RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 ASB16Q96NS5 453 aa8.45□□□□□ -1.06
TRAPPC13-209ENST00000508304 SP110Q9HB58 689 aa8.45□□□□□ -1.06
TRAPPC13-209ENST00000508304 TJP2Q9UDY2 1190 aa8.45□□□□□ -1.06
TRAPPC13-209ENST00000508304 WASH4PA8MWX3 477 aa8.44□□□□□ -1.06
TRAPPC13-209ENST00000508304 INHBBP09529 407 aa8.44□□□□□ -1.06
TRAPPC13-209ENST00000508304 RPS26P62854 115 aaKnown RBP8.44□□□□□ -1.06
TRAPPC13-209ENST00000508304 ATP2B2Q01814 1243 aa8.44□□□□□ -1.06
TRAPPC13-209ENST00000508304 GAB4Q2WGN9 574 aa8.44□□□□□ -1.06
TRAPPC13-209ENST00000508304 Q96M66 194 aa8.44□□□□□ -1.06
TRAPPC13-209ENST00000508304 ADAMTS10Q9H324 1103 aa8.44□□□□□ -1.06
TRAPPC13-209ENST00000508304 TTF2Q9UNY4 1162 aaKnown RBP8.44□□□□□ -1.06
TRAPPC13-209ENST00000508304 LINC00310P59036 64 aa8.43□□□□□ -1.06
TRAPPC13-209ENST00000508304 CREG2Q8IUH2 290 aa8.43□□□□□ -1.06
TRAPPC13-209ENST00000508304 KCNN1Q92952 543 aa8.43□□□□□ -1.06
TRAPPC13-209ENST00000508304 DPH2Q9BQC3 489 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC13-209ENST00000508304 KRTAP9-3Q9BYQ3 159 aa8.43□□□□□ -1.06
TRAPPC13-209ENST00000508304 DUSP15Q9H1R2 295 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC13-209ENST00000508304 PCDHB5Q9Y5E4 795 aa8.43□□□□□ -1.06
TRAPPC13-209ENST00000508304 BRD1O95696 1058 aa8.42□□□□□ -1.06
TRAPPC13-209ENST00000508304 ETV3P41162 512 aa8.42□□□□□ -1.06
TRAPPC13-209ENST00000508304 SEPT6Q14141 434 aa8.42□□□□□ -1.06
TRAPPC13-209ENST00000508304 SLC6A19Q695T7 634 aa8.42□□□□□ -1.06
TRAPPC13-209ENST00000508304 ERICH6Q7L0X2 663 aa8.42□□□□□ -1.06
TRAPPC13-209ENST00000508304 DNAJB8Q8NHS0 232 aa8.42□□□□□ -1.06
TRAPPC13-209ENST00000508304 RNF32Q9H0A6 362 aa8.42□□□□□ -1.06
TRAPPC13-209ENST00000508304 TPP2P29144 1249 aaPredicted RBP8.41□□□□□ -1.06
TRAPPC13-209ENST00000508304 TRHRP34981 398 aaPredicted RBP8.41□□□□□ -1.06
TRAPPC13-209ENST00000508304 TMEM87BQ96K49 555 aa8.41□□□□□ -1.06
TRAPPC13-209ENST00000508304 ARID3AQ99856 593 aa8.41□□□□□ -1.06
TRAPPC13-209ENST00000508304 NUAK1O60285 661 aa8.4□□□□□ -1.06
TRAPPC13-209ENST00000508304 PGRP06401 933 aa8.4□□□□□ -1.06
TRAPPC13-209ENST00000508304 BUD31P41223 144 aaPredicted RBP8.4□□□□□ -1.06
TRAPPC13-209ENST00000508304 FRMD6Q96NE9 622 aa8.4□□□□□ -1.06
TRAPPC13-209ENST00000508304 TRIT1Q9H3H1 467 aaKnown RBP8.4□□□□□ -1.06
TRAPPC13-209ENST00000508304 AGMOQ6ZNB7 445 aa8.39□□□□□ -1.07
TRAPPC13-209ENST00000508304 MCATQ8IVS2 390 aaKnown RBP8.39□□□□□ -1.07
TRAPPC13-209ENST00000508304 PDZD8Q8NEN9 1154 aa8.39□□□□□ -1.07
TRAPPC13-209ENST00000508304 ZGLP1P0C6A0 271 aa8.38□□□□□ -1.07
TRAPPC13-209ENST00000508304 CCDC85BQ15834 202 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC13-209ENST00000508304 IRF2BP1Q8IU81 584 aa8.38□□□□□ -1.07
TRAPPC13-209ENST00000508304 LILRA2Q8N149 483 aa8.38□□□□□ -1.07
TRAPPC13-209ENST00000508304 GPR62Q9BZJ7 368 aa8.38□□□□□ -1.07
TRAPPC13-209ENST00000508304 DUSP13Q9UII6 198 aa8.38□□□□□ -1.07
TRAPPC13-209ENST00000508304 CEP131Q9UPN4 1083 aa8.38□□□□□ -1.07
TRAPPC13-209ENST00000508304 P4HBP07237 508 aaKnown RBP8.37□□□□□ -1.07
TRAPPC13-209ENST00000508304 LMNB1P20700 586 aa8.37□□□□□ -1.07
TRAPPC13-209ENST00000508304 CTSWP56202 376 aa8.37□□□□□ -1.07
TRAPPC13-209ENST00000508304 PPP1R13LQ8WUF5 828 aa8.37□□□□□ -1.07
TRAPPC13-209ENST00000508304 ACSF2Q96CM8 615 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC13-209ENST00000508304 C20orf173Q96LM9 149 aa8.37□□□□□ -1.07
TRAPPC13-209ENST00000508304 MCOLN1Q9GZU1 580 aa8.37□□□□□ -1.07
TRAPPC13-209ENST00000508304 C19orf44Q9H6X5 657 aa8.37□□□□□ -1.07
TRAPPC13-209ENST00000508304 GPATCH2Q9NW75 528 aa8.37□□□□□ -1.07
TRAPPC13-209ENST00000508304 ADAM30Q9UKF2 790 aa8.37□□□□□ -1.07
TRAPPC13-209ENST00000508304 HOXA5P20719 270 aa8.36□□□□□ -1.07
TRAPPC13-209ENST00000508304 EIF4BP23588 611 aaKnown RBP8.36□□□□□ -1.07
TRAPPC13-209ENST00000508304 EGR3Q06889 387 aa8.36□□□□□ -1.07
TRAPPC13-209ENST00000508304 PDE4BQ07343 736 aa8.36□□□□□ -1.07
TRAPPC13-209ENST00000508304 TIGD5Q53EQ6 642 aa8.36□□□□□ -1.07
TRAPPC13-209ENST00000508304 TSPYL5Q86VY4 417 aaPredicted RBP8.36□□□□□ -1.07
TRAPPC13-209ENST00000508304 DTWD2Q8NBA8 298 aa8.36□□□□□ -1.07
TRAPPC13-209ENST00000508304 SLC6A17Q9H1V8 727 aa8.36□□□□□ -1.07
TRAPPC13-209ENST00000508304 LDHBP07195 334 aaKnown RBP8.35□□□□□ -1.07
TRAPPC13-209ENST00000508304 GNA15P30679 374 aa8.35□□□□□ -1.07
TRAPPC13-209ENST00000508304 LIG3P49916 1009 aa8.35□□□□□ -1.07
TRAPPC13-209ENST00000508304 NR0B2Q15466 257 aa8.35□□□□□ -1.07
TRAPPC13-209ENST00000508304 OXR1Q8N573 874 aa8.35□□□□□ -1.07
TRAPPC13-209ENST00000508304 IRF2BPLQ9H1B7 796 aa8.35□□□□□ -1.07
TRAPPC13-209ENST00000508304 MIR1-1HGQ9H1L0 117 aa8.35□□□□□ -1.07
TRAPPC13-209ENST00000508304 MYOCOSA0A1B0GUC4 107 aa8.34□□□□□ -1.07
TRAPPC13-209ENST00000508304 FITM1A5D6W6 292 aa8.34□□□□□ -1.07
TRAPPC13-209ENST00000508304 PEX10O60683 326 aa8.34□□□□□ -1.07
TRAPPC13-209ENST00000508304 DLG4P78352 724 aa8.34□□□□□ -1.07
TRAPPC13-209ENST00000508304 RPL6Q02878 288 aaKnown RBP8.34□□□□□ -1.07
TRAPPC13-209ENST00000508304 CWC22Q9HCG8 908 aaKnown RBP8.34□□□□□ -1.07
TRAPPC13-209ENST00000508304 SEMA7AO75326 666 aa8.33□□□□□ -1.08
TRAPPC13-209ENST00000508304 TFE3P19532 575 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC13-209ENST00000508304 TSNAXIP1Q2TAA8 658 aa8.33□□□□□ -1.08
TRAPPC13-209ENST00000508304 BAHD1Q8TBE0 780 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC13-209ENST00000508304 CYB5D2Q8WUJ1 264 aa8.33□□□□□ -1.08
TRAPPC13-209ENST00000508304 INTS4Q96HW7 963 aaKnown RBP8.33□□□□□ -1.08
TRAPPC13-209ENST00000508304 YBX2Q9Y2T7 364 aaKnown RBP8.33□□□□□ -1.08
TRAPPC13-209ENST00000508304 PCDHA11Q9Y5I1 949 aa8.33□□□□□ -1.08
TRAPPC13-209ENST00000508304 MAP3K11Q16584 847 aa8.32□□□□□ -1.08
TRAPPC13-209ENST00000508304 ZNF605Q86T29 641 aa8.32□□□□□ -1.08
TRAPPC13-209ENST00000508304 DHX38Q92620 1227 aaKnown RBP8.32□□□□□ -1.08
TRAPPC13-209ENST00000508304 PARD6AQ9NPB6 346 aa8.32□□□□□ -1.08
TRAPPC13-209ENST00000508304 KCNH3Q9ULD8 1083 aa8.32□□□□□ -1.08
TRAPPC13-209ENST00000508304 LTKP29376 864 aa8.31□□□□□ -1.08
TRAPPC13-209ENST00000508304 ZNF552Q9H707 407 aaPredicted RBP8.31□□□□□ -1.08
TRAPPC13-209ENST00000508304 AK5Q9Y6K8 562 aa8.31□□□□□ -1.08
TRAPPC13-209ENST00000508304 RNF141Q8WVD5 230 aa8.3□□□□□ -1.08
TRAPPC13-209ENST00000508304 GCM1Q9NP62 436 aa8.3□□□□□ -1.08
TRAPPC13-209ENST00000508304 CORINQ9Y5Q5 1042 aa8.3□□□□□ -1.08
TRAPPC13-209ENST00000508304 TEX51A0A1B0GUA7 166 aa8.29□□□□□ -1.08
TRAPPC13-209ENST00000508304 UPK3BL1B0FP48 263 aa8.29□□□□□ -1.08
TRAPPC13-209ENST00000508304 UPK3BL2E5RIL1 263 aa8.29□□□□□ -1.08
TRAPPC13-209ENST00000508304 PRPF40AO75400 957 aaKnown RBP8.29□□□□□ -1.08
TRAPPC13-209ENST00000508304 SHISA4Q96DD7 197 aa8.29□□□□□ -1.08
TRAPPC13-209ENST00000508304 EBF1Q9UH73 591 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms