP16.26■□□□□ 0.19
SGCA-206ENST00000508382 ATP11BQ9Y2G3 1177 aa16.26■□□□□ 0.19
SGCA-206ENST00000508382 PLXNA1Q9UIW2 1896 aa16.26■□□□□ 0.19
SGCA-206ENST00000508382 CHD9Q3L8U1 2897 aa16.26■□□□□ 0.19
SGCA-206ENST00000508382 GAKO14976 1311 aa16.25■□□□□ 0.19
SGCA-206ENST00000508382 ITGB8P26012 769 aa16.25■□□□□ 0.19
SGCA-206ENST00000508382 SH3D19Q5HYK7 790 aa16.25■□□□□ 0.19
SGCA-206ENST00000508382 ADAMTS19Q8TE59 1207 aa16.25■□□□□ 0.19
SGCA-206ENST00000508382 RILPL2Q969X0 211 aa16.25■□□□□ 0.19
SGCA-206ENST00000508382 EVI5LQ96CN4 794 aa16.25■□□□□ 0.19
SGCA-206ENST00000508382 RBPJLQ9UBG7 517 aa16.25■□□□□ 0.19
SGCA-206ENST00000508382 TRIM43BA6NCK2 446 aa16.24■□□□□ 0.19
SGCA-206ENST00000508382 EYA2O00167 538 aa16.24■□□□□ 0.19
SGCA-206ENST00000508382 PUM3Q15397 648 aaKnown RBP16.24■□□□□ 0.19
SGCA-206ENST00000508382 GPR142Q7Z601 462 aa16.24■□□□□ 0.19
SGCA-206ENST00000508382 HSCBQ8IWL3 235 aa16.24■□□□□ 0.19
SGCA-206ENST00000508382 TRMT44Q8IYL2 757 aaKnown RBP16.24■□□□□ 0.19
SGCA-206ENST00000508382 TRIM43Q96BQ3 446 aaPredicted RBP16.24■□□□□ 0.19
SGCA-206ENST00000508382 SIL1Q9H173 461 aa16.24■□□□□ 0.19
SGCA-206ENST00000508382 PDLIM7Q9NR12 457 aa16.24■□□□□ 0.19
SGCA-206ENST00000508382 PRKAG2Q9UGJ0 569 aa16.24■□□□□ 0.19
SGCA-206ENST00000508382 LDHBP07195 334 aaKnown RBP16.23■□□□□ 0.19
SGCA-206ENST00000508382 CHMLP26374 656 aa16.23■□□□□ 0.19
SGCA-206ENST00000508382 PICALMQ13492 652 aa16.23■□□□□ 0.19
SGCA-206ENST00000508382 RABEP1Q15276 862 aa16.23■□□□□ 0.19
SGCA-206ENST00000508382 TNNI3KQ59H18 835 aa16.23■□□□□ 0.19
SGCA-206ENST00000508382 TRPV1Q8NER1 839 aa16.23■□□□□ 0.19
SGCA-206ENST00000508382 SNX21Q969T3 373 aa16.23■□□□□ 0.19
SGCA-206ENST00000508382 ASB2Q96Q27 587 aa16.23■□□□□ 0.19
SGCA-206ENST00000508382 APBA2Q99767 749 aa16.23■□□□□ 0.19
SGCA-206ENST00000508382 ESYT1Q9BSJ8 1104 aa16.23■□□□□ 0.19
SGCA-206ENST00000508382 PRDM5Q9NQX1 630 aaPredicted RBP16.23■□□□□ 0.19
SGCA-206ENST00000508382 DDX20Q9UHI6 824 aaKnown RBP16.23■□□□□ 0.19
SGCA-206ENST00000508382 AKAP2Q9Y2D5 859 aa16.23■□□□□ 0.19
SGCA-206ENST00000508382 FPGT-TNNI3KV9GXZ4 949 aa16.23■□□□□ 0.19
SGCA-206ENST00000508382 RAD50Q92878 1312 aa16.22■□□□□ 0.19
SGCA-206ENST00000508382 SYNGAP1Q96PV0 1343 aa16.22■□□□□ 0.19
SGCA-206ENST00000508382 DNM1LO00429 736 aa16.22■□□□□ 0.19
SGCA-206ENST00000508382 TBC1D12O60347 775 aa16.22■□□□□ 0.19
SGCA-206ENST00000508382 IFIT1P09914 478 aaKnown RBP16.22■□□□□ 0.19
SGCA-206ENST00000508382 RGS2P41220 211 aa16.22■□□□□ 0.19
SGCA-206ENST00000508382 HERVK_113P62684 666 aa16.22■□□□□ 0.19
SGCA-206ENST00000508382 PABPC4Q13310 644 aaKnown RBP eCLIP16.22■□□□□ 0.19
SGCA-206ENST00000508382 TRIM60Q495X7 471 aa16.22■□□□□ 0.19
SGCA-206ENST00000508382 GJC2Q5T442 439 aaPredicted RBP16.22■□□□□ 0.19
SGCA-206ENST00000508382 SLC39A5Q6ZMH5 540 aa16.22■□□□□ 0.19
SGCA-206ENST00000508382 GPRC5AQ8NFJ5 357 aa16.22■□□□□ 0.19
SGCA-206ENST00000508382 PPM1EQ8WY54 764 aa16.22■□□□□ 0.19
SGCA-206ENST00000508382 LPAR1Q92633 364 aa16.22■□□□□ 0.19
SGCA-206ENST00000508382 SALL1Q9NSC2 1324 aa16.21■□□□□ 0.19
SGCA-206ENST00000508382 GBF1Q92538 1859 aa16.21■□□□□ 0.19
SGCA-206ENST00000508382 ANAPC15P60006 121 aa16.21■□□□□ 0.19
SGCA-206ENST00000508382 JAG1P78504 1218 aa16.21■□□□□ 0.19
SGCA-206ENST00000508382 TSHZ3Q63HK5 1081 aa16.21■□□□□ 0.19
SGCA-206ENST00000508382 ATXN2LQ8WWM7 1075 aaKnown RBP16.21■□□□□ 0.19
SGCA-206ENST00000508382 EAF2Q96CJ1 260 aaPredicted RBP16.21■□□□□ 0.19
SGCA-206ENST00000508382 NECAB3Q96P71 396 aaPredicted RBP16.21■□□□□ 0.19
SGCA-206ENST00000508382 UHRF1Q96T88 793 aaPredicted RBP16.21■□□□□ 0.19
SGCA-206ENST00000508382 OSBPL5Q9H0X9 879 aaPredicted RBP16.21■□□□□ 0.19
SGCA-206ENST00000508382 DIAPH3Q9NSV4 1193 aa16.21■□□□□ 0.19
SGCA-206ENST00000508382 CDK5RAP2Q96SN8 1893 aa16.2■□□□□ 0.18
SGCA-206ENST00000508382 IGHA2P01877 340 aa16.2■□□□□ 0.18
SGCA-206ENST00000508382 ATP5JP18859 108 aa16.2■□□□□ 0.18
SGCA-206ENST00000508382 DNAJB2P25686 324 aa16.2■□□□□ 0.18
SGCA-206ENST00000508382 MAPK4P31152 587 aa16.2■□□□□ 0.18
SGCA-206ENST00000508382 HOXA7P31268 230 aaPredicted RBP16.2■□□□□ 0.18
SGCA-206ENST00000508382 CAP2P40123 477 aa16.2■□□□□ 0.18
SGCA-206ENST00000508382 RHBDL3P58872 404 aa16.2■□□□□ 0.18
SGCA-206ENST00000508382 ERVK-9P63128 1117 aa16.2■□□□□ 0.18
SGCA-206ENST00000508382 ERVK-24P63145 666 aa16.2■□□□□ 0.18
SGCA-206ENST00000508382 IRX3P78415 501 aaPredicted RBP16.2■□□□□ 0.18
SGCA-206ENST00000508382 MTMR2Q13614 643 aa16.2■□□□□ 0.18
SGCA-206ENST00000508382 SNX17Q15036 470 aa16.2■□□□□ 0.18
SGCA-206ENST00000508382 SHROOM1Q2M3G4 852 aaPredicted RBP16.2■□□□□ 0.18
SGCA-206ENST00000508382 PLEKHH3Q7Z736 793 aa16.2■□□□□ 0.18
SGCA-206ENST00000508382 USP26Q9BXU7 913 aa16.2■□□□□ 0.18
SGCA-206ENST00000508382 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.2■□□□□ 0.18
SGCA-206ENST00000508382 CEP126Q9P2H0 1117 aa16.2■□□□□ 0.18
SGCA-206ENST00000508382 NDUFB9Q9Y6M9 179 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms